Protein–RNA interactions for Protein: P22894

MMP8, Neutrophil collagenase, humanhuman

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP8P22894 PRKAR2B-201ENST00000265717 3745 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
MMP8P22894 H2AFY-202ENST00000312469 1859 ntTSL 5 BASIC17.01■□□□□ 0.31
MMP8P22894 PSMC3IP-204ENST00000587209 1381 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
MMP8P22894 PRAL-201ENST00000624952 3286 ntBASIC17.01■□□□□ 0.31
MMP8P22894 FAM104A-201ENST00000403627 2798 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
MMP8P22894 CCDC59-201ENST00000256151 1983 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
MMP8P22894 LUC7L3-202ENST00000393227 2284 ntTSL 1 (best) BASIC17■□□□□ 0.31
MMP8P22894 NLE1-202ENST00000442241 2588 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
MMP8P22894 RNF31-201ENST00000324103 3627 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
MMP8P22894 ARHGEF28-214ENST00000545377 6351 ntAPPRIS P3 TSL 5 BASIC17■□□□□ 0.31
MMP8P22894 CENPM-201ENST00000215980 966 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
MMP8P22894 HRCT1-201ENST00000354323 950 ntAPPRIS P1 BASIC17■□□□□ 0.31
MMP8P22894 C1orf43-202ENST00000362076 1551 ntTSL 1 (best) BASIC17■□□□□ 0.31
MMP8P22894 RNF32-204ENST00000392743 1746 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
MMP8P22894 POC1B-202ENST00000393179 3096 ntTSL 1 (best) BASIC17■□□□□ 0.31
MMP8P22894 MPL-202ENST00000413998 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
MMP8P22894 GNB2-205ENST00000419828 1285 ntTSL 5 BASIC17■□□□□ 0.31
MMP8P22894 AL136982.4-201ENST00000437689 1740 ntBASIC17■□□□□ 0.31
MMP8P22894 PRRT4-201ENST00000446477 3544 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
MMP8P22894 TMEM5-AS1-201ENST00000546214 563 ntTSL 4 BASIC17■□□□□ 0.31
MMP8P22894 NDUFS7-216ENST00000546283 1060 ntTSL 2 BASIC17■□□□□ 0.31
MMP8P22894 BNIP3P1-202ENST00000550043 1585 ntBASIC17■□□□□ 0.31
MMP8P22894 AC068594.1-203ENST00000581153 695 ntTSL 2 BASIC17■□□□□ 0.31
MMP8P22894 PPP1R18-206ENST00000615892 1448 ntTSL 1 (best) BASIC17■□□□□ 0.31
MMP8P22894 SBNO2-202ENST00000438103 4537 ntAPPRIS ALT2 TSL 2 BASIC17■□□□□ 0.31
MMP8P22894 KCND3-202ENST00000315987 2716 ntAPPRIS P4 TSL 1 (best) BASIC17■□□□□ 0.31
MMP8P22894 CHMP1A-202ENST00000535997 2295 ntTSL 2 BASIC17■□□□□ 0.31
MMP8P22894 FUT8-213ENST00000557164 2269 ntTSL 2 BASIC17■□□□□ 0.31
MMP8P22894 RBFOX3-212ENST00000584778 1547 ntAPPRIS ALT2 TSL 5 BASIC17■□□□□ 0.31
MMP8P22894 SPATA18-202ENST00000419395 2816 ntTSL 2 BASIC17■□□□□ 0.31
MMP8P22894 MECR-201ENST00000263702 1353 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
MMP8P22894 YAP1-211ENST00000629586 1365 ntTSL 5 BASIC17■□□□□ 0.31
MMP8P22894 ANKK1-201ENST00000303941 2543 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
MMP8P22894 DHX30-205ENST00000445061 4065 ntAPPRIS P2 TSL 1 (best) BASIC17■□□□□ 0.31
MMP8P22894 PHKA1-205ENST00000541944 5944 ntAPPRIS ALT1 TSL 1 (best) BASIC17■□□□□ 0.31
MMP8P22894 NAF1-201ENST00000274054 1907 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
MMP8P22894 MAPK14-201ENST00000229794 3779 ntAPPRIS P5 TSL 1 (best) BASIC17■□□□□ 0.31
MMP8P22894 CACFD1-202ENST00000316948 2794 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
MMP8P22894 SLC17A3-202ENST00000360657 1750 ntTSL 2 BASIC17■□□□□ 0.31
MMP8P22894 AC009053.1-201ENST00000566802 2320 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
MMP8P22894 MAPKAP1-202ENST00000350766 3256 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
MMP8P22894 MCF2L-208ENST00000397030 6580 ntTSL 2 BASIC16.99■□□□□ 0.31
MMP8P22894 PPP2R5D-206ENST00000472118 2963 ntAPPRIS ALT2 TSL 5 BASIC16.99■□□□□ 0.31
MMP8P22894 TRIM7-201ENST00000274773 2840 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
MMP8P22894 ZNF135-202ENST00000359978 2120 ntTSL 2 BASIC16.99■□□□□ 0.31
MMP8P22894 SSFA2-201ENST00000320370 4965 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
MMP8P22894 PRRG2-201ENST00000246794 1404 ntAPPRIS P1 TSL 2 BASIC16.99■□□□□ 0.31
MMP8P22894 MGRN1-201ENST00000262370 3968 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
MMP8P22894 DKKL1-201ENST00000221498 1222 ntAPPRIS P2 TSL 1 (best) BASIC16.99■□□□□ 0.31
MMP8P22894 ZNF593-201ENST00000270812 698 ntTSL 2 BASIC16.99■□□□□ 0.31
MMP8P22894 MRPS18A-202ENST00000372133 1062 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
MMP8P22894 MRPL28-202ENST00000389675 865 ntAPPRIS P1 TSL 3 BASIC16.99■□□□□ 0.31
MMP8P22894 AC004987.2-201ENST00000395959 1148 ntBASIC16.99■□□□□ 0.31
MMP8P22894 LINC01273-201ENST00000411453 685 ntTSL 2 BASIC16.99■□□□□ 0.31
MMP8P22894 LINC00404-201ENST00000418660 428 ntTSL 2 BASIC16.99■□□□□ 0.31
MMP8P22894 AL137003.1-201ENST00000423260 491 ntTSL 5 BASIC16.99■□□□□ 0.31
MMP8P22894 GPS2P2-201ENST00000430745 888 ntBASIC16.99■□□□□ 0.31
MMP8P22894 LINC01705-201ENST00000438158 562 ntTSL 2 BASIC16.99■□□□□ 0.31
MMP8P22894 AL732437.1-201ENST00000442008 595 ntTSL 4 BASIC16.99■□□□□ 0.31
MMP8P22894 PAEP-208ENST00000479141 990 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
MMP8P22894 PXN-AS1-202ENST00000538804 508 ntTSL 4 BASIC16.99■□□□□ 0.31
MMP8P22894 CSRP2-202ENST00000546966 754 ntAPPRIS P1 TSL 3 BASIC16.99■□□□□ 0.31
MMP8P22894 AC092718.3-202ENST00000564536 1032 ntAPPRIS P5 TSL 5 BASIC16.99■□□□□ 0.31
MMP8P22894 COQ9-214ENST00000567933 882 ntTSL 3 BASIC16.99■□□□□ 0.31
MMP8P22894 TVP23B-206ENST00000574226 1080 ntAPPRIS ALT1 TSL 1 (best) BASIC16.99■□□□□ 0.31
MMP8P22894 AC005256.1-202ENST00000592934 415 ntTSL 2 BASIC16.99■□□□□ 0.31
MMP8P22894 RDX-201ENST00000343115 4491 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
MMP8P22894 VAV2-202ENST00000371851 5101 ntAPPRIS ALT2 TSL 5 BASIC16.99■□□□□ 0.31
MMP8P22894 GK2-201ENST00000358842 1942 ntAPPRIS P1 BASIC16.99■□□□□ 0.31
MMP8P22894 ZBTB45P2-201ENST00000452245 1531 ntBASIC16.99■□□□□ 0.31
MMP8P22894 NDUFV1-216ENST00000529927 1503 ntAPPRIS ALT1 TSL 1 (best) BASIC16.99■□□□□ 0.31
MMP8P22894 SLITRK4-201ENST00000338017 3357 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
MMP8P22894 SIGLEC7-202ENST00000317643 1754 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
MMP8P22894 ASXL1-202ENST00000375687 7031 ntAPPRIS P2 TSL 5 BASIC16.99■□□□□ 0.31
MMP8P22894 TFPI2-201ENST00000222543 2444 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
MMP8P22894 LLGL2-209ENST00000578363 1393 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
MMP8P22894 DEPDC7-202ENST00000311388 2012 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
MMP8P22894 FGFR3-204ENST00000412135 3951 ntTSL 5 BASIC16.99■□□□□ 0.31
MMP8P22894 CLEC18A-203ENST00000449317 1875 ntAPPRIS ALT2 TSL 5 BASIC16.99■□□□□ 0.31
MMP8P22894 TIPRL-202ENST00000367833 3032 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
MMP8P22894 AL163636.2-201ENST00000553909 1498 ntAPPRIS P1 TSL 2 BASIC16.99■□□□□ 0.31
MMP8P22894 ADGRA1-202ENST00000392607 4283 ntAPPRIS P2 TSL 5 BASIC16.99■□□□□ 0.31
MMP8P22894 Z99756.1-201ENST00000458463 1951 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
MMP8P22894 TMPO-AS1-202ENST00000548760 3357 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
MMP8P22894 ACP2-201ENST00000256997 2203 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
MMP8P22894 IFT140-201ENST00000361339 2987 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
MMP8P22894 SERTM1-201ENST00000315190 3207 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
MMP8P22894 ELP4-219ENST00000639878 1583 ntTSL 5 BASIC16.98■□□□□ 0.31
MMP8P22894 LINC00391-201ENST00000433569 1844 ntTSL 5 BASIC16.98■□□□□ 0.31
MMP8P22894 SHISA5-210ENST00000444115 2081 ntTSL 2 BASIC16.98■□□□□ 0.31
MMP8P22894 ADAMTSL4-204ENST00000369041 2908 ntTSL 5 BASIC16.98■□□□□ 0.31
MMP8P22894 AC092198.1-201ENST00000447651 2691 ntTSL 2 BASIC16.98■□□□□ 0.31
MMP8P22894 C2orf54-202ENST00000388934 1911 ntAPPRIS P4 TSL 2 BASIC16.98■□□□□ 0.31
MMP8P22894 PTOV1-219ENST00000601638 1413 ntTSL 5 BASIC16.98■□□□□ 0.31
MMP8P22894 CTPS2-201ENST00000359276 3629 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
MMP8P22894 AC012507.2-203ENST00000415628 1765 ntTSL 3 BASIC16.98■□□□□ 0.31
MMP8P22894 CD8A-201ENST00000283635 2873 ntAPPRIS P4 TSL 1 (best) BASIC16.98■□□□□ 0.31
MMP8P22894 ARMC12-201ENST00000288065 1169 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
MMP8P22894 KRT18P32-201ENST00000424695 1287 ntBASIC16.98■□□□□ 0.31
MMP8P22894 DHDH-204ENST00000523250 634 ntTSL 5 BASIC16.98■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 39.8 ms