Protein–RNA interactions for Protein: P22001

KCNA3, Potassium voltage-gated channel subfamily A member 3, humanhuman

Predictions only

Length 575 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNA3P22001 RAB4A-201ENST00000366690 2966 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
KCNA3P22001 PCMTD2-207ENST00000609372 1321 ntTSL 4 BASIC19.56■□□□□ 0.72
KCNA3P22001 IDH3G-203ENST00000370093 1662 ntTSL 2 BASIC19.56■□□□□ 0.72
KCNA3P22001 AL138709.1-201ENST00000614840 1693 ntBASIC19.56■□□□□ 0.72
KCNA3P22001 AC009053.2-201ENST00000563701 2365 ntBASIC19.56■□□□□ 0.72
KCNA3P22001 CPT2-208ENST00000636891 2746 ntTSL 5 BASIC19.56■□□□□ 0.72
KCNA3P22001 CPT2-210ENST00000637252 2739 ntTSL 5 BASIC19.56■□□□□ 0.72
KCNA3P22001 NGLY1-207ENST00000428257 2534 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
KCNA3P22001 GTF2H2C-201ENST00000380729 1803 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
KCNA3P22001 AIRN-201ENST00000601203 4374 ntBASIC19.56■□□□□ 0.72
KCNA3P22001 MEG3-205ENST00000412736 1615 ntTSL 2 BASIC19.56■□□□□ 0.72
KCNA3P22001 MRPL34-201ENST00000252602 968 ntAPPRIS P2 TSL 1 (best) BASIC19.56■□□□□ 0.72
KCNA3P22001 CCL25-201ENST00000253451 953 ntAPPRIS ALT2 TSL 2 BASIC19.56■□□□□ 0.72
KCNA3P22001 DMAC2-202ENST00000301183 1134 ntTSL 2 BASIC19.56■□□□□ 0.72
KCNA3P22001 AC104457.1-201ENST00000401024 814 ntBASIC19.56■□□□□ 0.72
KCNA3P22001 NCBP2-203ENST00000422610 676 ntTSL 2 BASIC19.56■□□□□ 0.72
KCNA3P22001 DGCR5-204ENST00000440005 1299 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
KCNA3P22001 MTX1P1-201ENST00000440904 838 ntBASIC19.56■□□□□ 0.72
KCNA3P22001 LINC00642-202ENST00000442515 670 ntTSL 3 BASIC19.56■□□□□ 0.72
KCNA3P22001 AC012640.1-201ENST00000509915 688 ntTSL 3 BASIC19.56■□□□□ 0.72
KCNA3P22001 SLED1-202ENST00000512051 380 ntBASIC19.56■□□□□ 0.72
KCNA3P22001 FBXL8-208ENST00000521920 574 ntTSL 4 BASIC19.56■□□□□ 0.72
KCNA3P22001 C1RL-212ENST00000545337 813 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
KCNA3P22001 IGHV3OR16-9-202ENST00000558425 288 ntAPPRIS ALT2 BASIC19.56■□□□□ 0.72
KCNA3P22001 AC243562.2-201ENST00000561247 970 ntBASIC19.56■□□□□ 0.72
KCNA3P22001 AC011510.1-201ENST00000598541 286 ntTSL 3 BASIC19.56■□□□□ 0.72
KCNA3P22001 AL160412.1-202ENST00000616819 663 ntTSL 4 BASIC19.56■□□□□ 0.72
KCNA3P22001 LILRA2-208ENST00000629481 661 ntTSL 2 BASIC19.56■□□□□ 0.72
KCNA3P22001 TRAF3-204ENST00000539721 1786 ntTSL 2 BASIC19.56■□□□□ 0.72
KCNA3P22001 DRD5P1-201ENST00000456605 1438 ntBASIC19.56■□□□□ 0.72
KCNA3P22001 FLAD1-203ENST00000315144 1730 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
KCNA3P22001 MTA1-201ENST00000331320 2876 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
KCNA3P22001 ZSCAN10-202ENST00000538082 2350 ntTSL 4 BASIC19.56■□□□□ 0.72
KCNA3P22001 PGAP3-203ENST00000378011 2533 ntTSL 2 BASIC19.56■□□□□ 0.72
KCNA3P22001 PTPA-201ENST00000337738 2845 ntTSL 2 BASIC19.56■□□□□ 0.72
KCNA3P22001 SHOX2-202ENST00000425436 1513 ntTSL 5 BASIC19.56■□□□□ 0.72
KCNA3P22001 AC015818.8-201ENST00000587907 1519 ntBASIC19.56■□□□□ 0.72
KCNA3P22001 TCP11-206ENST00000412155 1690 ntAPPRIS ALT2 TSL 2 BASIC19.56■□□□□ 0.72
KCNA3P22001 AR-207ENST00000612010 3896 ntTSL 5 BASIC19.55■□□□□ 0.72
KCNA3P22001 SPATS2L-202ENST00000360760 2119 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
KCNA3P22001 MIEF2-204ENST00000395706 2441 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
KCNA3P22001 GTF2IP1-210ENST00000622829 3605 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
KCNA3P22001 TADA3-201ENST00000301964 2355 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
KCNA3P22001 SLC39A14-201ENST00000240095 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
KCNA3P22001 CGB5-201ENST00000301408 841 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
KCNA3P22001 RAPH1-201ENST00000308091 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
KCNA3P22001 RHCE-202ENST00000340849 1087 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
KCNA3P22001 SRPX-201ENST00000378533 1874 ntAPPRIS P3 TSL 1 (best) BASIC19.55■□□□□ 0.72
KCNA3P22001 C2orf48-201ENST00000381786 1897 ntTSL 2 BASIC19.55■□□□□ 0.72
KCNA3P22001 SNHG17-201ENST00000413755 648 ntTSL 3 BASIC19.55■□□□□ 0.72
KCNA3P22001 LINC01762-204ENST00000434879 436 ntTSL 2 BASIC19.55■□□□□ 0.72
KCNA3P22001 AC100810.1-201ENST00000518822 978 ntTSL 2 BASIC19.55■□□□□ 0.72
KCNA3P22001 AC025259.3-202ENST00000564363 687 ntTSL 2 BASIC19.55■□□□□ 0.72
KCNA3P22001 GDF10-201ENST00000580279 2458 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
KCNA3P22001 AC011447.3-204ENST00000585498 883 ntTSL 2 BASIC19.55■□□□□ 0.72
KCNA3P22001 MFSD11-218ENST00000591864 446 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
KCNA3P22001 FBXL12-212ENST00000592067 879 ntTSL 2 BASIC19.55■□□□□ 0.72
KCNA3P22001 SMCO4-206ENST00000596676 180 ntAPPRIS P1 BASIC19.55■□□□□ 0.72
KCNA3P22001 AL451050.2-201ENST00000606967 682 ntBASIC19.55■□□□□ 0.72
KCNA3P22001 AC138951.2-201ENST00000623455 1161 ntBASIC19.55■□□□□ 0.72
KCNA3P22001 NOMO2-201ENST00000330537 4352 ntAPPRIS ALT2 TSL 5 BASIC19.55■□□□□ 0.72
KCNA3P22001 GPSM2-201ENST00000264126 3032 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
KCNA3P22001 MZF1-206ENST00000599369 2587 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
KCNA3P22001 MCCC1-214ENST00000610757 2410 ntTSL 5 BASIC19.55■□□□□ 0.72
KCNA3P22001 ZBTB32-201ENST00000262630 1960 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
KCNA3P22001 PTGER3-208ENST00000370932 1841 ntAPPRIS ALT2 TSL 5 BASIC19.55■□□□□ 0.72
KCNA3P22001 PDE6G-204ENST00000573076 1505 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
KCNA3P22001 NFIX-214ENST00000592199 1509 ntTSL 5 BASIC19.55■□□□□ 0.72
KCNA3P22001 TLE3-201ENST00000317509 5207 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
KCNA3P22001 LGALS12-205ENST00000425950 1789 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
KCNA3P22001 CFLAR-205ENST00000342795 1613 ntTSL 5 BASIC19.54■□□□□ 0.72
KCNA3P22001 RHOU-201ENST00000366691 4372 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
KCNA3P22001 WNT8B-201ENST00000343737 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
KCNA3P22001 PRODH-202ENST00000334029 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
KCNA3P22001 ATG10-202ENST00000355178 1438 ntTSL 2 BASIC19.54■□□□□ 0.72
KCNA3P22001 SERPINH1-201ENST00000358171 2225 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
KCNA3P22001 CACNG5-201ENST00000307139 926 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
KCNA3P22001 CSH2-201ENST00000336844 1173 ntTSL 2 BASIC19.54■□□□□ 0.72
KCNA3P22001 CSH2-202ENST00000345366 598 ntTSL 5 BASIC19.54■□□□□ 0.72
KCNA3P22001 HIST3H3-201ENST00000366696 481 ntAPPRIS P1 BASIC19.54■□□□□ 0.72
KCNA3P22001 PPIE-203ENST00000372830 1198 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
KCNA3P22001 ZNF593-202ENST00000374266 675 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
KCNA3P22001 HNRNPA1P32-201ENST00000396326 963 ntBASIC19.54■□□□□ 0.72
KCNA3P22001 TMEM107-203ENST00000431792 455 ntTSL 3 BASIC19.54■□□□□ 0.72
KCNA3P22001 PCDHGC3-204ENST00000617222 731 ntTSL 3 BASIC19.54■□□□□ 0.72
KCNA3P22001 AC132938.4-201ENST00000623835 848 ntBASIC19.54■□□□□ 0.72
KCNA3P22001 TEKT4-201ENST00000295201 1505 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
KCNA3P22001 LITAF-202ENST00000381810 1527 ntTSL 5 BASIC19.54■□□□□ 0.72
KCNA3P22001 WDTC1-201ENST00000319394 4819 ntAPPRIS ALT1 TSL 1 (best) BASIC19.54■□□□□ 0.72
KCNA3P22001 KLHL17-201ENST00000338591 2560 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
KCNA3P22001 ZNF274-202ENST00000345813 2678 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
KCNA3P22001 TMED3-203ENST00000536821 2265 ntTSL 2 BASIC19.54■□□□□ 0.72
KCNA3P22001 LGI3-201ENST00000306317 3272 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
KCNA3P22001 GABARAPL1-205ENST00000539170 1700 ntTSL 3 BASIC19.54■□□□□ 0.72
KCNA3P22001 LEMD2-214ENST00000614475 2883 ntAPPRIS P1 TSL 5 BASIC19.54■□□□□ 0.72
KCNA3P22001 PCCA-203ENST00000376286 2481 ntTSL 2 BASIC19.53■□□□□ 0.72
KCNA3P22001 CDC25B-204ENST00000379598 2990 ntTSL 2 BASIC19.53■□□□□ 0.72
KCNA3P22001 AC092978.1-201ENST00000474979 1309 ntTSL 5 BASIC19.53■□□□□ 0.72
KCNA3P22001 AC092978.1-202ENST00000637590 1327 ntBASIC19.53■□□□□ 0.72
KCNA3P22001 PRPF38B-202ENST00000370022 1591 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 34.6 ms