Protein–RNA interactions for Protein: P17600

SYN1, Synapsin-1, humanhuman

Predictions only

Length 705 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYN1P17600 CYB561A3-219ENST00000544118 1136 ntTSL 5 BASIC17.43■□□□□ 0.38
SYN1P17600 AC012645.3-203ENST00000567153 520 ntTSL 2 BASIC17.43■□□□□ 0.38
SYN1P17600 AC005523.1-201ENST00000598782 418 ntTSL 5 BASIC17.43■□□□□ 0.38
SYN1P17600 AL096828.3-201ENST00000615354 462 ntBASIC17.43■□□□□ 0.38
SYN1P17600 CHI3L2-212ENST00000524472 1435 ntTSL 2 BASIC17.43■□□□□ 0.38
SYN1P17600 CD9-203ENST00000382518 1556 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
SYN1P17600 PHGDH-202ENST00000369409 1882 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
SYN1P17600 PTHLH-205ENST00000535992 1891 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
SYN1P17600 SMPD1-201ENST00000342245 2452 ntAPPRIS ALT1 TSL 1 (best) BASIC17.43■□□□□ 0.38
SYN1P17600 VIPR1-201ENST00000325123 2773 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
SYN1P17600 PEPD-202ENST00000397032 1754 ntTSL 2 BASIC17.43■□□□□ 0.38
SYN1P17600 SP140L-204ENST00000444636 1781 ntTSL 5 BASIC17.43■□□□□ 0.38
SYN1P17600 TSEN2-207ENST00000454502 1909 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
SYN1P17600 MTSS1L-204ENST00000616026 2241 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
SYN1P17600 HSPA4-205ENST00000617074 2358 ntTSL 5 BASIC17.43■□□□□ 0.38
SYN1P17600 TRIM33-201ENST00000358465 8339 ntAPPRIS P4 TSL 1 (best) BASIC17.42■□□□□ 0.38
SYN1P17600 PACS1-209ENST00000529757 1688 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
SYN1P17600 KLK10-202ENST00000358789 1508 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
SYN1P17600 MYOZ1-201ENST00000359322 1541 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
SYN1P17600 ADORA1-202ENST00000337894 2919 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
SYN1P17600 DDX17-211ENST00000640332 2190 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
SYN1P17600 DDX17-212ENST00000640668 2196 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
SYN1P17600 ROCK2-209ENST00000616279 6401 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
SYN1P17600 COMMD5-203ENST00000450361 1573 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
SYN1P17600 FDPS-202ENST00000368356 1431 ntAPPRIS P3 TSL 2 BASIC17.42■□□□□ 0.38
SYN1P17600 MRPL34-201ENST00000252602 968 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
SYN1P17600 AC006001.1-201ENST00000325130 474 ntBASIC17.42■□□□□ 0.38
SYN1P17600 TNFAIP8L2-201ENST00000368910 1178 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
SYN1P17600 HIST2H2AA3-201ENST00000369159 549 ntAPPRIS P1 BASIC17.42■□□□□ 0.38
SYN1P17600 PSTK-202ENST00000405485 1047 ntAPPRIS P2 TSL 2 BASIC17.42■□□□□ 0.38
SYN1P17600 KRTAP19-9P-201ENST00000421795 191 ntBASIC17.42■□□□□ 0.38
SYN1P17600 GDAP1-202ENST00000434412 1228 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
SYN1P17600 AC244250.1-201ENST00000438185 451 ntTSL 2 BASIC17.42■□□□□ 0.38
SYN1P17600 TARDBPP1-201ENST00000442013 1203 ntBASIC17.42■□□□□ 0.38
SYN1P17600 FTLP10-202ENST00000505798 471 ntBASIC17.42■□□□□ 0.38
SYN1P17600 AC008438.1-201ENST00000507521 549 ntTSL 2 BASIC17.42■□□□□ 0.38
SYN1P17600 AC245884.6-201ENST00000515672 1067 ntBASIC17.42■□□□□ 0.38
SYN1P17600 AC124301.1-201ENST00000524885 602 ntTSL 3 BASIC17.42■□□□□ 0.38
SYN1P17600 RAB30-AS1-207ENST00000533708 825 ntTSL 2 BASIC17.42■□□□□ 0.38
SYN1P17600 AC124947.2-201ENST00000547118 1133 ntBASIC17.42■□□□□ 0.38
SYN1P17600 AC025279.2-201ENST00000569730 653 ntBASIC17.42■□□□□ 0.38
SYN1P17600 LRRC37A6P-204ENST00000575554 573 ntTSL 3 BASIC17.42■□□□□ 0.38
SYN1P17600 CCDC144NL-AS1-209ENST00000577860 884 ntTSL 5 BASIC17.42■□□□□ 0.38
SYN1P17600 ANAPC11-215ENST00000578550 599 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
SYN1P17600 TMEM205-216ENST00000593256 792 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
SYN1P17600 Metazoa_SRP.69-201ENST00000615730 281 ntBASIC17.42■□□□□ 0.38
SYN1P17600 AL137026.1-201ENST00000624407 503 ntTSL 4 BASIC17.42■□□□□ 0.38
SYN1P17600 ARHGAP26-201ENST00000274498 6862 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
SYN1P17600 PCGF1-201ENST00000233630 1792 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
SYN1P17600 GOLIM4-201ENST00000309027 2100 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
SYN1P17600 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
SYN1P17600 U73166.1-201ENST00000439898 2625 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
SYN1P17600 PLEKHG5-212ENST00000537245 4794 ntAPPRIS ALT2 TSL 2 BASIC17.42■□□□□ 0.38
SYN1P17600 ANKRD10-201ENST00000267339 2495 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
SYN1P17600 TMEM161A-201ENST00000162044 1820 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
SYN1P17600 CT62-201ENST00000449977 1825 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
SYN1P17600 SLC39A13-213ENST00000533076 1805 ntTSL 2 BASIC17.42■□□□□ 0.38
SYN1P17600 GALNT14-201ENST00000324589 2169 ntTSL 2 BASIC17.42■□□□□ 0.38
SYN1P17600 AGFG1-202ENST00000373671 1669 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
SYN1P17600 CYP11A1-202ENST00000358632 2001 ntTSL 2 BASIC17.42■□□□□ 0.38
SYN1P17600 AC018735.1-201ENST00000437208 1502 ntBASIC17.42■□□□□ 0.38
SYN1P17600 LONP1-201ENST00000360614 3236 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
SYN1P17600 ZNF131-206ENST00000505606 3209 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
SYN1P17600 ATP6V1C2-201ENST00000272238 1565 ntTSL 5 BASIC17.41■□□□□ 0.38
SYN1P17600 MAGI3-203ENST00000369615 6508 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
SYN1P17600 SLC35F5-201ENST00000245680 4412 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
SYN1P17600 GFOD2-201ENST00000268797 2126 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
SYN1P17600 WLS-205ENST00000370976 2332 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
SYN1P17600 CCDC177-201ENST00000599174 4131 ntAPPRIS P1 TSL 3 BASIC17.41■□□□□ 0.38
SYN1P17600 ZCCHC23-201ENST00000500526 1951 ntTSL 2 BASIC17.41■□□□□ 0.38
SYN1P17600 FLVCR1-AS1-201ENST00000356684 2525 ntTSL 2 BASIC17.41■□□□□ 0.38
SYN1P17600 USP27X-AS1-201ENST00000437322 2175 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
SYN1P17600 SLURP2-201ENST00000317543 599 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
SYN1P17600 RNASE10-201ENST00000328444 717 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
SYN1P17600 CSH2-201ENST00000336844 1173 ntTSL 2 BASIC17.41■□□□□ 0.38
SYN1P17600 TSHR-202ENST00000342443 1281 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
SYN1P17600 CSH2-202ENST00000345366 598 ntTSL 5 BASIC17.41■□□□□ 0.38
SYN1P17600 PGGT1B-202ENST00000379615 903 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
SYN1P17600 DEF8-202ENST00000418391 852 ntTSL 2 BASIC17.41■□□□□ 0.38
SYN1P17600 LINC01067-201ENST00000432575 664 ntTSL 3 BASIC17.41■□□□□ 0.38
SYN1P17600 PCOLCE2-208ENST00000485766 1088 ntTSL 5 BASIC17.41■□□□□ 0.38
SYN1P17600 UCHL1-207ENST00000508768 827 ntTSL 3 BASIC17.41■□□□□ 0.38
SYN1P17600 TPO-215ENST00000539820 1157 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
SYN1P17600 C1RL-212ENST00000545337 813 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
SYN1P17600 AC025154.2-203ENST00000550214 1031 ntTSL 2 BASIC17.41■□□□□ 0.38
SYN1P17600 AC007861.2-201ENST00000573819 571 ntTSL 4 BASIC17.41■□□□□ 0.38
SYN1P17600 AC011474.2-201ENST00000579268 543 ntTSL 3 BASIC17.41■□□□□ 0.38
SYN1P17600 NDUFV2P1-201ENST00000596415 907 ntBASIC17.41■□□□□ 0.38
SYN1P17600 AC008763.1-201ENST00000601797 843 ntTSL 3 BASIC17.41■□□□□ 0.38
SYN1P17600 NOMO2-201ENST00000330537 4352 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
SYN1P17600 NEURL1B-201ENST00000369800 6424 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
SYN1P17600 ZNRD1ASP-217ENST00000437417 1497 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
SYN1P17600 ACAP3-202ENST00000354700 3896 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
SYN1P17600 ACSF2-201ENST00000300441 2235 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
SYN1P17600 DDX31-201ENST00000310532 2408 ntTSL 2 BASIC17.41■□□□□ 0.38
SYN1P17600 GGA1-203ENST00000343632 3159 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
SYN1P17600 LUC7L2-202ENST00000354926 2645 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
SYN1P17600 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
SYN1P17600 PRSS36-201ENST00000268281 2840 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
SYN1P17600 AL031731.1-201ENST00000642131 2094 ntBASIC17.41■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 27 ms