Protein–RNA interactions for Protein: P09326

CD48, CD48 antigen, humanhuman

Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD48P09326 KCTD20-202ENST00000373731 5619 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CD48P09326 CCDC59-201ENST00000256151 1983 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CD48P09326 LUC7L3-202ENST00000393227 2284 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
CD48P09326 AKR1B15-202ENST00000457545 1621 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
CD48P09326 CCDC136-212ENST00000487361 2268 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
CD48P09326 CHMP1A-202ENST00000535997 2295 ntTSL 2 BASIC16.79■□□□□ 0.28
CD48P09326 SYT15-202ENST00000374323 6428 ntTSL 2 BASIC16.79■□□□□ 0.28
CD48P09326 ZFAND2B-207ENST00000409412 569 ntTSL 2 BASIC16.79■□□□□ 0.28
CD48P09326 PIK3CD-AS2-201ENST00000415330 939 ntTSL 5 BASIC16.79■□□□□ 0.28
CD48P09326 AC062015.1-201ENST00000423838 1134 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
CD48P09326 CR559946.1-201ENST00000453835 531 ntTSL 4 BASIC16.79■□□□□ 0.28
CD48P09326 AC009567.1-201ENST00000515071 525 ntTSL 4 BASIC16.79■□□□□ 0.28
CD48P09326 HELT-204ENST00000515777 841 ntAPPRIS P4 TSL 1 (best) BASIC16.79■□□□□ 0.28
CD48P09326 FAM86C2P-203ENST00000528684 1004 ntBASIC16.79■□□□□ 0.28
CD48P09326 AC131009.1-201ENST00000539078 426 ntTSL 5 BASIC16.79■□□□□ 0.28
CD48P09326 AC006116.8-201ENST00000587004 987 ntTSL 2 BASIC16.79■□□□□ 0.28
CD48P09326 SSH2-211ENST00000590153 570 ntTSL 4 BASIC16.79■□□□□ 0.28
CD48P09326 AC020934.3-201ENST00000639810 348 ntAPPRIS P1 TSL 3 BASIC16.79■□□□□ 0.28
CD48P09326 PDZD4-202ENST00000393758 3763 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
CD48P09326 SSFA2-201ENST00000320370 4965 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
CD48P09326 ZMYND11-208ENST00000397962 2150 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CD48P09326 NELFA-203ENST00000411638 2199 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CD48P09326 PITPNM2-AS1-201ENST00000506255 2191 ntTSL 2 BASIC16.79■□□□□ 0.28
CD48P09326 ELFN1-202ENST00000561626 3742 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
CD48P09326 FAM181A-201ENST00000267594 1816 ntTSL 2 BASIC16.79■□□□□ 0.28
CD48P09326 ALOX15B-205ENST00000573359 1809 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
CD48P09326 RNF169-201ENST00000299563 7823 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CD48P09326 TRAF3-204ENST00000539721 1786 ntTSL 2 BASIC16.79■□□□□ 0.28
CD48P09326 UNC119B-201ENST00000344651 4404 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
CD48P09326 RNF34-202ENST00000392464 1722 ntTSL 5 BASIC16.79■□□□□ 0.28
CD48P09326 MIEF1-202ENST00000402881 2269 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
CD48P09326 RGS20-201ENST00000276500 1664 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CD48P09326 SCPEP1-201ENST00000262288 1942 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CD48P09326 SATB2-202ENST00000417098 5730 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
CD48P09326 NOTO-201ENST00000398468 2749 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
CD48P09326 SLC29A1-209ENST00000427851 2171 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CD48P09326 CCDC144B-202ENST00000445752 2197 ntTSL 2 BASIC16.78■□□□□ 0.28
CD48P09326 PRX-202ENST00000324001 4855 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
CD48P09326 AC100803.3-201ENST00000606664 2961 ntTSL 5 BASIC16.78■□□□□ 0.28
CD48P09326 SPDEF-202ENST00000544425 1866 ntAPPRIS ALT1 TSL 2 BASIC16.78■□□□□ 0.28
CD48P09326 MED26-201ENST00000263390 3174 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CD48P09326 SFXN1-201ENST00000321442 4231 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CD48P09326 SEPT11-203ENST00000502584 2615 ntAPPRIS ALT1 TSL 5 BASIC16.78■□□□□ 0.28
CD48P09326 CES1-202ENST00000361503 1835 ntAPPRIS ALT1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CD48P09326 MGEA5-202ENST00000361464 5155 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CD48P09326 ANTXR1-201ENST00000303714 5859 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CD48P09326 NFATC1-207ENST00000545796 3558 ntTSL 2 BASIC16.78■□□□□ 0.28
CD48P09326 FIGLA-201ENST00000332372 722 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CD48P09326 HIST1H4J-201ENST00000355057 373 ntAPPRIS P1 BASIC16.78■□□□□ 0.28
CD48P09326 MIR346-201ENST00000362234 95 ntBASIC16.78■□□□□ 0.28
CD48P09326 ZNF593-202ENST00000374266 675 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CD48P09326 AC245100.5-201ENST00000452108 331 ntBASIC16.78■□□□□ 0.28
CD48P09326 AL669831.5-202ENST00000457084 566 ntTSL 4 BASIC16.78■□□□□ 0.28
CD48P09326 RN7SL589P-201ENST00000481268 310 ntBASIC16.78■□□□□ 0.28
CD48P09326 AC093714.2-201ENST00000489626 763 ntTSL 3 BASIC16.78■□□□□ 0.28
CD48P09326 AL138781.1-202ENST00000563018 775 ntTSL 3 BASIC16.78■□□□□ 0.28
CD48P09326 AP000842.3-202ENST00000569238 1080 ntBASIC16.78■□□□□ 0.28
CD48P09326 AC099811.2-203ENST00000592574 958 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
CD48P09326 AC008761.1-201ENST00000595363 217 ntTSL 5 BASIC16.78■□□□□ 0.28
CD48P09326 RNPS1-223ENST00000568631 1792 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
CD48P09326 SLC7A5-201ENST00000261622 4537 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CD48P09326 GUCD1-204ENST00000407471 3482 ntAPPRIS P3 TSL 5 BASIC16.78■□□□□ 0.28
CD48P09326 MRPS21-201ENST00000581066 1462 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CD48P09326 HSPA12B-201ENST00000254963 3151 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CD48P09326 EVC2-202ENST00000344408 4390 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
CD48P09326 LINC00094-205ENST00000603928 5722 ntAPPRIS ALT2 TSL 2 BASIC16.78■□□□□ 0.28
CD48P09326 CLEC18A-203ENST00000449317 1875 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
CD48P09326 ABCB6-201ENST00000265316 3016 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CD48P09326 SURF4-202ENST00000371989 2984 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
CD48P09326 PCBP4-202ENST00000355852 2015 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
CD48P09326 TP73-208ENST00000378295 5188 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
CD48P09326 CERCAM-213ENST00000612334 1554 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.28
CD48P09326 SIGLEC7-202ENST00000317643 1754 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
CD48P09326 EGFR-203ENST00000344576 2864 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
CD48P09326 ZNF512B-201ENST00000369888 5919 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
CD48P09326 RAI1-201ENST00000353383 7662 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.28
CD48P09326 PCDHB6-202ENST00000622991 2608 ntTSL 2 BASIC16.77■□□□□ 0.28
CD48P09326 ADSL-220ENST00000636714 1734 ntAPPRIS ALT1 TSL 5 BASIC16.77■□□□□ 0.28
CD48P09326 CCNL1-201ENST00000295925 549 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
CD48P09326 ITGA9-AS1-201ENST00000366441 895 ntTSL 3 BASIC16.77■□□□□ 0.28
CD48P09326 HRAS-204ENST00000417302 1233 ntTSL 5 BASIC16.77■□□□□ 0.28
CD48P09326 MKNK2P1-201ENST00000437526 628 ntBASIC16.77■□□□□ 0.28
CD48P09326 SS18L2-202ENST00000447630 1047 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.28
CD48P09326 HRAS-205ENST00000451590 1151 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.28
CD48P09326 RAB7A-204ENST00000483906 533 ntTSL 3 BASIC16.77■□□□□ 0.28
CD48P09326 AC069335.1-201ENST00000489972 472 ntBASIC16.77■□□□□ 0.28
CD48P09326 EHMT1-216ENST00000493484 1182 ntTSL 3 BASIC16.77■□□□□ 0.28
CD48P09326 AGGF1-204ENST00000506806 1142 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
CD48P09326 AP001107.2-202ENST00000528650 480 ntTSL 3 BASIC16.77■□□□□ 0.28
CD48P09326 GMDS-AS1-205ENST00000529893 900 ntTSL 5 BASIC16.77■□□□□ 0.28
CD48P09326 AC090515.4-201ENST00000558042 450 ntTSL 3 BASIC16.77■□□□□ 0.28
CD48P09326 TNFRSF13B-203ENST00000579315 600 ntAPPRIS ALT2 TSL 3 BASIC16.77■□□□□ 0.28
CD48P09326 AC009630.3-201ENST00000581909 729 ntTSL 5 BASIC16.77■□□□□ 0.28
CD48P09326 FXYD1-208ENST00000589209 428 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.28
CD48P09326 FXYD1-211ENST00000612146 690 ntAPPRIS P1 TSL 3 BASIC16.77■□□□□ 0.28
CD48P09326 LINC00623-204ENST00000617702 746 ntTSL 5 BASIC16.77■□□□□ 0.28
CD48P09326 STAT1-202ENST00000392322 2716 ntAPPRIS ALT1 TSL 1 (best) BASIC16.77■□□□□ 0.28
CD48P09326 APBB2-204ENST00000502841 1681 ntTSL 2 BASIC16.77■□□□□ 0.28
CD48P09326 NSUN5-203ENST00000428206 2269 ntAPPRIS ALT2 TSL 2 BASIC16.77■□□□□ 0.27
CD48P09326 ACOX3-203ENST00000503233 2253 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 29.5 ms