Protein–RNA interactions for Protein: P06753

TPM3, Tropomyosin alpha-3 chain, humanhuman

Predictions only

Length 285 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3P06753 TSPAN12-202ENST00000415871 1495 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
TPM3P06753 NCK2-203ENST00000393349 2371 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
TPM3P06753 ZNF280D-207ENST00000559237 4902 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
TPM3P06753 C6orf223-201ENST00000336600 3581 ntAPPRIS P2 TSL 1 (best) BASIC18.25■□□□□ 0.51
TPM3P06753 M6PR-202ENST00000536844 2305 ntTSL 3 BASIC18.24■□□□□ 0.51
TPM3P06753 AKIRIN1-201ENST00000372984 1330 ntTSL 2 BASIC18.24■□□□□ 0.51
TPM3P06753 VWF-201ENST00000261405 8838 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
TPM3P06753 AZIN2-203ENST00000373441 1443 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
TPM3P06753 DZIP1-204ENST00000376829 3738 ntAPPRIS P4 TSL 1 (best) BASIC18.24■□□□□ 0.51
TPM3P06753 KIAA1468-201ENST00000256858 5579 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
TPM3P06753 COG3-201ENST00000349995 4498 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
TPM3P06753 SYT13-201ENST00000020926 5144 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
TPM3P06753 NUP98-201ENST00000324932 6973 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
TPM3P06753 DEPDC5-203ENST00000400242 2395 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
TPM3P06753 RNF32-204ENST00000392743 1746 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
TPM3P06753 POU5F1-204ENST00000471529 1723 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
TPM3P06753 STAT5A-211ENST00000590949 3318 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
TPM3P06753 PRMT2-201ENST00000291705 1011 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
TPM3P06753 ASGR1-202ENST00000380920 944 ntTSL 3 BASIC18.24■□□□□ 0.51
TPM3P06753 MDK-205ENST00000405308 1166 ntAPPRIS P2 TSL 2 BASIC18.24■□□□□ 0.51
TPM3P06753 BX005266.1-201ENST00000473402 457 ntBASIC18.24■□□□□ 0.51
TPM3P06753 AP000867.3-201ENST00000524675 377 ntBASIC18.24■□□□□ 0.51
TPM3P06753 ERCC5-207ENST00000535557 1125 ntTSL 5 BASIC18.24■□□□□ 0.51
TPM3P06753 AC092338.2-202ENST00000567158 611 ntTSL 5 BASIC18.24■□□□□ 0.51
TPM3P06753 EEF2KMT-206ENST00000587133 873 ntAPPRIS ALT2 TSL 3 BASIC18.24■□□□□ 0.51
TPM3P06753 AC064862.7-201ENST00000604520 867 ntBASIC18.24■□□□□ 0.51
TPM3P06753 AL591684.3-201ENST00000605187 298 ntBASIC18.24■□□□□ 0.51
TPM3P06753 AC010654.1-201ENST00000615722 808 ntBASIC18.24■□□□□ 0.51
TPM3P06753 AC116407.4-201ENST00000623319 1061 ntBASIC18.24■□□□□ 0.51
TPM3P06753 LAPTM5-201ENST00000294507 2223 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
TPM3P06753 CCZ1-207ENST00000628813 2218 ntTSL 2 BASIC18.24■□□□□ 0.51
TPM3P06753 AC009053.1-201ENST00000566802 2320 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
TPM3P06753 AC026748.1-201ENST00000624349 3251 ntBASIC18.24■□□□□ 0.51
TPM3P06753 THTPA-203ENST00000554789 1595 ntTSL 2 BASIC18.24■□□□□ 0.51
TPM3P06753 SNX11-202ENST00000393405 2733 ntAPPRIS P1 TSL 2 BASIC18.24■□□□□ 0.51
TPM3P06753 LETM2-201ENST00000297720 1693 ntTSL 2 BASIC18.24■□□□□ 0.51
TPM3P06753 MAP7D1-203ENST00000373150 3238 ntAPPRIS ALT2 TSL 2 BASIC18.24■□□□□ 0.51
TPM3P06753 ARIH2-205ENST00000449376 2278 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
TPM3P06753 LMF2-201ENST00000216080 2658 ntTSL 2 BASIC18.24■□□□□ 0.51
TPM3P06753 SDCBP2-202ENST00000360779 1519 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
TPM3P06753 OR2I1P-210ENST00000642037 4691 ntBASIC18.23■□□□□ 0.51
TPM3P06753 ZNF568-203ENST00000427117 1827 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
TPM3P06753 MAGEA2-201ENST00000595583 1830 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
TPM3P06753 TFAP2A-201ENST00000319516 2035 ntTSL 5 BASIC18.23■□□□□ 0.51
TPM3P06753 NDRG2-202ENST00000298687 2122 ntAPPRIS P4 TSL 1 (best) BASIC18.23■□□□□ 0.51
TPM3P06753 RGPD6-202ENST00000330331 2848 ntTSL 2 BASIC18.23■□□□□ 0.51
TPM3P06753 RGPD8-202ENST00000330575 2848 ntTSL 2 BASIC18.23■□□□□ 0.51
TPM3P06753 AC023908.3-201ENST00000564211 3047 ntBASIC18.23■□□□□ 0.51
TPM3P06753 GRAMD2B-217ENST00000515200 3109 ntTSL 5 BASIC18.23■□□□□ 0.51
TPM3P06753 TNS2-201ENST00000314250 5010 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
TPM3P06753 ZNF365-205ENST00000395254 4173 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
TPM3P06753 MEN1-207ENST00000377326 3150 ntAPPRIS ALT1 TSL 5 BASIC18.23■□□□□ 0.51
TPM3P06753 ASCL1-201ENST00000266744 2472 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
TPM3P06753 ABCB8-221ENST00000498578 2350 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
TPM3P06753 PES1-202ENST00000354694 2295 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
TPM3P06753 PAX3-206ENST00000392070 2258 ntAPPRIS P4 TSL 1 (best) BASIC18.23■□□□□ 0.51
TPM3P06753 GALNT14-201ENST00000324589 2169 ntTSL 2 BASIC18.23■□□□□ 0.51
TPM3P06753 AC087481.3-201ENST00000602886 1894 ntBASIC18.23■□□□□ 0.51
TPM3P06753 MSMO1-202ENST00000393766 1789 ntTSL 2 BASIC18.23■□□□□ 0.51
TPM3P06753 LGALS12-201ENST00000255684 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
TPM3P06753 CCDC181-206ENST00000491570 1652 ntTSL 2 BASIC18.23■□□□□ 0.51
TPM3P06753 TM2D3-201ENST00000333202 1381 ntAPPRIS P4 TSL 1 (best) BASIC18.23■□□□□ 0.51
TPM3P06753 NUS1P2-201ENST00000417358 873 ntBASIC18.23■□□□□ 0.51
TPM3P06753 FOXD3-AS1-201ENST00000418244 941 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
TPM3P06753 FAM86EP-206ENST00000510506 987 ntBASIC18.23■□□□□ 0.51
TPM3P06753 SELENOS-203ENST00000526049 1188 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
TPM3P06753 ANKRD29-202ENST00000585908 846 ntTSL 2 BASIC18.23■□□□□ 0.51
TPM3P06753 AC087289.1-201ENST00000586808 890 ntTSL 5 BASIC18.23■□□□□ 0.51
TPM3P06753 CCDC61-202ENST00000594087 1017 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
TPM3P06753 CYP2A7P1-201ENST00000595391 815 ntBASIC18.23■□□□□ 0.51
TPM3P06753 TUBB4A-209ENST00000598006 565 ntTSL 2 BASIC18.23■□□□□ 0.51
TPM3P06753 AC099336.1-202ENST00000602961 463 ntBASIC18.23■□□□□ 0.51
TPM3P06753 AL139288.1-201ENST00000623748 933 ntBASIC18.23■□□□□ 0.51
TPM3P06753 DCAKD-201ENST00000310604 2122 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
TPM3P06753 CELF4-223ENST00000603232 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC18.23■□□□□ 0.51
TPM3P06753 DSEL-201ENST00000310045 9531 ntAPPRIS P1 TSL 2 BASIC18.23■□□□□ 0.51
TPM3P06753 SCAP-215ENST00000545718 2950 ntTSL 5 BASIC18.23■□□□□ 0.51
TPM3P06753 MED16-207ENST00000589119 2772 ntAPPRIS P2 TSL 1 (best) BASIC18.23■□□□□ 0.51
TPM3P06753 CDIP1-207ENST00000564828 1636 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
TPM3P06753 LOX-206ENST00000639739 1626 ntTSL 5 BASIC18.23■□□□□ 0.51
TPM3P06753 KRT82-201ENST00000257974 2664 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
TPM3P06753 MMP2-201ENST00000219070 3741 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
TPM3P06753 SNTG2-202ENST00000407292 1436 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
TPM3P06753 ACY1-206ENST00000476351 1409 ntTSL 3 BASIC18.23■□□□□ 0.51
TPM3P06753 MINDY2-203ENST00000559228 9238 ntAPPRIS P3 TSL 2 BASIC18.22■□□□□ 0.51
TPM3P06753 MAX-204ENST00000358402 1973 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
TPM3P06753 CASC3-201ENST00000264645 4116 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
TPM3P06753 RNH1-204ENST00000397614 1864 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
TPM3P06753 TEN1-CDK3-202ENST00000569284 3287 ntAPPRIS P1 TSL 2 BASIC18.22■□□□□ 0.51
TPM3P06753 COMMD6-203ENST00000377615 1793 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
TPM3P06753 RNF11-201ENST00000242719 3084 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
TPM3P06753 PTPN9-206ENST00000618819 7813 ntAPPRIS P2 TSL 1 (best) BASIC18.22■□□□□ 0.51
TPM3P06753 TPM1-201ENST00000267996 1670 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
TPM3P06753 TPM1-219ENST00000559397 1655 ntTSL 2 BASIC18.22■□□□□ 0.51
TPM3P06753 LINC01118-203ENST00000479311 1588 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
TPM3P06753 HMBS-209ENST00000537841 1559 ntTSL 5 BASIC18.22■□□□□ 0.51
TPM3P06753 AC073957.2-201ENST00000549241 1562 ntTSL 4 BASIC18.22■□□□□ 0.51
TPM3P06753 AL353732.1-201ENST00000569618 1459 ntBASIC18.22■□□□□ 0.51
TPM3P06753 SNPH-202ENST00000381873 4995 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
TPM3P06753 SLC37A1-201ENST00000352133 3664 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 53.2 ms