Protein–RNA interactions for Protein: P03897

MT-ND3, NADH-ubiquinone oxidoreductase chain 3, humanhuman

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-ND3P03897 SPATC1-201ENST00000377470 2007 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
MT-ND3P03897 ELFN1-201ENST00000424383 3845 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
MT-ND3P03897 SLC5A7-201ENST00000264047 5152 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
MT-ND3P03897 PARVB-203ENST00000404989 1591 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
MT-ND3P03897 PARVB-204ENST00000406477 1569 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
MT-ND3P03897 LINC00894-202ENST00000425602 1597 ntTSL 2 BASIC16.6■□□□□ 0.25
MT-ND3P03897 OSBPL6-203ENST00000357080 2217 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
MT-ND3P03897 LETM2-201ENST00000297720 1693 ntTSL 2 BASIC16.59■□□□□ 0.25
MT-ND3P03897 PPA2-201ENST00000341695 1684 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
MT-ND3P03897 PRMT1-217ENST00000532489 1686 ntTSL 5 BASIC16.59■□□□□ 0.25
MT-ND3P03897 DAGLB-204ENST00000436575 2385 ntTSL 2 BASIC16.59■□□□□ 0.25
MT-ND3P03897 TMPRSS2-206ENST00000458356 1701 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
MT-ND3P03897 WDR74-204ENST00000525239 1736 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
MT-ND3P03897 ORAOV1-201ENST00000279147 2478 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
MT-ND3P03897 TOPAZ1-201ENST00000309765 5334 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
MT-ND3P03897 CXCL14-202ENST00000512158 1760 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
MT-ND3P03897 YARS-201ENST00000373477 3238 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
MT-ND3P03897 COTL1-201ENST00000262428 1843 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
MT-ND3P03897 ACBD5-202ENST00000375897 4173 ntAPPRIS ALT2 TSL 2 BASIC16.59■□□□□ 0.25
MT-ND3P03897 KITLG-202ENST00000347404 1948 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
MT-ND3P03897 AKAP12-201ENST00000253332 6597 ntAPPRIS P4 TSL 1 (best) BASIC16.59■□□□□ 0.25
MT-ND3P03897 CNPPD1-202ENST00000409789 2073 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
MT-ND3P03897 CST3-201ENST00000376925 873 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
MT-ND3P03897 ITM2B-201ENST00000378549 805 ntTSL 5 BASIC16.59■□□□□ 0.25
MT-ND3P03897 ATP5G3-202ENST00000392541 842 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
MT-ND3P03897 DHRS12-203ENST00000444610 1162 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
MT-ND3P03897 AC087163.2-201ENST00000457299 853 ntBASIC16.59■□□□□ 0.25
MT-ND3P03897 AC025162.1-201ENST00000554022 565 ntTSL 4 BASIC16.59■□□□□ 0.25
MT-ND3P03897 AP005233.2-201ENST00000561588 372 ntTSL 3 BASIC16.59■□□□□ 0.25
MT-ND3P03897 AC002347.1-201ENST00000569543 541 ntBASIC16.59■□□□□ 0.25
MT-ND3P03897 AC010776.2-201ENST00000588946 1081 ntTSL 2 BASIC16.59■□□□□ 0.25
MT-ND3P03897 AC004706.3-202ENST00000621574 984 ntBASIC16.59■□□□□ 0.25
MT-ND3P03897 HYAL2-208ENST00000447092 4054 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
MT-ND3P03897 LCA10-201ENST00000618311 1392 ntTSL 2 BASIC16.59■□□□□ 0.25
MT-ND3P03897 SLC3A2-208ENST00000536981 1486 ntTSL 2 BASIC16.59■□□□□ 0.25
MT-ND3P03897 PTPRU-201ENST00000345512 4470 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
MT-ND3P03897 SDCBP2-202ENST00000360779 1519 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
MT-ND3P03897 INPP5B-202ENST00000373023 4694 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
MT-ND3P03897 PGAP2-205ENST00000396993 1566 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
MT-ND3P03897 OR4D1-202ENST00000641449 4925 ntAPPRIS P1 BASIC16.59■□□□□ 0.25
MT-ND3P03897 MSMO1-202ENST00000393766 1789 ntTSL 2 BASIC16.59■□□□□ 0.25
MT-ND3P03897 ZNF302-207ENST00000505365 2955 ntTSL 2 BASIC16.59■□□□□ 0.25
MT-ND3P03897 POC1B-202ENST00000393179 3096 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
MT-ND3P03897 RNH1-204ENST00000397614 1864 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
MT-ND3P03897 ZNF197-203ENST00000383744 1989 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
MT-ND3P03897 ITPK1-201ENST00000267615 6066 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
MT-ND3P03897 POLR3D-202ENST00000397802 5494 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
MT-ND3P03897 AC091100.1-201ENST00000558424 2354 ntTSL 2 BASIC16.58■□□□□ 0.25
MT-ND3P03897 DNAJB9-201ENST00000249356 2715 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
MT-ND3P03897 MYLK2-201ENST00000375985 2787 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
MT-ND3P03897 POM121-203ENST00000434423 3750 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.24
MT-ND3P03897 HSPB1-201ENST00000248553 909 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
MT-ND3P03897 PF4-201ENST00000296029 604 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
MT-ND3P03897 VSTM1-201ENST00000338372 1023 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.24
MT-ND3P03897 CD99-204ENST00000381187 892 ntAPPRIS ALT2 TSL 2 BASIC16.58■□□□□ 0.24
MT-ND3P03897 AGTRAP-205ENST00000400895 786 ntTSL 2 BASIC16.58■□□□□ 0.24
MT-ND3P03897 UPF3AP3-201ENST00000420996 769 ntBASIC16.58■□□□□ 0.24
MT-ND3P03897 ARTN-206ENST00000472435 402 ntTSL 3 BASIC16.58■□□□□ 0.24
MT-ND3P03897 AC108751.1-201ENST00000490852 363 ntBASIC16.58■□□□□ 0.24
MT-ND3P03897 AC135050.2-203ENST00000529564 725 ntAPPRIS P1 TSL 4 BASIC16.58■□□□□ 0.24
MT-ND3P03897 TCAP-202ENST00000578283 583 ntTSL 5 BASIC16.58■□□□□ 0.24
MT-ND3P03897 ICAM2-205ENST00000578379 1064 ntTSL 5 BASIC16.58■□□□□ 0.24
MT-ND3P03897 ICAM2-206ENST00000578892 1056 ntTSL 3 BASIC16.58■□□□□ 0.24
MT-ND3P03897 TMEM177-201ENST00000272521 1394 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
MT-ND3P03897 HLA-B-249ENST00000412585 1547 ntAPPRIS P1 BASIC16.58■□□□□ 0.24
MT-ND3P03897 MIF4GD-204ENST00000577542 1531 ntTSL 3 BASIC16.58■□□□□ 0.24
MT-ND3P03897 HPS1-202ENST00000338546 1580 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
MT-ND3P03897 CLEC18A-203ENST00000449317 1875 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.24
MT-ND3P03897 HAPLN3-201ENST00000359595 1980 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
MT-ND3P03897 AC005253.1-201ENST00000597411 2001 ntTSL 4 BASIC16.58■□□□□ 0.24
MT-ND3P03897 NEK11-210ENST00000510769 2149 ntTSL 2 BASIC16.58■□□□□ 0.24
MT-ND3P03897 TMEM40-202ENST00000314124 2308 ntAPPRIS P3 TSL 2 BASIC16.58■□□□□ 0.24
MT-ND3P03897 RNF157-202ENST00000319945 2937 ntAPPRIS ALT2 TSL 2 BASIC16.58■□□□□ 0.24
MT-ND3P03897 SYNCRIP-202ENST00000369622 3023 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.24
MT-ND3P03897 CDK18-201ENST00000360066 3141 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
MT-ND3P03897 SYT5-207ENST00000590851 3619 ntTSL 2 BASIC16.58■□□□□ 0.24
MT-ND3P03897 UBE2J1-201ENST00000435041 4290 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
MT-ND3P03897 DPYSL3-201ENST00000343218 5476 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
MT-ND3P03897 ZFPM2-201ENST00000407775 4700 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
MT-ND3P03897 ATP2C1-224ENST00000533801 3690 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
MT-ND3P03897 SLC39A1-203ENST00000368621 2398 ntAPPRIS P1 TSL 2 BASIC16.57■□□□□ 0.24
MT-ND3P03897 ATP6AP2-217ENST00000636580 2337 ntAPPRIS P2 TSL 1 (best) BASIC16.57■□□□□ 0.24
MT-ND3P03897 CRYZL1-202ENST00000361534 2224 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
MT-ND3P03897 NECAP2-201ENST00000337132 2070 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
MT-ND3P03897 KCTD7-206ENST00000639828 5951 ntAPPRIS P3 TSL 2 BASIC16.57■□□□□ 0.24
MT-ND3P03897 MPL-201ENST00000372470 1908 ntAPPRIS P2 TSL 1 (best) BASIC16.57■□□□□ 0.24
MT-ND3P03897 SERF2-203ENST00000381359 1931 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
MT-ND3P03897 MAGEA2-201ENST00000595583 1830 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
MT-ND3P03897 SQSTM1-213ENST00000510187 1714 ntTSL 5 BASIC16.57■□□□□ 0.24
MT-ND3P03897 AC069224.1-201ENST00000566372 1715 ntBASIC16.57■□□□□ 0.24
MT-ND3P03897 BFSP2-201ENST00000302334 1558 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
MT-ND3P03897 PDXP-202ENST00000403251 1571 ntTSL 2 BASIC16.57■□□□□ 0.24
MT-ND3P03897 SIRT6-201ENST00000305232 1506 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
MT-ND3P03897 SERPINF2-203ENST00000450523 1462 ntTSL 2 BASIC16.57■□□□□ 0.24
MT-ND3P03897 CCAR2-202ENST00000389279 3980 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
MT-ND3P03897 AC097532.1-201ENST00000440802 322 ntTSL 2 BASIC16.57■□□□□ 0.24
MT-ND3P03897 MOBP-208ENST00000441980 830 ntAPPRIS P4 TSL 4 BASIC16.57■□□□□ 0.24
MT-ND3P03897 MRNIP-205ENST00000518235 1244 ntAPPRIS ALT2 TSL 2 BASIC16.57■□□□□ 0.24
MT-ND3P03897 AP000442.1-201ENST00000533552 769 ntTSL 5 BASIC16.57■□□□□ 0.24
MT-ND3P03897 DHRS4-205ENST00000558263 1089 ntTSL 5 BASIC16.57■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 58.1 ms