Protein–RNA interactions for Protein: O95076

ALX3, Homeobox protein aristaless-like 3, humanhuman

Predictions only

Length 343 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALX3O95076 GCK-203ENST00000395796 2539 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
ALX3O95076 C7orf43-207ENST00000457641 2005 ntTSL 5 BASIC14.43□□□□□ -0.1
ALX3O95076 SCRN2-202ENST00000407215 1779 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
ALX3O95076 COLEC11-202ENST00000349077 1259 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
ALX3O95076 NFKBIB-202ENST00000392079 991 ntTSL 5 BASIC14.43□□□□□ -0.1
ALX3O95076 CXCL12-204ENST00000395793 665 ntTSL 5 BASIC14.43□□□□□ -0.1
ALX3O95076 LENG8-AS1-201ENST00000416022 582 ntTSL 3 BASIC14.43□□□□□ -0.1
ALX3O95076 NCBP2-AS1-201ENST00000447775 562 ntTSL 5 BASIC14.43□□□□□ -0.1
ALX3O95076 PHGR1-201ENST00000448599 436 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
ALX3O95076 LINC02237-202ENST00000521904 477 ntTSL 3 BASIC14.43□□□□□ -0.1
ALX3O95076 AC087386.1-201ENST00000553658 572 ntTSL 4 BASIC14.43□□□□□ -0.1
ALX3O95076 DHRS4-205ENST00000558263 1089 ntTSL 5 BASIC14.43□□□□□ -0.1
ALX3O95076 DHRS4L2-207ENST00000558753 556 ntTSL 2 BASIC14.43□□□□□ -0.1
ALX3O95076 PRELID1P1-202ENST00000567272 903 ntBASIC14.43□□□□□ -0.1
ALX3O95076 MCRIP1-211ENST00000576679 751 ntTSL 2 BASIC14.43□□□□□ -0.1
ALX3O95076 SNHG15-203ENST00000578968 982 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
ALX3O95076 IFT20-215ENST00000585313 852 ntAPPRIS P4 TSL 3 BASIC14.43□□□□□ -0.1
ALX3O95076 SIGLEC29P-201ENST00000599873 1114 ntBASIC14.43□□□□□ -0.1
ALX3O95076 TXNDC12-205ENST00000610127 806 ntTSL 2 BASIC14.43□□□□□ -0.1
ALX3O95076 LDHAL6A-203ENST00000615355 1042 ntTSL 5 BASIC14.43□□□□□ -0.1
ALX3O95076 AC139530.3-201ENST00000620344 690 ntBASIC14.43□□□□□ -0.1
ALX3O95076 AC004706.3-202ENST00000621574 984 ntBASIC14.43□□□□□ -0.1
ALX3O95076 AL355877.3-201ENST00000622820 899 ntBASIC14.43□□□□□ -0.1
ALX3O95076 HNRNPUL1-205ENST00000593587 2725 ntTSL 2 BASIC14.43□□□□□ -0.1
ALX3O95076 SNX14-202ENST00000346348 3348 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
ALX3O95076 IMPDH1-202ENST00000348127 2479 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
ALX3O95076 LINC00987-201ENST00000427111 2472 ntTSL 2 BASIC14.43□□□□□ -0.1
ALX3O95076 CRB2-201ENST00000359999 3659 ntTSL 2 BASIC14.43□□□□□ -0.1
ALX3O95076 IMPDH1-203ENST00000354269 2580 ntTSL 2 BASIC14.43□□□□□ -0.1
ALX3O95076 UVSSA-206ENST00000507531 2597 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
ALX3O95076 PCDHGB1-202ENST00000611598 2592 ntAPPRIS ALT2 BASIC14.43□□□□□ -0.1
ALX3O95076 PSEN2-211ENST00000626989 1972 ntTSL 5 BASIC14.43□□□□□ -0.1
ALX3O95076 TVP23B-201ENST00000307767 2064 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
ALX3O95076 IQCE-204ENST00000404984 2086 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
ALX3O95076 ATXN7L1-207ENST00000477775 2426 ntTSL 2 BASIC14.43□□□□□ -0.1
ALX3O95076 ERRFI1-201ENST00000377482 3104 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
ALX3O95076 RAB2A-201ENST00000262646 3848 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
ALX3O95076 ARID5A-201ENST00000357485 2188 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
ALX3O95076 DIDO1-201ENST00000266070 8574 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
ALX3O95076 AIFM1-201ENST00000287295 2260 ntAPPRIS P4 TSL 1 (best) BASIC14.43□□□□□ -0.1
ALX3O95076 SLC25A37-206ENST00000519973 4823 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
ALX3O95076 PCDHA4-203ENST00000530339 5251 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
ALX3O95076 DMTN-204ENST00000415253 2394 ntTSL 5 BASIC14.42□□□□□ -0.1
ALX3O95076 DPP6-205ENST00000427557 2388 ntTSL 2 BASIC14.42□□□□□ -0.1
ALX3O95076 CEP131-203ENST00000450824 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
ALX3O95076 LDB3-208ENST00000623007 1664 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
ALX3O95076 PSMC3IP-202ENST00000393795 1416 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
ALX3O95076 ERVK13-1-203ENST00000564340 1449 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
ALX3O95076 KCNT1-214ENST00000631073 3948 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
ALX3O95076 FEM1C-201ENST00000274457 5816 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
ALX3O95076 POLR2A-201ENST00000572844 2083 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
ALX3O95076 TPD52L2-209ENST00000611972 2197 ntTSL 3 BASIC14.42□□□□□ -0.1
ALX3O95076 CKLF-202ENST00000345436 571 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
ALX3O95076 MRPL52-202ENST00000355151 1118 ntAPPRIS ALT1 TSL 1 (best) BASIC14.42□□□□□ -0.1
ALX3O95076 DUSP12-201ENST00000367943 1270 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
ALX3O95076 MRPL52-203ENST00000397496 1111 ntAPPRIS P3 TSL 2 BASIC14.42□□□□□ -0.1
ALX3O95076 KRTCAP3-202ENST00000407293 942 ntTSL 2 BASIC14.42□□□□□ -0.1
ALX3O95076 ZFAND2B-207ENST00000409412 569 ntTSL 2 BASIC14.42□□□□□ -0.1
ALX3O95076 AL022314.1-201ENST00000414203 464 ntTSL 5 BASIC14.42□□□□□ -0.1
ALX3O95076 DMKN-206ENST00000418261 1257 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
ALX3O95076 FAAHP1-202ENST00000446499 1238 ntBASIC14.42□□□□□ -0.1
ALX3O95076 AHSA1-208ENST00000555517 832 ntTSL 2 BASIC14.42□□□□□ -0.1
ALX3O95076 CTDNEP1-207ENST00000572043 857 ntTSL 3 BASIC14.42□□□□□ -0.1
ALX3O95076 C18orf21-207ENST00000610527 1059 ntTSL 2 BASIC14.42□□□□□ -0.1
ALX3O95076 FAM25C-201ENST00000617224 319 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
ALX3O95076 C18orf21-208ENST00000618334 856 ntTSL 3 BASIC14.42□□□□□ -0.1
ALX3O95076 CACNA1A-238ENST00000637276 7135 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
ALX3O95076 MZF1-201ENST00000215057 2905 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
ALX3O95076 CPXM2-201ENST00000241305 3554 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
ALX3O95076 CABP1-201ENST00000288616 1369 ntAPPRIS P4 TSL 1 (best) BASIC14.42□□□□□ -0.1
ALX3O95076 KLC4-204ENST00000453940 1945 ntTSL 2 BASIC14.42□□□□□ -0.1
ALX3O95076 KRT85-202ENST00000544265 1387 ntTSL 2 BASIC14.42□□□□□ -0.1
ALX3O95076 CIAPIN1-209ENST00000567518 2016 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
ALX3O95076 TIGAR-201ENST00000179259 2782 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
ALX3O95076 THTPA-203ENST00000554789 1595 ntTSL 2 BASIC14.42□□□□□ -0.1
ALX3O95076 TSC22D3-201ENST00000315660 2213 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
ALX3O95076 RBPMS-201ENST00000287771 2974 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
ALX3O95076 SPOCK3-201ENST00000357154 2986 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
ALX3O95076 GTF3C4-201ENST00000372146 9043 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
ALX3O95076 ATP5S-201ENST00000245448 1671 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
ALX3O95076 PDE4DIP-230ENST00000530472 1690 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
ALX3O95076 DUOXA2-201ENST00000323030 1760 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
ALX3O95076 ZMYND12-201ENST00000372565 1775 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
ALX3O95076 SLC2A9-201ENST00000264784 1850 ntAPPRIS P4 TSL 1 (best) BASIC14.42□□□□□ -0.1
ALX3O95076 CMKLR1-204ENST00000550402 1893 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
ALX3O95076 MAP3K4-202ENST00000366919 5397 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
ALX3O95076 BECN1-213ENST00000590099 2087 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
ALX3O95076 PDE1B-207ENST00000550620 2150 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
ALX3O95076 QRICH2-205ENST00000636395 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
ALX3O95076 CGREF1-206ENST00000405600 1346 ntAPPRIS P2 TSL 4 BASIC14.41□□□□□ -0.1
ALX3O95076 NF1-211ENST00000487476 2265 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
ALX3O95076 EID1-201ENST00000530028 2298 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
ALX3O95076 SOX7-201ENST00000304501 3216 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
ALX3O95076 KANK1-204ENST00000382293 5249 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
ALX3O95076 NFIC-211ENST00000641145 8399 ntBASIC14.41□□□□□ -0.1
ALX3O95076 ZNF84-215ENST00000543758 3501 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
ALX3O95076 CAMKK2-209ENST00000446440 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
ALX3O95076 MARS-233ENST00000628866 2583 ntTSL 5 BASIC14.41□□□□□ -0.1
ALX3O95076 PBX3-201ENST00000342287 2755 ntAPPRIS ALT1 TSL 5 BASIC14.41□□□□□ -0.1
ALX3O95076 CHAD-201ENST00000258969 1739 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 29.9 ms