Protein–RNA interactions for Protein: O76039

CDKL5, Cyclin-dependent kinase-like 5, humanhuman

Predictions only

Length 1,030 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5O76039 SH3BP4-203ENST00000409212 5231 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
CDKL5O76039 AC005906.2-217ENST00000639573 1711 ntTSL 5 BASIC18.85■□□□□ 0.61
CDKL5O76039 PDCD2-208ENST00000541970 3378 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CDKL5O76039 CACNA1A-240ENST00000637432 7809 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
CDKL5O76039 BAIAP2-219ENST00000575245 2229 ntTSL 5 BASIC18.85■□□□□ 0.61
CDKL5O76039 AGK-211ENST00000629555 2765 ntTSL 5 BASIC18.85■□□□□ 0.61
CDKL5O76039 CLDND1-222ENST00000510545 2124 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
CDKL5O76039 RWDD4-201ENST00000326397 2641 ntAPPRIS P2 TSL 2 BASIC18.85■□□□□ 0.61
CDKL5O76039 USP27X-201ENST00000621775 2618 ntAPPRIS P1 BASIC18.85■□□□□ 0.61
CDKL5O76039 PLAA-205ENST00000520884 2041 ntTSL 2 BASIC18.84■□□□□ 0.61
CDKL5O76039 PCDHGC5-202ENST00000610789 2763 ntAPPRIS ALT2 BASIC18.84■□□□□ 0.61
CDKL5O76039 ADD1-205ENST00000398125 4079 ntTSL 5 BASIC18.84■□□□□ 0.61
CDKL5O76039 TXNRD2-214ENST00000491939 2238 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
CDKL5O76039 KRT35-201ENST00000246639 1778 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
CDKL5O76039 ANXA6-211ENST00000521512 1793 ntTSL 5 BASIC18.84■□□□□ 0.61
CDKL5O76039 TRAF3-204ENST00000539721 1786 ntTSL 2 BASIC18.84■□□□□ 0.61
CDKL5O76039 HEY1-208ENST00000523976 1325 ntTSL 2 BASIC18.84■□□□□ 0.61
CDKL5O76039 FGF11-201ENST00000293829 3063 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CDKL5O76039 FAM131B-206ENST00000443739 4382 ntAPPRIS ALT1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CDKL5O76039 DZIP1-203ENST00000361396 7418 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
CDKL5O76039 RPL3L-201ENST00000268661 2182 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CDKL5O76039 ATP11A-AS1-201ENST00000446442 2192 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
CDKL5O76039 LRRC47-201ENST00000378251 4310 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CDKL5O76039 BMI1-201ENST00000376663 3428 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CDKL5O76039 C19orf70-201ENST00000309324 896 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CDKL5O76039 COA5-202ENST00000409997 557 ntTSL 4 BASIC18.84■□□□□ 0.61
CDKL5O76039 CR559946.1-201ENST00000453835 531 ntTSL 4 BASIC18.84■□□□□ 0.61
CDKL5O76039 TMEM176A-202ENST00000461345 635 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
CDKL5O76039 SEC24B-AS1-201ENST00000499359 957 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
CDKL5O76039 SEC24B-AS1-204ENST00000510971 554 ntTSL 4 BASIC18.84■□□□□ 0.61
CDKL5O76039 RPL8-207ENST00000528957 1015 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CDKL5O76039 TWSG1-202ENST00000581641 1119 ntTSL 2 BASIC18.84■□□□□ 0.61
CDKL5O76039 RPL27-206ENST00000589913 697 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CDKL5O76039 SSH2-211ENST00000590153 570 ntTSL 4 BASIC18.84■□□□□ 0.61
CDKL5O76039 AC007192.2-201ENST00000600364 463 ntTSL 5 BASIC18.84■□□□□ 0.61
CDKL5O76039 AC010624.2-201ENST00000600998 575 ntTSL 5 BASIC18.84■□□□□ 0.61
CDKL5O76039 CCT7-216ENST00000540468 1674 ntTSL 2 BASIC18.84■□□□□ 0.61
CDKL5O76039 KIAA1586-201ENST00000370733 2933 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CDKL5O76039 KCNQ2-209ENST00000625514 2925 ntTSL 5 BASIC18.84■□□□□ 0.61
CDKL5O76039 CD34-202ENST00000356522 2874 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
CDKL5O76039 MSI2-204ENST00000442934 1624 ntTSL 2 BASIC18.84■□□□□ 0.61
CDKL5O76039 RIC8B-213ENST00000638198 1611 ntTSL 5 BASIC18.84■□□□□ 0.61
CDKL5O76039 LIPE-AS1-201ENST00000457234 1501 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
CDKL5O76039 UXT-AS1-201ENST00000590504 1525 ntBASIC18.84■□□□□ 0.61
CDKL5O76039 FEN1-201ENST00000305885 2296 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CDKL5O76039 SLC30A4-201ENST00000261867 7157 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CDKL5O76039 SDC4-201ENST00000372733 2613 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CDKL5O76039 ARHGEF28-201ENST00000296794 5246 ntTSL 5 BASIC18.84■□□□□ 0.61
CDKL5O76039 TRIM14-201ENST00000341469 4454 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CDKL5O76039 SLC29A1-205ENST00000371740 2219 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CDKL5O76039 GPSM3-206ENST00000375040 1476 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CDKL5O76039 TJP1-201ENST00000346128 7950 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.61
CDKL5O76039 RNLS-201ENST00000331772 1447 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
CDKL5O76039 RIMS3-201ENST00000372683 1408 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
CDKL5O76039 CLEC17A-202ENST00000417570 1399 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
CDKL5O76039 PRMT1-217ENST00000532489 1686 ntTSL 5 BASIC18.83■□□□□ 0.61
CDKL5O76039 EIF1B-AS1-206ENST00000631175 1303 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
CDKL5O76039 ZNF574-202ENST00000359044 2940 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
CDKL5O76039 SHMT2-232ENST00000557487 1918 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
CDKL5O76039 CCNL1-201ENST00000295925 549 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
CDKL5O76039 C11orf88-201ENST00000332814 795 ntAPPRIS P4 TSL 5 BASIC18.83■□□□□ 0.6
CDKL5O76039 MAPK15-202ENST00000395107 834 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
CDKL5O76039 NKIRAS1-204ENST00000416026 795 ntAPPRIS P2 TSL 3 BASIC18.83■□□□□ 0.6
CDKL5O76039 SPINK2-203ENST00000506738 763 ntAPPRIS ALT2 TSL 2 BASIC18.83■□□□□ 0.6
CDKL5O76039 CCND1-203ENST00000536559 553 ntTSL 3 BASIC18.83■□□□□ 0.6
CDKL5O76039 AL390334.1-205ENST00000555797 411 ntTSL 3 BASIC18.83■□□□□ 0.6
CDKL5O76039 AC020978.5-201ENST00000564147 533 ntTSL 4 BASIC18.83■□□□□ 0.6
CDKL5O76039 PAM16-215ENST00000577031 548 ntTSL 4 BASIC18.83■□□□□ 0.6
CDKL5O76039 AC008761.1-201ENST00000595363 217 ntTSL 5 BASIC18.83■□□□□ 0.6
CDKL5O76039 AC055717.3-201ENST00000622967 595 ntBASIC18.83■□□□□ 0.6
CDKL5O76039 AC105339.1-204ENST00000636249 355 ntBASIC18.83■□□□□ 0.6
CDKL5O76039 ZNF628-201ENST00000391718 3177 ntAPPRIS ALT2 BASIC18.83■□□□□ 0.6
CDKL5O76039 NDUFV1-201ENST00000322776 1596 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.6
CDKL5O76039 CERCAM-213ENST00000612334 1554 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.6
CDKL5O76039 AC008741.2-201ENST00000612792 3115 ntBASIC18.83■□□□□ 0.6
CDKL5O76039 CACFD1-201ENST00000291722 2688 ntTSL 2 BASIC18.83■□□□□ 0.6
CDKL5O76039 GTPBP8-202ENST00000383677 1787 ntTSL 3 BASIC18.83■□□□□ 0.6
CDKL5O76039 SLC3A2-208ENST00000536981 1486 ntTSL 2 BASIC18.83■□□□□ 0.6
CDKL5O76039 BMP1-201ENST00000306349 2626 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
CDKL5O76039 DRG1-201ENST00000331457 1746 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
CDKL5O76039 CACNA1A-238ENST00000637276 7135 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.6
CDKL5O76039 MRPL57-201ENST00000309594 2246 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CDKL5O76039 AC011477.6-201ENST00000604980 1927 ntBASIC18.82■□□□□ 0.6
CDKL5O76039 SLA2-202ENST00000360672 2171 ntTSL 5 BASIC18.82■□□□□ 0.6
CDKL5O76039 GLIPR2-205ENST00000619700 1645 ntTSL 3 BASIC18.82■□□□□ 0.6
CDKL5O76039 KRT2-201ENST00000309680 2403 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CDKL5O76039 NSL1-203ENST00000366978 1344 ntTSL 2 BASIC18.82■□□□□ 0.6
CDKL5O76039 FGFR3-204ENST00000412135 3951 ntTSL 5 BASIC18.82■□□□□ 0.6
CDKL5O76039 CORO1A-208ENST00000565497 1348 ntTSL 5 BASIC18.82■□□□□ 0.6
CDKL5O76039 ABHD2-207ENST00000565973 2347 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
CDKL5O76039 SCYL1-214ENST00000533862 2570 ntTSL 5 BASIC18.82■□□□□ 0.6
CDKL5O76039 AFG3L1P-209ENST00000429663 458 ntTSL 3 BASIC18.82■□□□□ 0.6
CDKL5O76039 AC069335.1-201ENST00000489972 472 ntBASIC18.82■□□□□ 0.6
CDKL5O76039 SERF1A-207ENST00000512649 846 ntTSL 2 BASIC18.82■□□□□ 0.6
CDKL5O76039 AC008127.1-201ENST00000548424 499 ntTSL 5 BASIC18.82■□□□□ 0.6
CDKL5O76039 MIR4469-201ENST00000583919 79 ntBASIC18.82■□□□□ 0.6
CDKL5O76039 PRELID3A-208ENST00000590956 777 ntTSL 2 BASIC18.82■□□□□ 0.6
CDKL5O76039 AC022145.2-201ENST00000598203 171 ntBASIC18.82■□□□□ 0.6
CDKL5O76039 CNPY4-201ENST00000262932 1502 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CDKL5O76039 SMIM5-201ENST00000375215 1546 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 54.9 ms