Protein–RNA interactions for Protein: O60925

PFDN1, Prefoldin subunit 1, humanhuman

Predictions only

Length 122 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN1O60925 KRT18P11-201ENST00000435214 1283 ntBASIC14.47□□□□□ -0.09
PFDN1O60925 PEMT-206ENST00000435340 960 ntTSL 5 BASIC14.47□□□□□ -0.09
PFDN1O60925 CNN2P6-201ENST00000439038 900 ntBASIC14.47□□□□□ -0.09
PFDN1O60925 FGFR1OP2-206ENST00000546072 956 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
PFDN1O60925 PTGER2-202ENST00000557436 643 ntTSL 3 BASIC14.47□□□□□ -0.09
PFDN1O60925 SLC9A3R2-208ENST00000566198 1199 ntTSL 2 BASIC14.47□□□□□ -0.09
PFDN1O60925 HERC2P4-206ENST00000568097 1062 ntTSL 5 BASIC14.47□□□□□ -0.09
PFDN1O60925 HERC2P5-204ENST00000569697 1214 ntTSL 2 BASIC14.47□□□□□ -0.09
PFDN1O60925 MAP7-202ENST00000432797 4375 ntAPPRIS ALT2 TSL 2 BASIC14.47□□□□□ -0.09
PFDN1O60925 PYROXD2-201ENST00000370575 2028 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
PFDN1O60925 AMT-221ENST00000538581 2038 ntTSL 2 BASIC14.47□□□□□ -0.09
PFDN1O60925 AC105206.1-202ENST00000314927 2368 ntBASIC14.47□□□□□ -0.09
PFDN1O60925 KRT8P7-201ENST00000533003 1432 ntBASIC14.47□□□□□ -0.09
PFDN1O60925 PPP1R13L-201ENST00000360957 3104 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
PFDN1O60925 RRAGD-201ENST00000359203 4042 ntTSL 2 BASIC14.47□□□□□ -0.09
PFDN1O60925 LSS-211ENST00000522411 2523 ntTSL 2 BASIC14.47□□□□□ -0.09
PFDN1O60925 DUOXA2-201ENST00000323030 1760 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
PFDN1O60925 C14orf93-204ENST00000397377 1776 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
PFDN1O60925 NFE2-202ENST00000435572 1762 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
PFDN1O60925 ZNF786-202ENST00000491431 2874 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
PFDN1O60925 GSEC-202ENST00000629441 1572 ntTSL 2 BASIC14.47□□□□□ -0.09
PFDN1O60925 B4GALT6-201ENST00000237019 2128 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
PFDN1O60925 SLC35D1-201ENST00000235345 6162 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
PFDN1O60925 SSBP2-220ENST00000615665 4465 ntTSL 5 BASIC14.47□□□□□ -0.09
PFDN1O60925 RECQL5-202ENST00000340830 1749 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
PFDN1O60925 MAGEA3-201ENST00000370278 1724 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
PFDN1O60925 GRHPR-212ENST00000607784 1704 ntTSL 5 BASIC14.46□□□□□ -0.09
PFDN1O60925 SF3A1-201ENST00000215793 5143 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
PFDN1O60925 NDUFV1-202ENST00000415352 1512 ntAPPRIS ALT1 TSL 2 BASIC14.46□□□□□ -0.09
PFDN1O60925 FRMD8P1-201ENST00000440433 1524 ntBASIC14.46□□□□□ -0.09
PFDN1O60925 BCAP29-201ENST00000005259 4572 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
PFDN1O60925 SAAL1-204ENST00000529318 1503 ntAPPRIS ALT1 TSL 5 BASIC14.46□□□□□ -0.09
PFDN1O60925 CALML3-201ENST00000315238 2763 ntAPPRIS P1 BASIC14.46□□□□□ -0.09
PFDN1O60925 CRMP1-205ENST00000512574 2764 ntTSL 2 BASIC14.46□□□□□ -0.09
PFDN1O60925 MKL1-202ENST00000396617 4505 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
PFDN1O60925 CES1-203ENST00000422046 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC14.46□□□□□ -0.09
PFDN1O60925 PNPLA5-204ENST00000593866 2197 ntTSL 2 BASIC14.46□□□□□ -0.09
PFDN1O60925 NEAT1-201ENST00000499732 1811 ntTSL 2 BASIC14.46□□□□□ -0.09
PFDN1O60925 PCDHGB7-201ENST00000398594 4765 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.09
PFDN1O60925 CDH3-201ENST00000264012 4929 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
PFDN1O60925 SEC14L3-204ENST00000403066 2474 ntTSL 2 BASIC14.46□□□□□ -0.09
PFDN1O60925 AC019068.1-201ENST00000415226 552 ntTSL 4 BASIC14.46□□□□□ -0.09
PFDN1O60925 TMEM218-206ENST00000527766 812 ntAPPRIS P1 TSL 3 BASIC14.46□□□□□ -0.09
PFDN1O60925 SPI1-203ENST00000533030 661 ntTSL 2 BASIC14.46□□□□□ -0.09
PFDN1O60925 FAM213B-215ENST00000537325 1096 ntAPPRIS ALT2 TSL 2 BASIC14.46□□□□□ -0.09
PFDN1O60925 AL929601.1-201ENST00000551565 573 ntTSL 4 BASIC14.46□□□□□ -0.09
PFDN1O60925 PLEKHJ1-213ENST00000591099 1092 ntTSL 2 BASIC14.46□□□□□ -0.09
PFDN1O60925 ATP6V0E2-211ENST00000606024 893 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
PFDN1O60925 HLCS-201ENST00000336648 6010 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
PFDN1O60925 MYO1C-218ENST00000575158 4804 ntAPPRIS P3 TSL 5 BASIC14.46□□□□□ -0.09
PFDN1O60925 CAMK2B-217ENST00000457475 4142 ntTSL 5 BASIC14.46□□□□□ -0.09
PFDN1O60925 TBC1D1-214ENST00000508802 4119 ntTSL 2 BASIC14.46□□□□□ -0.09
PFDN1O60925 CDCP1-202ENST00000425231 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
PFDN1O60925 DCAF8-211ENST00000475733 1426 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
PFDN1O60925 TRIM11-204ENST00000493030 5774 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
PFDN1O60925 DRD2-201ENST00000346454 2433 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
PFDN1O60925 SULF1-202ENST00000402687 4891 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
PFDN1O60925 GP6-202ENST00000333884 2210 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.1
PFDN1O60925 CACNA1G-230ENST00000514717 6699 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.1
PFDN1O60925 CELF4-201ENST00000334919 3542 ntAPPRIS ALT1 TSL 1 (best) BASIC14.46□□□□□ -0.1
PFDN1O60925 ZEB1-AS1-208ENST00000607166 2503 ntBASIC14.46□□□□□ -0.1
PFDN1O60925 MBD1-205ENST00000353909 2820 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
PFDN1O60925 SH2D3C-201ENST00000314830 3124 ntAPPRIS P4 TSL 1 (best) BASIC14.46□□□□□ -0.1
PFDN1O60925 ITPR3-202ENST00000605930 9029 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
PFDN1O60925 PPOX-201ENST00000352210 1686 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
PFDN1O60925 COL18A1-AS1-201ENST00000397787 3425 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
PFDN1O60925 NISCH-207ENST00000479054 5173 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
PFDN1O60925 DHCR7-202ENST00000407721 2601 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
PFDN1O60925 BUB1B-PAK6-201ENST00000441369 2767 ntAPPRIS P1 TSL 2 BASIC14.45□□□□□ -0.1
PFDN1O60925 HECTD2-201ENST00000298068 4802 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
PFDN1O60925 MAP7-201ENST00000354570 4152 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
PFDN1O60925 USP9X-202ENST00000378308 8371 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
PFDN1O60925 HSD11B1L-221ENST00000583928 1319 ntTSL 5 BASIC14.45□□□□□ -0.1
PFDN1O60925 LRRC29-209ENST00000629962 1303 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
PFDN1O60925 AATK-AS1-203ENST00000637878 1306 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
PFDN1O60925 CAMKMT-201ENST00000378494 1495 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
PFDN1O60925 AL079301.1-201ENST00000424580 1633 ntTSL 2 BASIC14.45□□□□□ -0.1
PFDN1O60925 PRKCSH-212ENST00000591462 2209 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
PFDN1O60925 TVP23C-CDRT4-203ENST00000522212 2833 ntAPPRIS P1 TSL 2 BASIC14.45□□□□□ -0.1
PFDN1O60925 SGSM1-206ENST00000610372 5991 ntTSL 5 BASIC14.45□□□□□ -0.1
PFDN1O60925 TXNDC2-201ENST00000306084 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
PFDN1O60925 S100A14-203ENST00000368701 1080 ntAPPRIS P1 TSL 2 BASIC14.45□□□□□ -0.1
PFDN1O60925 ACADM-202ENST00000370841 2619 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
PFDN1O60925 HYI-206ENST00000372434 1025 ntTSL 5 BASIC14.45□□□□□ -0.1
PFDN1O60925 SNCA-203ENST00000394986 1420 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
PFDN1O60925 HM13-AS1-201ENST00000412178 489 ntTSL 3 BASIC14.45□□□□□ -0.1
PFDN1O60925 OS9-206ENST00000435406 2346 ntTSL 2 BASIC14.45□□□□□ -0.1
PFDN1O60925 LINC00865-202ENST00000448963 4272 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
PFDN1O60925 AC022028.2-201ENST00000474115 2619 ntTSL 2 BASIC14.45□□□□□ -0.1
PFDN1O60925 RAB7A-203ENST00000482525 1589 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
PFDN1O60925 CCS-208ENST00000533244 1430 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
PFDN1O60925 RCBTB2-205ENST00000544492 2622 ntTSL 2 BASIC14.45□□□□□ -0.1
PFDN1O60925 SLC38A1-204ENST00000546893 2332 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
PFDN1O60925 AC007493.2-201ENST00000568427 478 ntTSL 3 BASIC14.45□□□□□ -0.1
PFDN1O60925 AC105020.4-201ENST00000569467 563 ntTSL 4 BASIC14.45□□□□□ -0.1
PFDN1O60925 CCER2-201ENST00000571838 1057 ntAPPRIS P2 TSL 5 BASIC14.45□□□□□ -0.1
PFDN1O60925 SLC7A9-202ENST00000587772 1568 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
PFDN1O60925 PET100-202ENST00000594797 719 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
PFDN1O60925 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC14.45□□□□□ -0.1
PFDN1O60925 AC131212.1-201ENST00000613771 668 ntBASIC14.45□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 53 ms