Protein–RNA interactions for Protein: O43541

SMAD6, Mothers against decapentaplegic homolog 6, humanhuman

Known RBP Predictions only

Length 496 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD6O43541 CIB3-201ENST00000269878 711 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
SMAD6O43541 CRYGN-201ENST00000337323 754 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
SMAD6O43541 NNAT-202ENST00000346199 1209 ntAPPRIS ALT1 TSL 1 (best) BASIC16.31■□□□□ 0.2
SMAD6O43541 SFT2D1-201ENST00000361731 1079 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
SMAD6O43541 EFHD1-202ENST00000409613 1156 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
SMAD6O43541 LINC01273-201ENST00000411453 685 ntTSL 2 BASIC16.31■□□□□ 0.2
SMAD6O43541 LINC00659-201ENST00000412500 540 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
SMAD6O43541 ZDHHC20-IT1-201ENST00000417513 440 ntTSL 3 BASIC16.31■□□□□ 0.2
SMAD6O43541 RCAN3-204ENST00000425530 997 ntTSL 5 BASIC16.31■□□□□ 0.2
SMAD6O43541 SHBG-204ENST00000441599 973 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
SMAD6O43541 TMPRSS11CP-201ENST00000453277 683 ntBASIC16.31■□□□□ 0.2
SMAD6O43541 UBE2H-204ENST00000473814 535 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
SMAD6O43541 RN7SL618P-201ENST00000477850 296 ntBASIC16.31■□□□□ 0.2
SMAD6O43541 SERBP1P5-201ENST00000510079 1181 ntBASIC16.31■□□□□ 0.2
SMAD6O43541 TGIF2-C20orf24-201ENST00000558530 918 ntAPPRIS P1 TSL 3 BASIC16.31■□□□□ 0.2
SMAD6O43541 AC044860.1-202ENST00000559481 777 ntBASIC16.31■□□□□ 0.2
SMAD6O43541 GREM1-201ENST00000560677 623 ntTSL 4 BASIC16.31■□□□□ 0.2
SMAD6O43541 AC040162.1-202ENST00000573493 573 ntAPPRIS P1 TSL 3 BASIC16.31■□□□□ 0.2
SMAD6O43541 AC087645.2-202ENST00000586583 643 ntTSL 4 BASIC16.31■□□□□ 0.2
SMAD6O43541 LINC02560-201ENST00000596379 459 ntBASIC16.31■□□□□ 0.2
SMAD6O43541 AL136531.2-202ENST00000617804 573 ntAPPRIS P1 TSL 4 BASIC16.31■□□□□ 0.2
SMAD6O43541 HFE2-206ENST00000634927 506 ntTSL 4 BASIC16.31■□□□□ 0.2
SMAD6O43541 AC004840.1-201ENST00000636359 365 ntBASIC16.31■□□□□ 0.2
SMAD6O43541 CDC14A-202ENST00000361544 2417 ntAPPRIS P4 TSL 1 (best) BASIC16.31■□□□□ 0.2
SMAD6O43541 TMEM132E-201ENST00000321639 5631 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
SMAD6O43541 ASAP3-212ENST00000618240 2226 ntTSL 5 BASIC16.31■□□□□ 0.2
SMAD6O43541 VCAN-204ENST00000502527 2087 ntAPPRIS ALT1 TSL 1 (best) BASIC16.31■□□□□ 0.2
SMAD6O43541 SYNGAP1-202ENST00000418600 5828 ntTSL 5 BASIC16.31■□□□□ 0.2
SMAD6O43541 PBX1-215ENST00000559240 2866 ntTSL 5 BASIC16.31■□□□□ 0.2
SMAD6O43541 SYVN1-202ENST00000307289 2841 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
SMAD6O43541 SLC45A1-202ENST00000471889 2784 ntTSL 5 BASIC16.31■□□□□ 0.2
SMAD6O43541 UEVLD-203ENST00000379387 1848 ntTSL 2 BASIC16.31■□□□□ 0.2
SMAD6O43541 PCBP1-201ENST00000303577 1750 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
SMAD6O43541 U73166.1-201ENST00000439898 2625 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
SMAD6O43541 TBL2-201ENST00000305632 3161 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
SMAD6O43541 CLDN19-202ENST00000372539 1586 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
SMAD6O43541 CTSO-201ENST00000433477 2954 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
SMAD6O43541 RDM1-227ENST00000619876 1491 ntAPPRIS ALT2 TSL 2 BASIC16.3■□□□□ 0.2
SMAD6O43541 SOX14-201ENST00000306087 2055 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
SMAD6O43541 ETV2-205ENST00000479824 1342 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
SMAD6O43541 ASB12-201ENST00000362002 1289 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
SMAD6O43541 HDAC8-203ENST00000373559 632 ntTSL 2 BASIC16.3■□□□□ 0.2
SMAD6O43541 HDAC8-208ENST00000373583 434 ntTSL 5 BASIC16.3■□□□□ 0.2
SMAD6O43541 AC004987.2-201ENST00000395959 1148 ntBASIC16.3■□□□□ 0.2
SMAD6O43541 AC019103.1-201ENST00000503095 272 ntTSL 3 BASIC16.3■□□□□ 0.2
SMAD6O43541 AC106795.3-201ENST00000511650 547 ntTSL 4 BASIC16.3■□□□□ 0.2
SMAD6O43541 STOM-203ENST00000538954 1257 ntTSL 5 BASIC16.3■□□□□ 0.2
SMAD6O43541 AC243562.2-201ENST00000561247 970 ntBASIC16.3■□□□□ 0.2
SMAD6O43541 PSMD7-204ENST00000567958 692 ntTSL 3 BASIC16.3■□□□□ 0.2
SMAD6O43541 SSH2-210ENST00000582084 560 ntTSL 3 BASIC16.3■□□□□ 0.2
SMAD6O43541 LINC00207-204ENST00000605505 666 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
SMAD6O43541 SLC8B1-210ENST00000550047 2493 ntTSL 2 BASIC16.3■□□□□ 0.2
SMAD6O43541 LZTS3-202ENST00000337576 4238 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
SMAD6O43541 CBS-202ENST00000359624 2353 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
SMAD6O43541 CBSL-203ENST00000618024 2353 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
SMAD6O43541 GFAP-233ENST00000639277 1783 ntTSL 5 BASIC16.3■□□□□ 0.2
SMAD6O43541 C2orf68-202ENST00000409734 1722 ntTSL 2 BASIC16.3■□□□□ 0.2
SMAD6O43541 DAND5-202ENST00000585548 1731 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
SMAD6O43541 AC026412.1-202ENST00000512335 2231 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
SMAD6O43541 GSAP-201ENST00000257626 3251 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
SMAD6O43541 CALU-205ENST00000535011 3210 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
SMAD6O43541 ZNF84-208ENST00000539354 3237 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
SMAD6O43541 MPP2-208ENST00000520305 2111 ntTSL 2 BASIC16.3■□□□□ 0.2
SMAD6O43541 PARVB-203ENST00000404989 1591 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
SMAD6O43541 AC005329.1-201ENST00000501448 3571 ntTSL 2 BASIC16.3■□□□□ 0.2
SMAD6O43541 AC005622.1-202ENST00000637093 1543 ntTSL 5 BASIC16.29■□□□□ 0.2
SMAD6O43541 AC006974.1-201ENST00000637928 1501 ntTSL 5 BASIC16.29■□□□□ 0.2
SMAD6O43541 PDK1-203ENST00000410055 2990 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
SMAD6O43541 TAGLN3-202ENST00000393917 1488 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
SMAD6O43541 LRRC20-206ENST00000395011 2903 ntTSL 4 BASIC16.29■□□□□ 0.2
SMAD6O43541 TMEM220-202ENST00000455996 1402 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
SMAD6O43541 KSR1-201ENST00000268763 2806 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
SMAD6O43541 BTN3A1-204ENST00000425234 1882 ntTSL 2 BASIC16.29■□□□□ 0.2
SMAD6O43541 ARHGAP27-208ENST00000528384 2296 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
SMAD6O43541 TMC7-201ENST00000304381 3640 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
SMAD6O43541 COL4A2-201ENST00000360467 6281 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
SMAD6O43541 C14orf93-202ENST00000341470 2221 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
SMAD6O43541 BAIAP2-219ENST00000575245 2229 ntTSL 5 BASIC16.29■□□□□ 0.2
SMAD6O43541 ATP6V0E2-212ENST00000611515 2565 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
SMAD6O43541 ADRB3-201ENST00000345060 2950 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
SMAD6O43541 AGER-204ENST00000375067 1250 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
SMAD6O43541 HAUS4P1-201ENST00000406739 1145 ntBASIC16.29■□□□□ 0.2
SMAD6O43541 GABARAPL1-202ENST00000421801 855 ntTSL 2 BASIC16.29■□□□□ 0.2
SMAD6O43541 GSKIP-201ENST00000438650 2140 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
SMAD6O43541 FXYD1-202ENST00000455515 594 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
SMAD6O43541 LHX6-205ENST00000464484 666 ntTSL 2 BASIC16.29■□□□□ 0.2
SMAD6O43541 OARD1-208ENST00000469104 704 ntTSL 2 BASIC16.29■□□□□ 0.2
SMAD6O43541 CPLX2-206ENST00000512824 518 ntTSL 4 BASIC16.29■□□□□ 0.2
SMAD6O43541 CXCL6-203ENST00000515050 557 ntAPPRIS ALT1 TSL 1 (best) BASIC16.29■□□□□ 0.2
SMAD6O43541 PTHLH-206ENST00000538310 854 ntTSL 5 BASIC16.29■□□□□ 0.2
SMAD6O43541 AL391261.2-201ENST00000554907 773 ntTSL 2 BASIC16.29■□□□□ 0.2
SMAD6O43541 AC138761.1-201ENST00000584393 385 ntBASIC16.29■□□□□ 0.2
SMAD6O43541 OARD1-216ENST00000628419 1188 ntTSL 5 BASIC16.29■□□□□ 0.2
SMAD6O43541 UNG-201ENST00000242576 2071 ntAPPRIS P4 TSL 1 (best) BASIC16.29■□□□□ 0.2
SMAD6O43541 MTHFR-217ENST00000641820 1569 ntBASIC16.29■□□□□ 0.2
SMAD6O43541 RPN1-201ENST00000296255 2314 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
SMAD6O43541 LLGL2-201ENST00000167462 3480 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
SMAD6O43541 KRT73-201ENST00000305748 2284 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
SMAD6O43541 FUT8-213ENST00000557164 2269 ntTSL 2 BASIC16.29■□□□□ 0.2
SMAD6O43541 TUBA1C-201ENST00000301072 3001 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 30.2 ms