Protein–RNA interactions for Protein: O15239

NDUFA1, NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 1, humanhuman

Predictions only

Length 70 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFA1O15239 C6orf48-203ENST00000375638 847 ntAPPRIS P1 TSL 2 BASIC11.15□□□□□ -0.62
NDUFA1O15239 C6orf48-207ENST00000375642 962 ntAPPRIS P1 TSL 2 BASIC11.15□□□□□ -0.62
NDUFA1O15239 PDLIM7-205ENST00000393551 1226 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
NDUFA1O15239 YDJC-202ENST00000398873 1066 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
NDUFA1O15239 AL031587.1-201ENST00000410099 1055 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
NDUFA1O15239 LENG8-AS1-201ENST00000416022 582 ntTSL 3 BASIC11.15□□□□□ -0.62
NDUFA1O15239 CATIP-AS1-202ENST00000441749 480 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
NDUFA1O15239 FAM210CP-201ENST00000445714 574 ntBASIC11.15□□□□□ -0.62
NDUFA1O15239 SSSCA1-206ENST00000531405 879 ntTSL 2 BASIC11.15□□□□□ -0.62
NDUFA1O15239 ERCC5-207ENST00000535557 1125 ntTSL 5 BASIC11.15□□□□□ -0.62
NDUFA1O15239 PNN-202ENST00000553331 656 ntTSL 3 BASIC11.15□□□□□ -0.62
NDUFA1O15239 ATP6V0C-203ENST00000565223 668 ntTSL 3 BASIC11.15□□□□□ -0.62
NDUFA1O15239 ATP6V0C-204ENST00000568562 477 ntTSL 3 BASIC11.15□□□□□ -0.62
NDUFA1O15239 MCRIP1-206ENST00000573478 1123 ntTSL 2 BASIC11.15□□□□□ -0.62
NDUFA1O15239 AC002091.2-201ENST00000585297 402 ntTSL 2 BASIC11.15□□□□□ -0.62
NDUFA1O15239 AC138894.3-201ENST00000603787 634 ntBASIC11.15□□□□□ -0.62
NDUFA1O15239 SYBU-208ENST00000440310 3072 ntAPPRIS ALT2 TSL 5 BASIC11.15□□□□□ -0.62
NDUFA1O15239 TFAP2C-201ENST00000201031 2866 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
NDUFA1O15239 AKAP12-204ENST00000402676 8432 ntAPPRIS P4 TSL 5 BASIC11.15□□□□□ -0.62
NDUFA1O15239 DMPK-202ENST00000343373 3227 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
NDUFA1O15239 HSPA4L-204ENST00000508776 3020 ntAPPRIS P1 TSL 2 BASIC11.15□□□□□ -0.62
NDUFA1O15239 RER1-209ENST00000605895 3044 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
NDUFA1O15239 BCAR3-201ENST00000260502 3171 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
NDUFA1O15239 FAM149B1-201ENST00000242505 5408 ntAPPRIS P1 TSL 5 BASIC11.15□□□□□ -0.62
NDUFA1O15239 CSNK1D-204ENST00000398519 1580 ntTSL 5 BASIC11.15□□□□□ -0.62
NDUFA1O15239 PTPN5-201ENST00000358540 3135 ntTSL 1 (best) BASIC11.15□□□□□ -0.63
NDUFA1O15239 GRAMD2B-217ENST00000515200 3109 ntTSL 5 BASIC11.15□□□□□ -0.63
NDUFA1O15239 FURIN-207ENST00000618099 4345 ntAPPRIS P1 TSL 5 BASIC11.15□□□□□ -0.63
NDUFA1O15239 CDK2-204ENST00000553376 1725 ntTSL 5 BASIC11.15□□□□□ -0.63
NDUFA1O15239 ANKMY2-201ENST00000306999 2555 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.63
NDUFA1O15239 AIFM2-202ENST00000373248 2570 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.63
NDUFA1O15239 AJ239322.1-201ENST00000419362 2209 ntTSL 2 BASIC11.15□□□□□ -0.63
NDUFA1O15239 AL669918.1-201ENST00000452392 2705 ntAPPRIS P1 TSL 2 BASIC11.15□□□□□ -0.63
NDUFA1O15239 CYTH2-214ENST00000641098 2721 ntAPPRIS ALT1 BASIC11.15□□□□□ -0.63
NDUFA1O15239 ACTN2-206ENST00000542672 4906 ntAPPRIS ALT1 TSL 1 (best) BASIC11.14□□□□□ -0.63
NDUFA1O15239 ANK1-202ENST00000289734 8297 ntAPPRIS ALT2 TSL 1 (best) BASIC11.14□□□□□ -0.63
NDUFA1O15239 EDN3-201ENST00000311585 2655 ntAPPRIS ALT2 TSL 1 (best) BASIC11.14□□□□□ -0.63
NDUFA1O15239 THEMIS2-202ENST00000373921 2687 ntAPPRIS P1 TSL 5 BASIC11.14□□□□□ -0.63
NDUFA1O15239 RHOXF1P3-203ENST00000640298 2668 ntTSL 5 BASIC11.14□□□□□ -0.63
NDUFA1O15239 PKD2L2-205ENST00000508638 2333 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
NDUFA1O15239 AC136621.1-201ENST00000624017 2304 ntBASIC11.14□□□□□ -0.63
NDUFA1O15239 GPRASP1-205ENST00000537097 5980 ntAPPRIS P1 TSL 2 BASIC11.14□□□□□ -0.63
NDUFA1O15239 PDCL3-201ENST00000264254 1337 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
NDUFA1O15239 DHRS1-201ENST00000288111 1480 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
NDUFA1O15239 PLCG1-AS1-201ENST00000454626 1462 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
NDUFA1O15239 PRRT2-205ENST00000567659 1470 ntTSL 2 BASIC11.14□□□□□ -0.63
NDUFA1O15239 EPS8L2-223ENST00000533256 3266 ntAPPRIS P2 TSL 5 BASIC11.14□□□□□ -0.63
NDUFA1O15239 PRKCZ-202ENST00000400921 2294 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
NDUFA1O15239 AL512625.3-203ENST00000445604 1602 ntTSL 5 BASIC11.14□□□□□ -0.63
NDUFA1O15239 AC092919.2-201ENST00000623631 1645 ntBASIC11.14□□□□□ -0.63
NDUFA1O15239 UBE3A-204ENST00000438097 8939 ntAPPRIS P3 TSL 5 BASIC11.14□□□□□ -0.63
NDUFA1O15239 SLC25A45-214ENST00000534028 2432 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
NDUFA1O15239 EPHX1-206ENST00000614058 1789 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
NDUFA1O15239 TVP23C-203ENST00000428082 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC11.14□□□□□ -0.63
NDUFA1O15239 NRBP1-201ENST00000233557 2887 ntAPPRIS P1 TSL 2 BASIC11.14□□□□□ -0.63
NDUFA1O15239 TIRAP-203ENST00000392680 2068 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
NDUFA1O15239 FTMT-201ENST00000321339 879 ntAPPRIS P1 BASIC11.14□□□□□ -0.63
NDUFA1O15239 IGLL1-202ENST00000330377 901 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
NDUFA1O15239 ID2-202ENST00000331129 623 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
NDUFA1O15239 PBXIP1-201ENST00000368460 1175 ntAPPRIS ALT2 TSL 3 BASIC11.14□□□□□ -0.63
NDUFA1O15239 CDKN1C-201ENST00000380725 1220 ntAPPRIS ALT2 TSL 2 BASIC11.14□□□□□ -0.63
NDUFA1O15239 ISCU-202ENST00000392807 1069 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
NDUFA1O15239 FOXD3-AS1-201ENST00000418244 941 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
NDUFA1O15239 AL645608.6-201ENST00000418300 402 ntTSL 3 BASIC11.14□□□□□ -0.63
NDUFA1O15239 BX890604.1-205ENST00000425492 856 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
NDUFA1O15239 ISCU-203ENST00000431221 799 ntTSL 2 BASIC11.14□□□□□ -0.63
NDUFA1O15239 LAMTOR4-205ENST00000468582 621 ntTSL 2 BASIC11.14□□□□□ -0.63
NDUFA1O15239 BET1L-206ENST00000486280 665 ntTSL 3 BASIC11.14□□□□□ -0.63
NDUFA1O15239 NDUFA6-202ENST00000498737 1256 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
NDUFA1O15239 AMACR-208ENST00000512079 858 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
NDUFA1O15239 ABO-202ENST00000538324 1147 ntAPPRIS P5 TSL 5 BASIC11.14□□□□□ -0.63
NDUFA1O15239 MPI-205ENST00000562606 1052 ntTSL 3 BASIC11.14□□□□□ -0.63
NDUFA1O15239 AC087289.1-201ENST00000586808 890 ntTSL 5 BASIC11.14□□□□□ -0.63
NDUFA1O15239 NDUFA6-203ENST00000602404 1080 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
NDUFA1O15239 AC008567.3-202ENST00000619671 859 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
NDUFA1O15239 AL139288.1-201ENST00000623748 933 ntBASIC11.14□□□□□ -0.63
NDUFA1O15239 ANKMY2-206ENST00000628652 1270 ntTSL 5 BASIC11.14□□□□□ -0.63
NDUFA1O15239 AL513523.2-201ENST00000633218 660 ntTSL 3 BASIC11.14□□□□□ -0.63
NDUFA1O15239 FBXL22-204ENST00000638704 729 ntAPPRIS ALT2 TSL 2 BASIC11.14□□□□□ -0.63
NDUFA1O15239 AL022326.1-202ENST00000641533 845 ntBASIC11.14□□□□□ -0.63
NDUFA1O15239 LINC00937-207ENST00000544461 3033 ntTSL 2 BASIC11.14□□□□□ -0.63
NDUFA1O15239 DCP1B-202ENST00000535873 2231 ntTSL 2 BASIC11.14□□□□□ -0.63
NDUFA1O15239 DPP6-205ENST00000427557 2388 ntTSL 2 BASIC11.14□□□□□ -0.63
NDUFA1O15239 AP001189.5-201ENST00000637683 1413 ntTSL 5 BASIC11.14□□□□□ -0.63
NDUFA1O15239 SERPINB6-207ENST00000612421 1570 ntTSL 2 BASIC11.14□□□□□ -0.63
NDUFA1O15239 BCAR1-202ENST00000393420 2667 ntTSL 5 BASIC11.14□□□□□ -0.63
NDUFA1O15239 LINC00887-203ENST00000429578 1717 ntTSL 2 BASIC11.14□□□□□ -0.63
NDUFA1O15239 ERRFI1-201ENST00000377482 3104 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
NDUFA1O15239 SRPX-201ENST00000378533 1874 ntAPPRIS P3 TSL 1 (best) BASIC11.14□□□□□ -0.63
NDUFA1O15239 MAP1S-201ENST00000324096 3419 ntAPPRIS P3 TSL 1 (best) BASIC11.14□□□□□ -0.63
NDUFA1O15239 MPP3-201ENST00000398389 2182 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
NDUFA1O15239 GPM6A-210ENST00000506894 2614 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
NDUFA1O15239 PPIL2-212ENST00000626352 2625 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
NDUFA1O15239 USP19-203ENST00000398892 4622 ntAPPRIS ALT2 TSL 5 BASIC11.14□□□□□ -0.63
NDUFA1O15239 AC138035.3-201ENST00000622706 2791 ntBASIC11.14□□□□□ -0.63
NDUFA1O15239 DUS3L-202ENST00000320699 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC11.14□□□□□ -0.63
NDUFA1O15239 MEAF6-201ENST00000296214 1525 ntAPPRIS ALT1 TSL 1 (best) BASIC11.14□□□□□ -0.63
NDUFA1O15239 PNCK-202ENST00000370142 1525 ntTSL 5 BASIC11.14□□□□□ -0.63
NDUFA1O15239 GOLGA2P2Y-202ENST00000423852 1506 ntBASIC11.14□□□□□ -0.63
NDUFA1O15239 CLEC18C-210ENST00000569347 1970 ntAPPRIS P2 TSL 1 (best) BASIC11.14□□□□□ -0.63
Retrieved 100 of 98,524 protein–RNA pairs in 57.5 ms