Protein–RNA interactions for Protein: O14727

APAF1, Apoptotic protease-activating factor 1, humanhuman

Predictions only

Length 1,248 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APAF1O14727 ELF3-201ENST00000359651 4994 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
APAF1O14727 SLC29A1-205ENST00000371740 2219 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
APAF1O14727 PDE3B-201ENST00000282096 6076 ntAPPRIS P2 TSL 1 (best) BASIC21.27■■□□□ 1
APAF1O14727 RIC8B-213ENST00000638198 1611 ntTSL 5 BASIC21.27■■□□□ 1
APAF1O14727 FUK-207ENST00000571514 3054 ntTSL 2 BASIC21.27■■□□□ 1
APAF1O14727 PDCD2L-201ENST00000246535 1171 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
APAF1O14727 ALKBH6-201ENST00000252984 955 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■■□□□ 1
APAF1O14727 HFE-208ENST00000397022 1280 ntTSL 1 (best) BASIC21.27■■□□□ 1
APAF1O14727 TAS2R41-201ENST00000408916 924 ntAPPRIS P1 BASIC21.27■■□□□ 1
APAF1O14727 AL353597.1-201ENST00000414875 998 ntTSL 5 BASIC21.27■■□□□ 1
APAF1O14727 AL353705.2-201ENST00000428243 662 ntBASIC21.27■■□□□ 1
APAF1O14727 PTPRF-209ENST00000438120 6377 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
APAF1O14727 OST4-203ENST00000456793 561 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
APAF1O14727 AC002116.1-201ENST00000473572 1130 ntTSL 2 BASIC21.27■■□□□ 1
APAF1O14727 HFE-214ENST00000488199 781 ntTSL 1 (best) BASIC21.27■■□□□ 1
APAF1O14727 SLCO2B1-205ENST00000525650 2121 ntTSL 2 BASIC21.27■■□□□ 1
APAF1O14727 AC018558.2-201ENST00000566562 480 ntTSL 3 BASIC21.27■■□□□ 1
APAF1O14727 AC022167.4-201ENST00000570290 498 ntTSL 3 BASIC21.27■■□□□ 1
APAF1O14727 TRIML1-201ENST00000332517 1797 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
APAF1O14727 MAN1C1-203ENST00000374332 4641 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
APAF1O14727 MAN1C1-208ENST00000611903 4647 ntTSL 5 BASIC21.27■■□□□ 1
APAF1O14727 TIA1-206ENST00000445587 1440 ntTSL 5 BASIC21.27■■□□□ 1
APAF1O14727 CIAPIN1-207ENST00000565961 1814 ntTSL 3 BASIC21.27■□□□□ 0.99
APAF1O14727 PLCG1-202ENST00000373271 7395 ntAPPRIS ALT1 TSL 1 (best) BASIC21.27■□□□□ 0.99
APAF1O14727 PRSS50-201ENST00000460241 2960 ntAPPRIS P1 TSL 2 BASIC21.27■□□□□ 0.99
APAF1O14727 CD83-201ENST00000379153 2471 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
APAF1O14727 LINC01502-201ENST00000445997 2471 ntTSL 2 BASIC21.27■□□□□ 0.99
APAF1O14727 ACE-203ENST00000413513 2237 ntTSL 2 BASIC21.27■□□□□ 0.99
APAF1O14727 LONRF3-203ENST00000422289 2898 ntTSL 2 BASIC21.26■□□□□ 0.99
APAF1O14727 SNX9-201ENST00000392185 4198 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
APAF1O14727 BAP1-202ENST00000460680 3937 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
APAF1O14727 BMP2K-201ENST00000335016 3804 ntAPPRIS ALT2 TSL 5 BASIC21.26■□□□□ 0.99
APAF1O14727 PEX5-206ENST00000434354 2253 ntTSL 2 BASIC21.26■□□□□ 0.99
APAF1O14727 MAP4K1-208ENST00000589130 2654 ntTSL 5 BASIC21.26■□□□□ 0.99
APAF1O14727 HTR1B-201ENST00000369947 2021 ntAPPRIS P1 BASIC21.26■□□□□ 0.99
APAF1O14727 LINC01529-205ENST00000637365 2000 ntTSL 5 BASIC21.26■□□□□ 0.99
APAF1O14727 SCLT1-204ENST00000503215 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
APAF1O14727 KLC1-207ENST00000445352 2416 ntTSL 5 BASIC21.26■□□□□ 0.99
APAF1O14727 SURF4-209ENST00000618229 3200 ntTSL 2 BASIC21.26■□□□□ 0.99
APAF1O14727 DDX5-201ENST00000225792 2554 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
APAF1O14727 SYNPO-201ENST00000307662 5374 ntAPPRIS P3 TSL 1 (best) BASIC21.26■□□□□ 0.99
APAF1O14727 INPP5B-201ENST00000373021 3934 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
APAF1O14727 ALPPL2-201ENST00000295453 2493 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
APAF1O14727 DKKL1-201ENST00000221498 1222 ntAPPRIS P2 TSL 1 (best) BASIC21.26■□□□□ 0.99
APAF1O14727 PQLC3-202ENST00000402361 696 ntTSL 2 BASIC21.26■□□□□ 0.99
APAF1O14727 SPDYE7P-202ENST00000420373 878 ntBASIC21.26■□□□□ 0.99
APAF1O14727 RPS27L-204ENST00000455271 923 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
APAF1O14727 SSNA1-204ENST00000464553 723 ntTSL 2 BASIC21.26■□□□□ 0.99
APAF1O14727 HEXIM2-206ENST00000591576 1176 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
APAF1O14727 RN7SL828P-201ENST00000607615 303 ntBASIC21.26■□□□□ 0.99
APAF1O14727 NNAT-201ENST00000062104 1297 ntAPPRIS P4 TSL 1 (best) BASIC21.26■□□□□ 0.99
APAF1O14727 NSFL1C-201ENST00000216879 3568 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
APAF1O14727 TNIP1-202ENST00000389378 2935 ntAPPRIS ALT2 TSL 2 BASIC21.26■□□□□ 0.99
APAF1O14727 CAMK2B-208ENST00000395747 1557 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
APAF1O14727 CARS-203ENST00000397111 2685 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
APAF1O14727 REPS2-201ENST00000303843 7771 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
APAF1O14727 TACR2-203ENST00000619173 1713 ntTSL 5 BASIC21.26■□□□□ 0.99
APAF1O14727 MGRN1-201ENST00000262370 3968 ntAPPRIS P3 TSL 1 (best) BASIC21.26■□□□□ 0.99
APAF1O14727 BRF1-206ENST00000446501 2858 ntTSL 2 BASIC21.26■□□□□ 0.99
APAF1O14727 AL163636.2-201ENST00000553909 1498 ntAPPRIS P1 TSL 2 BASIC21.26■□□□□ 0.99
APAF1O14727 KRT35-201ENST00000246639 1778 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
APAF1O14727 CCNA2-201ENST00000274026 2797 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
APAF1O14727 TMEM229B-201ENST00000357461 4068 ntAPPRIS P1 TSL 2 BASIC21.25■□□□□ 0.99
APAF1O14727 SMIM5-201ENST00000375215 1546 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
APAF1O14727 LCK-202ENST00000336890 2117 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
APAF1O14727 OR52W1-201ENST00000311352 1114 ntAPPRIS P1 BASIC21.25■□□□□ 0.99
APAF1O14727 GLUD2-201ENST00000328078 2493 ntAPPRIS P1 BASIC21.25■□□□□ 0.99
APAF1O14727 LINC00313-201ENST00000332440 579 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
APAF1O14727 H3F3C-201ENST00000340398 1057 ntAPPRIS P1 BASIC21.25■□□□□ 0.99
APAF1O14727 ZUFSP-201ENST00000368573 1225 ntTSL 5 BASIC21.25■□□□□ 0.99
APAF1O14727 UGGT2-202ENST00000376714 1233 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
APAF1O14727 MRNIP-202ENST00000376931 1004 ntAPPRIS ALT2 TSL 2 BASIC21.25■□□□□ 0.99
APAF1O14727 PRKACG-201ENST00000377276 1585 ntAPPRIS P1 BASIC21.25■□□□□ 0.99
APAF1O14727 NDUFA3-204ENST00000391764 267 ntTSL 3 BASIC21.25■□□□□ 0.99
APAF1O14727 RBM39-205ENST00000397370 612 ntTSL 2 BASIC21.25■□□□□ 0.99
APAF1O14727 FGFR3-204ENST00000412135 3951 ntTSL 5 BASIC21.25■□□□□ 0.99
APAF1O14727 AL139010.1-201ENST00000454878 894 ntBASIC21.25■□□□□ 0.99
APAF1O14727 TATDN3-212ENST00000530441 492 ntTSL 3 BASIC21.25■□□□□ 0.99
APAF1O14727 LITAF-210ENST00000571976 548 ntTSL 2 BASIC21.25■□□□□ 0.99
APAF1O14727 LITAF-214ENST00000574703 486 ntTSL 2 BASIC21.25■□□□□ 0.99
APAF1O14727 UGGT2-212ENST00000621375 1004 ntTSL 5 BASIC21.25■□□□□ 0.99
APAF1O14727 AC018892.3-201ENST00000623986 2499 ntBASIC21.25■□□□□ 0.99
APAF1O14727 PPP2R5D-206ENST00000472118 2963 ntAPPRIS ALT2 TSL 5 BASIC21.25■□□□□ 0.99
APAF1O14727 AC090286.1-201ENST00000354432 1489 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
APAF1O14727 AP001282.1-201ENST00000531301 1499 ntBASIC21.25■□□□□ 0.99
APAF1O14727 C8orf76-201ENST00000276704 1341 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
APAF1O14727 TRPC3-202ENST00000379645 3548 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
APAF1O14727 U73166.1-201ENST00000439898 2625 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
APAF1O14727 WDR45-202ENST00000356463 1688 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
APAF1O14727 PRAL-201ENST00000624952 3286 ntBASIC21.24■□□□□ 0.99
APAF1O14727 ATP6AP2-217ENST00000636580 2337 ntAPPRIS P2 TSL 1 (best) BASIC21.24■□□□□ 0.99
APAF1O14727 AC097376.2-201ENST00000608661 2510 ntTSL 5 BASIC21.24■□□□□ 0.99
APAF1O14727 ARHGEF28-212ENST00000513042 6273 ntAPPRIS ALT2 TSL 5 BASIC21.24■□□□□ 0.99
APAF1O14727 TIPRL-202ENST00000367833 3032 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
APAF1O14727 SLC39A1-203ENST00000368621 2398 ntAPPRIS P1 TSL 2 BASIC21.24■□□□□ 0.99
APAF1O14727 FBXL5-201ENST00000341285 3385 ntAPPRIS P3 TSL 1 (best) BASIC21.24■□□□□ 0.99
APAF1O14727 TTC34-201ENST00000401095 8814 ntAPPRIS ALT2 TSL 5 BASIC21.24■□□□□ 0.99
APAF1O14727 RAP1GDS1-203ENST00000380158 2085 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
APAF1O14727 RPS6KA3-201ENST00000379565 7918 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
APAF1O14727 SALL4-203ENST00000395997 1918 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Retrieved 100 of 98,524 protein–RNA pairs in 29.2 ms