Protein–RNA interactions for Protein: O00148

DDX39A, ATP-dependent RNA helicase DDX39A, humanhuman

Known RBP Predictions only

Length 427 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39AO00148 CCDC181-206ENST00000491570 1652 ntTSL 2 BASIC18.21■□□□□ 0.51
DDX39AO00148 LRRC59-201ENST00000225972 2910 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
DDX39AO00148 KRT15-201ENST00000254043 5237 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
DDX39AO00148 TMTC2-201ENST00000321196 5681 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.5
DDX39AO00148 ADGRB2-203ENST00000398538 4675 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
DDX39AO00148 FBXO22-202ENST00000453211 1486 ntTSL 2 BASIC18.2■□□□□ 0.5
DDX39AO00148 TOM1-204ENST00000411850 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC18.2■□□□□ 0.5
DDX39AO00148 AC099398.1-201ENST00000567919 2776 ntBASIC18.2■□□□□ 0.5
DDX39AO00148 WDR6-202ENST00000415265 1883 ntTSL 2 BASIC18.2■□□□□ 0.5
DDX39AO00148 PDAP1-201ENST00000350498 2546 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
DDX39AO00148 PGR-209ENST00000617858 2816 ntTSL 5 BASIC18.2■□□□□ 0.5
DDX39AO00148 ZSCAN18-208ENST00000595944 1768 ntTSL 2 BASIC18.2■□□□□ 0.5
DDX39AO00148 TPD52L2-209ENST00000611972 2197 ntTSL 3 BASIC18.2■□□□□ 0.5
DDX39AO00148 MCM4-201ENST00000262105 4183 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
DDX39AO00148 TMEM229B-201ENST00000357461 4068 ntAPPRIS P1 TSL 2 BASIC18.2■□□□□ 0.5
DDX39AO00148 HOXB3-205ENST00000470495 4208 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
DDX39AO00148 GMNN-201ENST00000230056 1262 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
DDX39AO00148 CIB3-201ENST00000269878 711 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
DDX39AO00148 MUC1-201ENST00000337604 859 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
DDX39AO00148 CIB3-202ENST00000379859 467 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
DDX39AO00148 MRPS18AP1-201ENST00000414458 589 ntBASIC18.2■□□□□ 0.5
DDX39AO00148 PIGZ-204ENST00000443835 675 ntTSL 4 BASIC18.2■□□□□ 0.5
DDX39AO00148 AL139010.1-201ENST00000454878 894 ntBASIC18.2■□□□□ 0.5
DDX39AO00148 AC007406.4-201ENST00000539568 765 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
DDX39AO00148 AC015712.4-202ENST00000558641 1007 ntTSL 4 BASIC18.2■□□□□ 0.5
DDX39AO00148 AIDA-201ENST00000340020 3008 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
DDX39AO00148 SCART1-206ENST00000640237 4351 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
DDX39AO00148 TRAPPC2L-201ENST00000301021 2215 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
DDX39AO00148 GHR-201ENST00000230882 4560 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
DDX39AO00148 LINC01118-203ENST00000479311 1588 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
DDX39AO00148 STAT5A-201ENST00000345506 4301 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
DDX39AO00148 ABHD10-201ENST00000273359 2590 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
DDX39AO00148 FAM227B-201ENST00000299338 2008 ntAPPRIS P3 TSL 2 BASIC18.2■□□□□ 0.5
DDX39AO00148 SARAF-201ENST00000256255 2154 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
DDX39AO00148 NTNG1-202ENST00000370065 1485 ntTSL 5 BASIC18.2■□□□□ 0.5
DDX39AO00148 ILVBL-201ENST00000263383 2304 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
DDX39AO00148 CMTM3-202ENST00000424011 2330 ntAPPRIS P1 TSL 2 BASIC18.2■□□□□ 0.5
DDX39AO00148 HNF1A-216ENST00000617366 2473 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
DDX39AO00148 EIF2B4-212ENST00000622434 1771 ntTSL 5 BASIC18.19■□□□□ 0.5
DDX39AO00148 ATP2C1-218ENST00000510168 5067 ntAPPRIS ALT1 TSL 5 BASIC18.19■□□□□ 0.5
DDX39AO00148 HPN-201ENST00000262626 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
DDX39AO00148 CYMP-AS1-201ENST00000457402 2351 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
DDX39AO00148 NMRAL1-201ENST00000283429 1376 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
DDX39AO00148 HSFX1-201ENST00000370416 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
DDX39AO00148 TRAF3IP1-202ENST00000391993 4003 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
DDX39AO00148 TOM1L2-201ENST00000318094 2259 ntTSL 2 BASIC18.19■□□□□ 0.5
DDX39AO00148 EIF4G3-212ENST00000602326 6196 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
DDX39AO00148 TMEM41A-201ENST00000296254 1060 ntTSL 2 BASIC18.19■□□□□ 0.5
DDX39AO00148 NUDT4P1-201ENST00000322209 1206 ntAPPRIS P1 BASIC18.19■□□□□ 0.5
DDX39AO00148 RNLS-201ENST00000331772 1447 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
DDX39AO00148 RBM3-202ENST00000376755 1130 ntAPPRIS P1 TSL 2 BASIC18.19■□□□□ 0.5
DDX39AO00148 VCX3A-201ENST00000381089 995 ntAPPRIS P2 TSL 1 (best) BASIC18.19■□□□□ 0.5
DDX39AO00148 SAE1-202ENST00000392776 1851 ntTSL 3 BASIC18.19■□□□□ 0.5
DDX39AO00148 CENPM-206ENST00000407253 818 ntTSL 2 BASIC18.19■□□□□ 0.5
DDX39AO00148 AC093702.1-201ENST00000423433 367 ntTSL 3 BASIC18.19■□□□□ 0.5
DDX39AO00148 LY6E-204ENST00000519546 971 ntTSL 2 BASIC18.19■□□□□ 0.5
DDX39AO00148 AC137894.1-201ENST00000526431 547 ntTSL 2 BASIC18.19■□□□□ 0.5
DDX39AO00148 GREM1-201ENST00000560677 623 ntTSL 4 BASIC18.19■□□□□ 0.5
DDX39AO00148 C18orf21-207ENST00000610527 1059 ntTSL 2 BASIC18.19■□□□□ 0.5
DDX39AO00148 GFY-202ENST00000610896 1557 ntAPPRIS P1 TSL 2 BASIC18.19■□□□□ 0.5
DDX39AO00148 C18orf21-208ENST00000618334 856 ntTSL 3 BASIC18.19■□□□□ 0.5
DDX39AO00148 LRRC47-201ENST00000378251 4310 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
DDX39AO00148 BMP3-201ENST00000282701 5734 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
DDX39AO00148 STKLD1-201ENST00000371957 2825 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
DDX39AO00148 SLC17A7-204ENST00000600601 2237 ntTSL 2 BASIC18.19■□□□□ 0.5
DDX39AO00148 FBXO18-203ENST00000397269 3640 ntTSL 5 BASIC18.19■□□□□ 0.5
DDX39AO00148 DMAC2-210ENST00000592922 1622 ntTSL 2 BASIC18.19■□□□□ 0.5
DDX39AO00148 HACD3-206ENST00000565299 1465 ntTSL 5 BASIC18.19■□□□□ 0.5
DDX39AO00148 ADAM6-201ENST00000606026 1843 ntTSL 2 BASIC18.19■□□□□ 0.5
DDX39AO00148 CENPN-202ENST00000305850 2481 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
DDX39AO00148 ANKMY1-202ENST00000361678 2499 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
DDX39AO00148 TAF3-201ENST00000344293 4872 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
DDX39AO00148 NEIL2-204ENST00000455213 2323 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
DDX39AO00148 FHL2-205ENST00000393353 1531 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
DDX39AO00148 SCRIB-202ENST00000356994 5218 ntAPPRIS P4 TSL 2 BASIC18.18■□□□□ 0.5
DDX39AO00148 SUSD4-202ENST00000343846 3480 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
DDX39AO00148 PSMF1-201ENST00000246015 2042 ntAPPRIS ALT1 TSL 3 BASIC18.18■□□□□ 0.5
DDX39AO00148 PCBP4-202ENST00000355852 2015 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
DDX39AO00148 SP100-204ENST00000409341 1898 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
DDX39AO00148 PLPPR4-203ENST00000457765 4846 ntTSL 2 BASIC18.18■□□□□ 0.5
DDX39AO00148 MDM2-209ENST00000393412 1404 ntTSL 5 BASIC18.18■□□□□ 0.5
DDX39AO00148 SLC30A1-201ENST00000367001 5474 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
DDX39AO00148 TMEM65-201ENST00000297632 9029 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
DDX39AO00148 PEPD-202ENST00000397032 1754 ntTSL 2 BASIC18.18■□□□□ 0.5
DDX39AO00148 MGRN1-201ENST00000262370 3968 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
DDX39AO00148 DKKL1-201ENST00000221498 1222 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
DDX39AO00148 EBI3-201ENST00000221847 1186 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
DDX39AO00148 C2orf40-201ENST00000238044 789 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
DDX39AO00148 CD8B-201ENST00000331469 832 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
DDX39AO00148 PSMB9-207ENST00000374859 782 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
DDX39AO00148 PSMB9-208ENST00000395330 792 ntTSL 3 BASIC18.18■□□□□ 0.5
DDX39AO00148 CYSRT1-201ENST00000409414 1297 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
DDX39AO00148 FXYD1-202ENST00000455515 594 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
DDX39AO00148 MIR210HG-203ENST00000533920 816 ntTSL 2 BASIC18.18■□□□□ 0.5
DDX39AO00148 TOMM5-205ENST00000544379 635 ntTSL 2 BASIC18.18■□□□□ 0.5
DDX39AO00148 PPHLN1-221ENST00000552761 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
DDX39AO00148 NDRG4-247ENST00000568640 1281 ntTSL 2 BASIC18.18■□□□□ 0.5
DDX39AO00148 AL844908.2-201ENST00000609461 460 ntBASIC18.18■□□□□ 0.5
DDX39AO00148 MIR155HG-201ENST00000456917 1600 ntTSL 5 BASIC18.18■□□□□ 0.5
DDX39AO00148 MMEL1-201ENST00000378412 2849 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 81.4 ms