Protein–RNA interactions for Protein: H7C350

CCDC188, Coiled-coil domain-containing protein 188, humanhuman

Predictions only

Length 402 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC188H7C350 ALDH1A2-201ENST00000249750 4098 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CCDC188H7C350 TPM1-203ENST00000317516 738 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
CCDC188H7C350 TYMS-202ENST00000323250 693 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
CCDC188H7C350 AGTRAP-205ENST00000400895 786 ntTSL 2 BASIC16.88■□□□□ 0.29
CCDC188H7C350 C16orf91-201ENST00000442039 978 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CCDC188H7C350 TM4SF19-TCTEX1D2-201ENST00000442633 964 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CCDC188H7C350 AC106771.1-201ENST00000502209 372 ntTSL 2 BASIC16.88■□□□□ 0.29
CCDC188H7C350 SLC30A5-203ENST00000502979 681 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
CCDC188H7C350 NDUFB9-204ENST00000518008 789 ntTSL 2 BASIC16.88■□□□□ 0.29
CCDC188H7C350 TMEM218-203ENST00000526175 972 ntAPPRIS P1 TSL 3 BASIC16.88■□□□□ 0.29
CCDC188H7C350 TRPC2-202ENST00000526541 1189 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
CCDC188H7C350 AP003555.3-201ENST00000534086 432 ntTSL 4 BASIC16.88■□□□□ 0.29
CCDC188H7C350 TPM1-218ENST00000559281 851 ntTSL 5 BASIC16.88■□□□□ 0.29
CCDC188H7C350 FGF11-204ENST00000575235 928 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
CCDC188H7C350 AL121772.3-201ENST00000610840 674 ntBASIC16.88■□□□□ 0.29
CCDC188H7C350 GRTP1-205ENST00000620217 1073 ntTSL 2 BASIC16.88■□□□□ 0.29
CCDC188H7C350 TP53I11-223ENST00000627720 195 ntTSL 5 BASIC16.88■□□□□ 0.29
CCDC188H7C350 CUX1-211ENST00000546411 4212 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
CCDC188H7C350 TMEM216-201ENST00000334888 1306 ntAPPRIS ALT2 TSL 2 BASIC16.88■□□□□ 0.29
CCDC188H7C350 PVR-204ENST00000406449 1344 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
CCDC188H7C350 AL953897.1-201ENST00000376620 1868 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
CCDC188H7C350 AC068587.6-202ENST00000641839 5619 ntBASIC16.88■□□□□ 0.29
CCDC188H7C350 SEMA4C-201ENST00000305476 3545 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CCDC188H7C350 ATP11A-AS1-201ENST00000446442 2192 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
CCDC188H7C350 TSNARE1-201ENST00000307180 1907 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
CCDC188H7C350 AC090616.6-203ENST00000579186 1945 ntBASIC16.88■□□□□ 0.29
CCDC188H7C350 LCA10-201ENST00000618311 1392 ntTSL 2 BASIC16.88■□□□□ 0.29
CCDC188H7C350 POM121C-206ENST00000607367 3690 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
CCDC188H7C350 KIAA1841-201ENST00000295031 3116 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
CCDC188H7C350 ATP6V1E1-201ENST00000253413 1402 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CCDC188H7C350 NFE2L2-201ENST00000397062 2853 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
CCDC188H7C350 PKD1L2-209ENST00000531391 1488 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
CCDC188H7C350 GPN3-202ENST00000537466 1491 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
CCDC188H7C350 ADAMTS18-201ENST00000282849 5913 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CCDC188H7C350 PI16-203ENST00000611814 2083 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
CCDC188H7C350 EDN3-201ENST00000311585 2655 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
CCDC188H7C350 CNKSR1-214ENST00000531191 2673 ntTSL 5 BASIC16.87■□□□□ 0.29
CCDC188H7C350 PLPP3-201ENST00000371250 3292 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CCDC188H7C350 ORMDL3-204ENST00000579695 2106 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CCDC188H7C350 CPEB1-211ENST00000615198 2112 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
CCDC188H7C350 FOXRED2-204ENST00000397224 4967 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CCDC188H7C350 GPS1-208ENST00000578552 1874 ntAPPRIS ALT1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CCDC188H7C350 SLC44A2-203ENST00000586078 3784 ntTSL 5 BASIC16.87■□□□□ 0.29
CCDC188H7C350 ETV5-206ENST00000434744 2213 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CCDC188H7C350 TRIM36-203ENST00000379618 693 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
CCDC188H7C350 ODF3B-202ENST00000401779 869 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
CCDC188H7C350 ODF3B-203ENST00000403326 643 ntTSL 3 BASIC16.87■□□□□ 0.29
CCDC188H7C350 AL162258.2-202ENST00000469931 831 ntTSL 5 BASIC16.87■□□□□ 0.29
CCDC188H7C350 RBPMS-AS1-202ENST00000519753 1031 ntTSL 5 BASIC16.87■□□□□ 0.29
CCDC188H7C350 CYB561-216ENST00000582297 897 ntTSL 3 BASIC16.87■□□□□ 0.29
CCDC188H7C350 SLC9A3-AS1-204ENST00000606288 791 ntTSL 2 BASIC16.87■□□□□ 0.29
CCDC188H7C350 HADH-212ENST00000638621 741 ntTSL 5 BASIC16.87■□□□□ 0.29
CCDC188H7C350 HNRNPU-204ENST00000440865 3207 ntTSL 2 BASIC16.87■□□□□ 0.29
CCDC188H7C350 KCNH3-201ENST00000257981 3867 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CCDC188H7C350 C1QTNF6-202ENST00000397110 1647 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CCDC188H7C350 C2orf27A-205ENST00000624391 1335 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
CCDC188H7C350 ZBTB37-203ENST00000367704 2323 ntTSL 2 BASIC16.87■□□□□ 0.29
CCDC188H7C350 AC138904.3-201ENST00000635780 2681 ntTSL 5 BASIC16.87■□□□□ 0.29
CCDC188H7C350 DFNA5-202ENST00000409775 1689 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CCDC188H7C350 NPAS2-201ENST00000335681 4007 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CCDC188H7C350 TNFSF13-202ENST00000349228 2036 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
CCDC188H7C350 AP002414.2-201ENST00000591780 3365 ntBASIC16.87■□□□□ 0.29
CCDC188H7C350 NOVA2-201ENST00000263257 7803 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CCDC188H7C350 PTGES3L-AARSD1-201ENST00000360221 1790 ntTSL 2 BASIC16.87■□□□□ 0.29
CCDC188H7C350 CNN1-210ENST00000592923 1848 ntTSL 2 BASIC16.86■□□□□ 0.29
CCDC188H7C350 SMARCD1-202ENST00000394963 3658 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CCDC188H7C350 ASAH1-210ENST00000520781 2245 ntTSL 2 BASIC16.86■□□□□ 0.29
CCDC188H7C350 SLC25A27-201ENST00000371347 2963 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CCDC188H7C350 CYP4F22-201ENST00000269703 2641 ntAPPRIS P1 TSL 2 BASIC16.86■□□□□ 0.29
CCDC188H7C350 SNX5-202ENST00000377768 2288 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CCDC188H7C350 NSUN5-203ENST00000428206 2269 ntAPPRIS ALT2 TSL 2 BASIC16.86■□□□□ 0.29
CCDC188H7C350 BEGAIN-201ENST00000355173 2674 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
CCDC188H7C350 MROH6-201ENST00000398882 3469 ntAPPRIS P2 TSL 5 BASIC16.86■□□□□ 0.29
CCDC188H7C350 ERRFI1-201ENST00000377482 3104 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CCDC188H7C350 INPP5J-204ENST00000402238 1564 ntTSL 2 BASIC16.86■□□□□ 0.29
CCDC188H7C350 CLCN2-202ENST00000344937 3187 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
CCDC188H7C350 OTUD3-201ENST00000375120 6397 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CCDC188H7C350 PCTP-201ENST00000268896 2044 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CCDC188H7C350 KLHDC2-206ENST00000554589 1641 ntTSL 5 BASIC16.86■□□□□ 0.29
CCDC188H7C350 LFNG-204ENST00000402045 2058 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
CCDC188H7C350 EIF2B3-201ENST00000360403 1659 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CCDC188H7C350 OASL-204ENST00000620239 1695 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
CCDC188H7C350 CYP27B1-201ENST00000228606 2540 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CCDC188H7C350 DHDH-201ENST00000221403 1081 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CCDC188H7C350 PAFAH1B3-201ENST00000262890 1003 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CCDC188H7C350 ATP5J-201ENST00000284971 614 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CCDC188H7C350 PRSS38-201ENST00000366757 1267 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CCDC188H7C350 DNAH14-205ENST00000366850 1103 ntTSL 5 BASIC16.86■□□□□ 0.29
CCDC188H7C350 ARPC4-203ENST00000433034 926 ntTSL 3 BASIC16.86■□□□□ 0.29
CCDC188H7C350 KRT18P31-201ENST00000506277 1292 ntBASIC16.86■□□□□ 0.29
CCDC188H7C350 KRT18P21-201ENST00000515767 1272 ntBASIC16.86■□□□□ 0.29
CCDC188H7C350 AC021739.2-201ENST00000558375 964 ntTSL 5 BASIC16.86■□□□□ 0.29
CCDC188H7C350 IRF8-202ENST00000562492 946 ntTSL 3 BASIC16.86■□□□□ 0.29
CCDC188H7C350 PAM16-208ENST00000573553 722 ntTSL 2 BASIC16.86■□□□□ 0.29
CCDC188H7C350 REXO1L6P-202ENST00000619970 1078 ntBASIC16.86■□□□□ 0.29
CCDC188H7C350 AL358472.4-201ENST00000633140 710 ntBASIC16.86■□□□□ 0.29
CCDC188H7C350 TLE3-223ENST00000560939 3021 ntTSL 5 BASIC16.86■□□□□ 0.29
CCDC188H7C350 JMJD1C-202ENST00000399262 8666 ntAPPRIS P3 TSL 5 BASIC16.86■□□□□ 0.29
CCDC188H7C350 ACOXL-201ENST00000340561 2188 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
CCDC188H7C350 CYP21A2-221ENST00000418967 2182 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 40.3 ms