Protein–RNA interactions for Protein: E9PIF3

NPIPA2, Nuclear pore complex-interacting protein family member A2, humanhuman

Predictions only

Length 369 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA2E9PIF3 COMMD4-207ENST00000562789 746 ntTSL 2 BASIC14.78□□□□□ -0.04
NPIPA2E9PIF3 MRPL34-202ENST00000594999 555 ntAPPRIS P2 TSL 2 BASIC14.78□□□□□ -0.04
NPIPA2E9PIF3 LINC02560-201ENST00000596379 459 ntBASIC14.78□□□□□ -0.04
NPIPA2E9PIF3 FAM92A-219ENST00000620645 1014 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
NPIPA2E9PIF3 PHF1-202ENST00000374516 2330 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
NPIPA2E9PIF3 SART1-201ENST00000312397 3293 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
NPIPA2E9PIF3 PCM1-206ENST00000518537 2171 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
NPIPA2E9PIF3 NACC2-201ENST00000277554 6899 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
NPIPA2E9PIF3 AC112229.1-202ENST00000490013 2918 ntTSL 2 BASIC14.78□□□□□ -0.04
NPIPA2E9PIF3 DOK4-201ENST00000340099 2772 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
NPIPA2E9PIF3 TMEM39B-201ENST00000336294 1813 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
NPIPA2E9PIF3 FAM49B-202ENST00000517654 1817 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
NPIPA2E9PIF3 ELN-206ENST00000380553 2703 ntAPPRIS ALT2 TSL 2 BASIC14.78□□□□□ -0.04
NPIPA2E9PIF3 SLC43A3-203ENST00000395124 2617 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
NPIPA2E9PIF3 IBA57-201ENST00000366711 7817 ntAPPRIS P1 TSL 2 BASIC14.78□□□□□ -0.04
NPIPA2E9PIF3 MYCL-203ENST00000397332 3256 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.04
NPIPA2E9PIF3 TOM1-204ENST00000411850 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC14.77□□□□□ -0.04
NPIPA2E9PIF3 CARD11-203ENST00000396946 4366 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
NPIPA2E9PIF3 SLC22A11-203ENST00000377585 2124 ntTSL 2 BASIC14.77□□□□□ -0.04
NPIPA2E9PIF3 PER1-201ENST00000317276 4707 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
NPIPA2E9PIF3 SLC9A7-205ENST00000616978 10024 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.04
NPIPA2E9PIF3 AC009292.1-201ENST00000502156 1986 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
NPIPA2E9PIF3 BCAN-202ENST00000361588 2563 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
NPIPA2E9PIF3 MRPL16-201ENST00000300151 1182 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
NPIPA2E9PIF3 FKBP2-201ENST00000309366 657 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
NPIPA2E9PIF3 MUC1-201ENST00000337604 859 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.05
NPIPA2E9PIF3 MRNIP-202ENST00000376931 1004 ntAPPRIS ALT2 TSL 2 BASIC14.77□□□□□ -0.05
NPIPA2E9PIF3 HNRNPA3P1-201ENST00000401429 1139 ntBASIC14.77□□□□□ -0.05
NPIPA2E9PIF3 AC008443.3-201ENST00000412295 549 ntTSL 4 BASIC14.77□□□□□ -0.05
NPIPA2E9PIF3 AL353597.1-201ENST00000414875 998 ntTSL 5 BASIC14.77□□□□□ -0.05
NPIPA2E9PIF3 SNHG17-203ENST00000417578 880 ntTSL 2 BASIC14.77□□□□□ -0.05
NPIPA2E9PIF3 C6orf47-AS1-203ENST00000422049 673 ntTSL 2 BASIC14.77□□□□□ -0.05
NPIPA2E9PIF3 AC007405.3-202ENST00000426475 660 ntTSL 3 BASIC14.77□□□□□ -0.05
NPIPA2E9PIF3 AC016735.2-201ENST00000438736 569 ntTSL 4 BASIC14.77□□□□□ -0.05
NPIPA2E9PIF3 AL359764.1-201ENST00000444330 504 ntTSL 3 BASIC14.77□□□□□ -0.05
NPIPA2E9PIF3 HNRNPA3P5-201ENST00000455201 833 ntBASIC14.77□□□□□ -0.05
NPIPA2E9PIF3 CCDC159-201ENST00000458408 1062 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.05
NPIPA2E9PIF3 AC114956.2-201ENST00000512498 572 ntTSL 4 BASIC14.77□□□□□ -0.05
NPIPA2E9PIF3 MIR210HG-203ENST00000533920 816 ntTSL 2 BASIC14.77□□□□□ -0.05
NPIPA2E9PIF3 AC013565.3-201ENST00000565547 450 ntTSL 3 BASIC14.77□□□□□ -0.05
NPIPA2E9PIF3 PFN1-203ENST00000574872 1173 ntTSL 2 BASIC14.77□□□□□ -0.05
NPIPA2E9PIF3 AC116003.1-201ENST00000578340 536 ntTSL 3 BASIC14.77□□□□□ -0.05
NPIPA2E9PIF3 AC006116.8-201ENST00000587004 987 ntTSL 2 BASIC14.77□□□□□ -0.05
NPIPA2E9PIF3 AC098484.3-202ENST00000603943 1011 ntAPPRIS P5 TSL 5 BASIC14.77□□□□□ -0.05
NPIPA2E9PIF3 AL138828.2-201ENST00000615812 383 ntBASIC14.77□□□□□ -0.05
NPIPA2E9PIF3 SPDYE12P-201ENST00000618416 771 ntBASIC14.77□□□□□ -0.05
NPIPA2E9PIF3 AL590560.3-201ENST00000623350 461 ntBASIC14.77□□□□□ -0.05
NPIPA2E9PIF3 RBPJL-201ENST00000343694 2489 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.05
NPIPA2E9PIF3 CADPS2-204ENST00000412584 4308 ntAPPRIS P2 TSL 1 (best) BASIC14.77□□□□□ -0.05
NPIPA2E9PIF3 MEIS3-206ENST00000559524 1828 ntAPPRIS P3 TSL 2 BASIC14.77□□□□□ -0.05
NPIPA2E9PIF3 ZNF408-201ENST00000311764 2442 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
NPIPA2E9PIF3 CLIC5-202ENST00000339561 2390 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
NPIPA2E9PIF3 NT5C3A-204ENST00000405342 1759 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.05
NPIPA2E9PIF3 DNAJB8-AS1-201ENST00000471626 1798 ntTSL 2 BASIC14.77□□□□□ -0.05
NPIPA2E9PIF3 ITPR3-201ENST00000374316 9870 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.05
NPIPA2E9PIF3 LINC01144-201ENST00000626198 1710 ntBASIC14.77□□□□□ -0.05
NPIPA2E9PIF3 TMEM30A-201ENST00000230461 4594 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
NPIPA2E9PIF3 TNN-201ENST00000239462 5008 ntAPPRIS P1 TSL 2 BASIC14.77□□□□□ -0.05
NPIPA2E9PIF3 MFSD4B-201ENST00000368847 5958 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
NPIPA2E9PIF3 ARHGEF25-208ENST00000616622 2103 ntTSL 2 BASIC14.77□□□□□ -0.05
NPIPA2E9PIF3 RAPGEFL1-209ENST00000544503 2079 ntTSL 2 BASIC14.77□□□□□ -0.05
NPIPA2E9PIF3 TMC7-201ENST00000304381 3640 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
NPIPA2E9PIF3 AC006974.1-201ENST00000637928 1501 ntTSL 5 BASIC14.76□□□□□ -0.05
NPIPA2E9PIF3 FAM156B-207ENST00000616419 2032 ntAPPRIS P2 TSL 2 BASIC14.76□□□□□ -0.05
NPIPA2E9PIF3 FAM156A-212ENST00000617970 2032 ntAPPRIS P2 TSL 2 BASIC14.76□□□□□ -0.05
NPIPA2E9PIF3 TRIM14-201ENST00000341469 4454 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
NPIPA2E9PIF3 PANX2-201ENST00000159647 2964 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
NPIPA2E9PIF3 HGNC:18790-211ENST00000621129 1483 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
NPIPA2E9PIF3 PITPNA-201ENST00000313486 3912 ntAPPRIS P2 TSL 5 BASIC14.76□□□□□ -0.05
NPIPA2E9PIF3 BRIX1-201ENST00000336767 1926 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
NPIPA2E9PIF3 ALOX12P2-203ENST00000570921 1945 ntBASIC14.76□□□□□ -0.05
NPIPA2E9PIF3 CCDC130-204ENST00000586600 1922 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
NPIPA2E9PIF3 GOLGA2P9-201ENST00000596977 1937 ntBASIC14.76□□□□□ -0.05
NPIPA2E9PIF3 SUCO-204ENST00000608151 5790 ntTSL 5 BASIC14.76□□□□□ -0.05
NPIPA2E9PIF3 SGPP1-201ENST00000247225 3312 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
NPIPA2E9PIF3 HEPN1-201ENST00000408930 1434 ntAPPRIS P1 BASIC14.76□□□□□ -0.05
NPIPA2E9PIF3 TMEM53-203ENST00000372242 1846 ntTSL 3 BASIC14.76□□□□□ -0.05
NPIPA2E9PIF3 ATG5-210ENST00000636437 2261 ntTSL 5 BASIC14.76□□□□□ -0.05
NPIPA2E9PIF3 OPA1-201ENST00000361150 6330 ntTSL 5 BASIC14.76□□□□□ -0.05
NPIPA2E9PIF3 PHRF1-203ENST00000416188 5227 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
NPIPA2E9PIF3 FAM49B-223ENST00000522746 2196 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
NPIPA2E9PIF3 CD8B-201ENST00000331469 832 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
NPIPA2E9PIF3 CHIA-203ENST00000353665 1214 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
NPIPA2E9PIF3 FAM220BP-201ENST00000377689 816 ntBASIC14.76□□□□□ -0.05
NPIPA2E9PIF3 FAM207CP-201ENST00000443486 507 ntBASIC14.76□□□□□ -0.05
NPIPA2E9PIF3 CD28-203ENST00000458610 705 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
NPIPA2E9PIF3 C3orf14-202ENST00000462069 631 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
NPIPA2E9PIF3 SATB1-217ENST00000493952 626 ntTSL 3 BASIC14.76□□□□□ -0.05
NPIPA2E9PIF3 C5orf66-202ENST00000507641 547 ntTSL 3 BASIC14.76□□□□□ -0.05
NPIPA2E9PIF3 ERGIC1-212ENST00000523291 586 ntTSL 2 BASIC14.76□□□□□ -0.05
NPIPA2E9PIF3 AC131009.1-201ENST00000539078 426 ntTSL 5 BASIC14.76□□□□□ -0.05
NPIPA2E9PIF3 TOMM5-205ENST00000544379 635 ntTSL 2 BASIC14.76□□□□□ -0.05
NPIPA2E9PIF3 AL162231.3-201ENST00000556278 902 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
NPIPA2E9PIF3 HEXIM2-206ENST00000591576 1176 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
NPIPA2E9PIF3 HDDC2-203ENST00000608284 538 ntTSL 3 BASIC14.76□□□□□ -0.05
NPIPA2E9PIF3 AC008761.3-201ENST00000624803 892 ntBASIC14.76□□□□□ -0.05
NPIPA2E9PIF3 HIST1H3D-202ENST00000635200 948 ntAPPRIS P1 TSL 3 BASIC14.76□□□□□ -0.05
NPIPA2E9PIF3 NUDT16-203ENST00000537561 5943 ntTSL 5 BASIC14.76□□□□□ -0.05
NPIPA2E9PIF3 APOPT1-201ENST00000409074 2523 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
NPIPA2E9PIF3 TTC6-206ENST00000553443 5833 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 61.1 ms