Protein–RNA interactions for Protein: A6NKF7

TMEM88B, Transmembrane protein 88B, humanhuman

Predictions only

Length 163 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM88BA6NKF7 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
TMEM88BA6NKF7 FAM189B-204ENST00000368368 2609 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
TMEM88BA6NKF7 TBC1D26-206ENST00000579428 1583 ntTSL 2 BASIC18.51■□□□□ 0.55
TMEM88BA6NKF7 CNTNAP3B-203ENST00000377561 5379 ntAPPRIS P2 TSL 1 (best) BASIC18.5■□□□□ 0.55
TMEM88BA6NKF7 NOS2P2-202ENST00000639528 1659 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
TMEM88BA6NKF7 BNIP1-201ENST00000231668 1339 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
TMEM88BA6NKF7 CXorf40B-202ENST00000370404 1316 ntAPPRIS P2 TSL 2 BASIC18.5■□□□□ 0.55
TMEM88BA6NKF7 CENPBD1P1-204ENST00000487264 1308 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
TMEM88BA6NKF7 GFOD2-201ENST00000268797 2126 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
TMEM88BA6NKF7 VRK1-201ENST00000216639 1745 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
TMEM88BA6NKF7 KRT6C-201ENST00000252250 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
TMEM88BA6NKF7 KRT6B-201ENST00000252252 2282 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
TMEM88BA6NKF7 FAM24B-202ENST00000368898 745 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
TMEM88BA6NKF7 IGLJ3-201ENST00000390324 176 ntAPPRIS P1 BASIC18.5■□□□□ 0.55
TMEM88BA6NKF7 CRCP-204ENST00000398684 492 ntTSL 2 BASIC18.5■□□□□ 0.55
TMEM88BA6NKF7 AL109741.1-201ENST00000432195 403 ntTSL 2 BASIC18.5■□□□□ 0.55
TMEM88BA6NKF7 AC063977.3-201ENST00000597569 547 ntTSL 4 BASIC18.5■□□□□ 0.55
TMEM88BA6NKF7 AC107373.2-201ENST00000607735 490 ntBASIC18.5■□□□□ 0.55
TMEM88BA6NKF7 AC073352.2-201ENST00000609385 439 ntBASIC18.5■□□□□ 0.55
TMEM88BA6NKF7 AC244157.2-201ENST00000616239 1006 ntBASIC18.5■□□□□ 0.55
TMEM88BA6NKF7 COX6A1P2-201ENST00000620597 330 ntBASIC18.5■□□□□ 0.55
TMEM88BA6NKF7 LRWD1-209ENST00000626402 138 ntTSL 3 BASIC18.5■□□□□ 0.55
TMEM88BA6NKF7 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC18.5■□□□□ 0.55
TMEM88BA6NKF7 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
TMEM88BA6NKF7 GNAI2-207ENST00000451956 1486 ntTSL 2 BASIC18.5■□□□□ 0.55
TMEM88BA6NKF7 DDX55-203ENST00000421670 1574 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
TMEM88BA6NKF7 SGCZ-201ENST00000382080 2234 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
TMEM88BA6NKF7 MYCN-202ENST00000638417 1693 ntTSL 2 BASIC18.5■□□□□ 0.55
TMEM88BA6NKF7 HMOX2-205ENST00000458134 1797 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
TMEM88BA6NKF7 MPP2-206ENST00000518766 1896 ntTSL 2 BASIC18.5■□□□□ 0.55
TMEM88BA6NKF7 GCDH-201ENST00000222214 1956 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
TMEM88BA6NKF7 IQSEC1-201ENST00000273221 5279 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
TMEM88BA6NKF7 IGSF8-205ENST00000614243 2191 ntAPPRIS P2 TSL 1 (best) BASIC18.49■□□□□ 0.55
TMEM88BA6NKF7 UBXN11-207ENST00000374223 1312 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
TMEM88BA6NKF7 SULT2B1-202ENST00000323090 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
TMEM88BA6NKF7 CCDC120-206ENST00000603986 2379 ntAPPRIS ALT2 TSL 2 BASIC18.49■□□□□ 0.55
TMEM88BA6NKF7 IKZF4-206ENST00000547791 1712 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
TMEM88BA6NKF7 GGT4P-201ENST00000623672 1708 ntBASIC18.49■□□□□ 0.55
TMEM88BA6NKF7 BTBD11-201ENST00000280758 5767 ntAPPRIS P3 TSL 5 BASIC18.49■□□□□ 0.55
TMEM88BA6NKF7 TSNARE1-201ENST00000307180 1907 ntAPPRIS ALT2 TSL 5 BASIC18.49■□□□□ 0.55
TMEM88BA6NKF7 BATF-201ENST00000286639 980 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
TMEM88BA6NKF7 NDUFAB1P1-201ENST00000404262 460 ntBASIC18.49■□□□□ 0.55
TMEM88BA6NKF7 NIF3L1-205ENST00000409588 1269 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
TMEM88BA6NKF7 NCBP2-203ENST00000422610 676 ntTSL 2 BASIC18.49■□□□□ 0.55
TMEM88BA6NKF7 RPL37A-203ENST00000427280 698 ntTSL 5 BASIC18.49■□□□□ 0.55
TMEM88BA6NKF7 SIRPB2-203ENST00000444444 884 ntTSL 2 BASIC18.49■□□□□ 0.55
TMEM88BA6NKF7 AC234782.1-201ENST00000451950 919 ntBASIC18.49■□□□□ 0.55
TMEM88BA6NKF7 RPL37A-206ENST00000456586 401 ntTSL 5 BASIC18.49■□□□□ 0.55
TMEM88BA6NKF7 C14orf132-202ENST00000553782 536 ntTSL 4 BASIC18.49■□□□□ 0.55
TMEM88BA6NKF7 RPL37A-211ENST00000598925 775 ntTSL 5 BASIC18.49■□□□□ 0.55
TMEM88BA6NKF7 EPB41L4B-201ENST00000374557 4006 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
TMEM88BA6NKF7 ASGR1-208ENST00000574388 1552 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
TMEM88BA6NKF7 DUSP13-203ENST00000372702 1778 ntAPPRIS ALT1 TSL 1 (best) BASIC18.49■□□□□ 0.55
TMEM88BA6NKF7 COMMD6-203ENST00000377615 1793 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
TMEM88BA6NKF7 SLC2A4-204ENST00000571308 1768 ntTSL 5 BASIC18.49■□□□□ 0.55
TMEM88BA6NKF7 AGXT-201ENST00000307503 1865 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
TMEM88BA6NKF7 ACSM1-204ENST00000520010 1894 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
TMEM88BA6NKF7 CHGA-201ENST00000216492 2063 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
TMEM88BA6NKF7 SDHA-204ENST00000504309 2067 ntTSL 5 BASIC18.49■□□□□ 0.55
TMEM88BA6NKF7 ABLIM2-202ENST00000361581 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
TMEM88BA6NKF7 OLFM1-201ENST00000252854 2591 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
TMEM88BA6NKF7 CCDC92-201ENST00000238156 2787 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
TMEM88BA6NKF7 FAM222A-202ENST00000538780 3294 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
TMEM88BA6NKF7 VIPR1-204ENST00000438259 2427 ntTSL 2 BASIC18.49■□□□□ 0.55
TMEM88BA6NKF7 CRLF2-203ENST00000400841 1639 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
TMEM88BA6NKF7 ZDHHC5-201ENST00000287169 4666 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
TMEM88BA6NKF7 CDPF1-204ENST00000404744 1541 ntTSL 3 BASIC18.49■□□□□ 0.55
TMEM88BA6NKF7 AC004408.2-201ENST00000623613 2777 ntBASIC18.48■□□□□ 0.55
TMEM88BA6NKF7 DIDO1-203ENST00000370366 2383 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
TMEM88BA6NKF7 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC18.48■□□□□ 0.55
TMEM88BA6NKF7 LAT2-201ENST00000275635 1869 ntAPPRIS P2 TSL 1 (best) BASIC18.48■□□□□ 0.55
TMEM88BA6NKF7 SUPT20H-203ENST00000360252 2843 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
TMEM88BA6NKF7 U2AF2-201ENST00000308924 1698 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
TMEM88BA6NKF7 SSR4-201ENST00000320857 1671 ntAPPRIS P1 TSL 2 BASIC18.48■□□□□ 0.55
TMEM88BA6NKF7 KRT35-202ENST00000393989 1670 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
TMEM88BA6NKF7 P2RY4-201ENST00000374519 1595 ntAPPRIS P1 BASIC18.48■□□□□ 0.55
TMEM88BA6NKF7 ORAI2-202ENST00000403646 2528 ntAPPRIS P1 TSL 2 BASIC18.48■□□□□ 0.55
TMEM88BA6NKF7 DMAC2-204ENST00000438807 1454 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
TMEM88BA6NKF7 MGME1-203ENST00000377710 2336 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
TMEM88BA6NKF7 CCL25-201ENST00000253451 953 ntAPPRIS ALT2 TSL 2 BASIC18.48■□□□□ 0.55
TMEM88BA6NKF7 SYCE2-201ENST00000293695 1231 ntAPPRIS P2 TSL 1 (best) BASIC18.48■□□□□ 0.55
TMEM88BA6NKF7 EDF1-202ENST00000371648 809 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
TMEM88BA6NKF7 LYPLA2-202ENST00000374502 1072 ntTSL 2 BASIC18.48■□□□□ 0.55
TMEM88BA6NKF7 SMS-201ENST00000379404 1174 ntTSL 3 BASIC18.48■□□□□ 0.55
TMEM88BA6NKF7 KRTAP20-4-201ENST00000382828 224 ntAPPRIS P1 BASIC18.48■□□□□ 0.55
TMEM88BA6NKF7 PARVG-202ENST00000415224 999 ntTSL 2 BASIC18.48■□□□□ 0.55
TMEM88BA6NKF7 LINC01352-201ENST00000431347 962 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
TMEM88BA6NKF7 AC098935.1-201ENST00000446057 611 ntBASIC18.48■□□□□ 0.55
TMEM88BA6NKF7 NME2-207ENST00000514264 850 ntAPPRIS P1 TSL 2 BASIC18.48■□□□□ 0.55
TMEM88BA6NKF7 PPP1R32-205ENST00000538185 1107 ntTSL 2 BASIC18.48■□□□□ 0.55
TMEM88BA6NKF7 SAXO2-207ENST00000566861 404 ntAPPRIS ALT2 TSL 2 BASIC18.48■□□□□ 0.55
TMEM88BA6NKF7 SMCO4-206ENST00000596676 180 ntAPPRIS P1 BASIC18.48■□□□□ 0.55
TMEM88BA6NKF7 ZNF528-AS1-202ENST00000596746 929 ntTSL 5 BASIC18.48■□□□□ 0.55
TMEM88BA6NKF7 KLK11-210ENST00000600362 759 ntTSL 3 BASIC18.48■□□□□ 0.55
TMEM88BA6NKF7 AC100757.4-201ENST00000626934 759 ntBASIC18.48■□□□□ 0.55
TMEM88BA6NKF7 GPS1-226ENST00000623691 1839 ntAPPRIS ALT1 TSL 5 BASIC18.48■□□□□ 0.55
TMEM88BA6NKF7 QSOX2-201ENST00000358701 4530 ntAPPRIS P1 TSL 2 BASIC18.48■□□□□ 0.55
TMEM88BA6NKF7 KRT15-203ENST00000393976 2394 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
TMEM88BA6NKF7 CHRDL1-205ENST00000482160 1537 ntTSL 2 BASIC18.48■□□□□ 0.55
TMEM88BA6NKF7 BLOC1S3-201ENST00000433642 2601 ntAPPRIS P1 TSL 2 BASIC18.48■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 52 ms