Protein–RNA interactions for Protein: A6NGN4

PRAMEF25, PRAME family member 25, humanhuman

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEF25A6NGN4 GDF6-201ENST00000287020 3701 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
PRAMEF25A6NGN4 PARVB-204ENST00000406477 1569 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
PRAMEF25A6NGN4 LINC01118-203ENST00000479311 1588 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
PRAMEF25A6NGN4 CNOT10-202ENST00000331889 2573 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
PRAMEF25A6NGN4 MAPK3-212ENST00000484663 2567 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
PRAMEF25A6NGN4 BCL2L12-202ENST00000246785 1431 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
PRAMEF25A6NGN4 PRR30-202ENST00000432962 1440 ntAPPRIS ALT2 TSL 3 BASIC15.21■□□□□ 0.03
PRAMEF25A6NGN4 AC010619.2-201ENST00000595815 1421 ntTSL 2 BASIC15.21■□□□□ 0.03
PRAMEF25A6NGN4 TRAPPC1-201ENST00000303731 811 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
PRAMEF25A6NGN4 DPM2-202ENST00000373110 738 ntTSL 2 BASIC15.21■□□□□ 0.03
PRAMEF25A6NGN4 SSH3-203ENST00000376757 2990 ntTSL 2 BASIC15.21■□□□□ 0.03
PRAMEF25A6NGN4 PARK7-203ENST00000377491 977 ntAPPRIS P1 TSL 3 BASIC15.21■□□□□ 0.03
PRAMEF25A6NGN4 CBX7-202ENST00000401405 784 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
PRAMEF25A6NGN4 MRPS12-203ENST00000407800 1220 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
PRAMEF25A6NGN4 ADH5P3-201ENST00000433842 1137 ntBASIC15.21■□□□□ 0.03
PRAMEF25A6NGN4 DARS-AS1-203ENST00000438432 768 ntTSL 3 BASIC15.21■□□□□ 0.03
PRAMEF25A6NGN4 AC004967.1-201ENST00000453589 447 ntBASIC15.21■□□□□ 0.03
PRAMEF25A6NGN4 AL390729.1-201ENST00000456651 587 ntTSL 2 BASIC15.21■□□□□ 0.03
PRAMEF25A6NGN4 USP30-AS1-201ENST00000478808 656 ntTSL 2 BASIC15.21■□□□□ 0.03
PRAMEF25A6NGN4 RN7SL589P-201ENST00000481268 310 ntBASIC15.21■□□□□ 0.03
PRAMEF25A6NGN4 FAM153C-206ENST00000507848 1071 ntAPPRIS ALT2 TSL 2 BASIC15.21■□□□□ 0.03
PRAMEF25A6NGN4 UBXN1-210ENST00000529640 1110 ntAPPRIS ALT1 TSL 5 BASIC15.21■□□□□ 0.03
PRAMEF25A6NGN4 GMDS-AS1-205ENST00000529893 900 ntTSL 5 BASIC15.21■□□□□ 0.03
PRAMEF25A6NGN4 TMEM258-204ENST00000537328 575 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
PRAMEF25A6NGN4 AC133550.1-201ENST00000563565 295 ntTSL 3 BASIC15.21■□□□□ 0.03
PRAMEF25A6NGN4 AC009630.3-201ENST00000581909 729 ntTSL 5 BASIC15.21■□□□□ 0.03
PRAMEF25A6NGN4 AC020765.3-201ENST00000613051 740 ntBASIC15.21■□□□□ 0.03
PRAMEF25A6NGN4 IRF1-211ENST00000613424 821 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
PRAMEF25A6NGN4 KDM5C-202ENST00000375379 5245 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
PRAMEF25A6NGN4 AQP3-201ENST00000297991 1849 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
PRAMEF25A6NGN4 MAST3-201ENST00000262811 5896 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
PRAMEF25A6NGN4 ERP29-203ENST00000546477 1698 ntTSL 3 BASIC15.21■□□□□ 0.03
PRAMEF25A6NGN4 SYT3-201ENST00000338916 2915 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
PRAMEF25A6NGN4 MARVELD3-204ENST00000565261 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.02
PRAMEF25A6NGN4 AK5-203ENST00000354567 3251 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
PRAMEF25A6NGN4 SLC43A2-204ENST00000571650 3261 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
PRAMEF25A6NGN4 EFR3B-203ENST00000402191 3685 ntTSL 5 BASIC15.21■□□□□ 0.02
PRAMEF25A6NGN4 PAPD5-202ENST00000436909 4635 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.02
PRAMEF25A6NGN4 ARL15-201ENST00000502271 3248 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
PRAMEF25A6NGN4 CRAMP1-202ENST00000397412 7772 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
PRAMEF25A6NGN4 C3orf67-201ENST00000295966 2650 ntTSL 2 BASIC15.2■□□□□ 0.02
PRAMEF25A6NGN4 MC1R-202ENST00000555147 3099 ntAPPRIS P1 BASIC15.2■□□□□ 0.02
PRAMEF25A6NGN4 APBA2-205ENST00000558330 3349 ntTSL 2 BASIC15.2■□□□□ 0.02
PRAMEF25A6NGN4 AKAP8P1-201ENST00000434743 1349 ntBASIC15.2■□□□□ 0.02
PRAMEF25A6NGN4 HEY1-208ENST00000523976 1325 ntTSL 2 BASIC15.2■□□□□ 0.02
PRAMEF25A6NGN4 ISLR-201ENST00000249842 2371 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
PRAMEF25A6NGN4 PABPC4-202ENST00000372857 3048 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
PRAMEF25A6NGN4 MTDH-201ENST00000336273 6177 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
PRAMEF25A6NGN4 SCRIB-202ENST00000356994 5218 ntAPPRIS P4 TSL 2 BASIC15.2■□□□□ 0.02
PRAMEF25A6NGN4 PTPN5-201ENST00000358540 3135 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
PRAMEF25A6NGN4 MMP15-201ENST00000219271 4250 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
PRAMEF25A6NGN4 COQ10A-202ENST00000433805 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
PRAMEF25A6NGN4 TUBB8-201ENST00000561967 1413 ntTSL 5 BASIC15.2■□□□□ 0.02
PRAMEF25A6NGN4 CDH1-202ENST00000422392 2567 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
PRAMEF25A6NGN4 ULK4-203ENST00000420927 1904 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
PRAMEF25A6NGN4 ITGA3-202ENST00000320031 4888 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
PRAMEF25A6NGN4 PDZRN3-201ENST00000263666 4248 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
PRAMEF25A6NGN4 RAMP1-201ENST00000254661 910 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
PRAMEF25A6NGN4 CRYBA2-201ENST00000295728 893 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
PRAMEF25A6NGN4 TIMM8BP1-201ENST00000452384 211 ntBASIC15.2■□□□□ 0.02
PRAMEF25A6NGN4 LINC01640-201ENST00000452505 550 ntTSL 4 BASIC15.2■□□□□ 0.02
PRAMEF25A6NGN4 KRT18P34-201ENST00000488218 1270 ntBASIC15.2■□□□□ 0.02
PRAMEF25A6NGN4 PMF1-BGLAP-203ENST00000490491 1007 ntAPPRIS P1 TSL 2 BASIC15.2■□□□□ 0.02
PRAMEF25A6NGN4 CCND1-203ENST00000536559 553 ntTSL 3 BASIC15.2■□□□□ 0.02
PRAMEF25A6NGN4 LHX5-AS1-201ENST00000551357 522 ntTSL 2 BASIC15.2■□□□□ 0.02
PRAMEF25A6NGN4 AL135744.1-201ENST00000565098 629 ntBASIC15.2■□□□□ 0.02
PRAMEF25A6NGN4 FLYWCH2-203ENST00000572006 754 ntAPPRIS ALT2 TSL 2 BASIC15.2■□□□□ 0.02
PRAMEF25A6NGN4 TMEM97-205ENST00000583381 578 ntTSL 4 BASIC15.2■□□□□ 0.02
PRAMEF25A6NGN4 IGFLR1-205ENST00000588992 730 ntAPPRIS ALT2 TSL 2 BASIC15.2■□□□□ 0.02
PRAMEF25A6NGN4 SLC9A3-AS1-205ENST00000606319 477 ntTSL 3 BASIC15.2■□□□□ 0.02
PRAMEF25A6NGN4 TBX18-206ENST00000606784 1230 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
PRAMEF25A6NGN4 TVP23A-210ENST00000612195 1298 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
PRAMEF25A6NGN4 LINC00623-201ENST00000613486 486 ntTSL 5 BASIC15.2■□□□□ 0.02
PRAMEF25A6NGN4 MEAF6-201ENST00000296214 1525 ntAPPRIS ALT1 TSL 1 (best) BASIC15.2■□□□□ 0.02
PRAMEF25A6NGN4 HAUS3-204ENST00000506763 3166 ntTSL 2 BASIC15.2■□□□□ 0.02
PRAMEF25A6NGN4 TRPV4-204ENST00000536838 2514 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
PRAMEF25A6NGN4 MAGI1-213ENST00000483466 4791 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
PRAMEF25A6NGN4 AHCY-201ENST00000217426 2143 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
PRAMEF25A6NGN4 EVC2-202ENST00000344408 4390 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
PRAMEF25A6NGN4 SLC39A1-203ENST00000368621 2398 ntAPPRIS P1 TSL 2 BASIC15.2■□□□□ 0.02
PRAMEF25A6NGN4 TSPEAR-202ENST00000397916 2114 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
PRAMEF25A6NGN4 KCMF1-201ENST00000409785 7568 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
PRAMEF25A6NGN4 UBA5-213ENST00000494238 2997 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
PRAMEF25A6NGN4 AC023824.1-201ENST00000562945 2975 ntBASIC15.2■□□□□ 0.02
PRAMEF25A6NGN4 NTNG1-202ENST00000370065 1485 ntTSL 5 BASIC15.2■□□□□ 0.02
PRAMEF25A6NGN4 PPM1D-201ENST00000305921 4778 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
PRAMEF25A6NGN4 DYNC1LI1-204ENST00000432458 1827 ntTSL 2 BASIC15.2■□□□□ 0.02
PRAMEF25A6NGN4 AC053503.2-201ENST00000420563 1598 ntTSL 2 BASIC15.19■□□□□ 0.02
PRAMEF25A6NGN4 CCDC90B-202ENST00000455220 1550 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
PRAMEF25A6NGN4 SNX6-202ENST00000396526 3398 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
PRAMEF25A6NGN4 TK2-203ENST00000451102 3738 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
PRAMEF25A6NGN4 LINC01270-201ENST00000371639 2281 ntTSL 2 BASIC15.19■□□□□ 0.02
PRAMEF25A6NGN4 SLC6A2-204ENST00000561820 2268 ntTSL 5 BASIC15.19■□□□□ 0.02
PRAMEF25A6NGN4 CCNA1-203ENST00000625767 1699 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
PRAMEF25A6NGN4 AC100803.3-201ENST00000606664 2961 ntTSL 5 BASIC15.19■□□□□ 0.02
PRAMEF25A6NGN4 ARL8B-208ENST00000611208 2981 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
PRAMEF25A6NGN4 PPT1-215ENST00000641471 2368 ntBASIC15.19■□□□□ 0.02
PRAMEF25A6NGN4 PPM1J-202ENST00000464951 2474 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
PRAMEF25A6NGN4 MDFIC-201ENST00000257724 4598 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
PRAMEF25A6NGN4 F10-202ENST00000375559 1517 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 255.3 ms