Protein–RNA interactions for Protein: A6NER0

TBC1D3F, TBC1 domain family member 3F, humanhuman

Predicted RBP Predictions only

Length 549 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TBC1D3FA6NER0 AC004461.2-201ENST00000629517 803 ntBASIC16.1■□□□□ 0.17
TBC1D3FA6NER0 HS3ST3B1-201ENST00000360954 5367 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
TBC1D3FA6NER0 AL391825.1-201ENST00000457671 1364 ntBASIC16.1■□□□□ 0.17
TBC1D3FA6NER0 RARA-206ENST00000425707 3041 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
TBC1D3FA6NER0 SLCO5A1-206ENST00000530307 2630 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
TBC1D3FA6NER0 ANXA4-202ENST00000409920 1414 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
TBC1D3FA6NER0 MAP3K9-201ENST00000381250 4025 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
TBC1D3FA6NER0 PRDM8-201ENST00000339711 4095 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
TBC1D3FA6NER0 RCAN3-210ENST00000618490 2386 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
TBC1D3FA6NER0 TEKT2-201ENST00000207457 1509 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
TBC1D3FA6NER0 ZNF408-201ENST00000311764 2442 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
TBC1D3FA6NER0 NCAPH2-205ENST00000420993 2037 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
TBC1D3FA6NER0 DPY19L2P4-202ENST00000497063 2018 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
TBC1D3FA6NER0 CYP4F24P-201ENST00000586049 1580 ntBASIC16.09■□□□□ 0.17
TBC1D3FA6NER0 BFSP1-205ENST00000536626 2075 ntTSL 2 BASIC16.09■□□□□ 0.17
TBC1D3FA6NER0 CDS1-201ENST00000295887 4461 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
TBC1D3FA6NER0 PRCC-201ENST00000271526 2105 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
TBC1D3FA6NER0 NEK2-202ENST00000366999 2131 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
TBC1D3FA6NER0 PDE4DIP-230ENST00000530472 1690 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
TBC1D3FA6NER0 NRIP1-203ENST00000400202 7671 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
TBC1D3FA6NER0 CAPRIN1-207ENST00000529307 2266 ntAPPRIS ALT2 TSL 2 BASIC16.09■□□□□ 0.17
TBC1D3FA6NER0 TSPO-202ENST00000337554 881 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
TBC1D3FA6NER0 EFNA4-201ENST00000359751 1096 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
TBC1D3FA6NER0 CYB561D1-202ENST00000369868 1085 ntTSL 2 BASIC16.09■□□□□ 0.17
TBC1D3FA6NER0 ADIRF-201ENST00000372013 917 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
TBC1D3FA6NER0 WDR45-208ENST00000396681 1146 ntTSL 5 BASIC16.09■□□□□ 0.17
TBC1D3FA6NER0 PTPA-220ENST00000436883 532 ntTSL 4 BASIC16.09■□□□□ 0.17
TBC1D3FA6NER0 KRT17P7-201ENST00000451704 1104 ntBASIC16.09■□□□□ 0.17
TBC1D3FA6NER0 AC093004.1-201ENST00000508850 424 ntBASIC16.09■□□□□ 0.17
TBC1D3FA6NER0 SPDYE18-201ENST00000510091 1050 ntBASIC16.09■□□□□ 0.17
TBC1D3FA6NER0 PUDP-206ENST00000540122 825 ntTSL 2 BASIC16.09■□□□□ 0.17
TBC1D3FA6NER0 IL32-234ENST00000552936 713 ntAPPRIS ALT2 TSL 3 BASIC16.09■□□□□ 0.17
TBC1D3FA6NER0 MRPS23-202ENST00000578444 580 ntTSL 2 BASIC16.09■□□□□ 0.17
TBC1D3FA6NER0 ALDH3B1-203ENST00000612297 1231 ntTSL 3 BASIC16.09■□□□□ 0.17
TBC1D3FA6NER0 AC105760.2-201ENST00000418430 2341 ntTSL 2 BASIC16.09■□□□□ 0.17
TBC1D3FA6NER0 LINC01301-205ENST00000531654 1347 ntTSL 5 BASIC16.09■□□□□ 0.17
TBC1D3FA6NER0 AC009292.1-201ENST00000502156 1986 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
TBC1D3FA6NER0 HFE2-205ENST00000497365 1419 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
TBC1D3FA6NER0 LMF1-AS1-202ENST00000569574 1408 ntTSL 3 BASIC16.09■□□□□ 0.17
TBC1D3FA6NER0 NKAIN1-201ENST00000373736 2589 ntAPPRIS P1 TSL 2 BASIC16.09■□□□□ 0.17
TBC1D3FA6NER0 NR2E3-204ENST00000621736 2032 ntTSL 2 BASIC16.09■□□□□ 0.17
TBC1D3FA6NER0 PIMREG-201ENST00000250056 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
TBC1D3FA6NER0 ATP4B-201ENST00000335288 1488 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
TBC1D3FA6NER0 LINC01569-202ENST00000573042 2093 ntTSL 2 BASIC16.09■□□□□ 0.17
TBC1D3FA6NER0 ORMDL3-201ENST00000304046 2111 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
TBC1D3FA6NER0 TADA1-201ENST00000367874 2159 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
TBC1D3FA6NER0 PCM1-206ENST00000518537 2171 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
TBC1D3FA6NER0 STAC3-206ENST00000554578 1580 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
TBC1D3FA6NER0 SLC47A1-209ENST00000575023 2224 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
TBC1D3FA6NER0 DLGAP4-205ENST00000401952 4881 ntAPPRIS P4 TSL 5 BASIC16.08■□□□□ 0.17
TBC1D3FA6NER0 UQCC3-202ENST00000531323 2288 ntAPPRIS P1 TSL 3 BASIC16.08■□□□□ 0.17
TBC1D3FA6NER0 RIC8B-213ENST00000638198 1611 ntTSL 5 BASIC16.08■□□□□ 0.17
TBC1D3FA6NER0 ACOT9-201ENST00000336430 1675 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.17
TBC1D3FA6NER0 PHF23-202ENST00000454255 1662 ntTSL 2 BASIC16.08■□□□□ 0.17
TBC1D3FA6NER0 PGRMC2-208ENST00000613358 3783 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
TBC1D3FA6NER0 VIPR1-204ENST00000438259 2427 ntTSL 2 BASIC16.08■□□□□ 0.17
TBC1D3FA6NER0 AL591845.1-201ENST00000373137 1838 ntTSL 2 BASIC16.08■□□□□ 0.17
TBC1D3FA6NER0 CD1E-213ENST00000444681 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.17
TBC1D3FA6NER0 NF2-208ENST00000403435 2568 ntTSL 5 BASIC16.08■□□□□ 0.17
TBC1D3FA6NER0 RBCK1-202ENST00000356286 2774 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
TBC1D3FA6NER0 PFKP-202ENST00000381075 2769 ntTSL 2 BASIC16.08■□□□□ 0.16
TBC1D3FA6NER0 ACBD3-201ENST00000366812 3573 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
TBC1D3FA6NER0 FUT3-202ENST00000458379 2024 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
TBC1D3FA6NER0 SFRP1-201ENST00000220772 4492 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
TBC1D3FA6NER0 TMEM52-201ENST00000310991 929 ntAPPRIS P2 TSL 1 (best) BASIC16.08■□□□□ 0.16
TBC1D3FA6NER0 TOMM5-201ENST00000321301 751 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
TBC1D3FA6NER0 COX5BP8-201ENST00000416911 349 ntBASIC16.08■□□□□ 0.16
TBC1D3FA6NER0 DNAJB6-209ENST00000443280 1159 ntTSL 2 BASIC16.08■□□□□ 0.16
TBC1D3FA6NER0 HEBP2-202ENST00000448741 661 ntTSL 5 BASIC16.08■□□□□ 0.16
TBC1D3FA6NER0 AC091729.1-201ENST00000449721 869 ntTSL 3 BASIC16.08■□□□□ 0.16
TBC1D3FA6NER0 AC226118.1-201ENST00000515213 2146 ntTSL 2 BASIC16.08■□□□□ 0.16
TBC1D3FA6NER0 CNOT8-210ENST00000519404 945 ntTSL 2 BASIC16.08■□□□□ 0.16
TBC1D3FA6NER0 CNOT8-214ENST00000520671 923 ntTSL 2 BASIC16.08■□□□□ 0.16
TBC1D3FA6NER0 CNOT8-218ENST00000521583 1151 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
TBC1D3FA6NER0 AP001107.3-201ENST00000534065 544 ntTSL 4 BASIC16.08■□□□□ 0.16
TBC1D3FA6NER0 CD4-210ENST00000541982 1187 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
TBC1D3FA6NER0 AL157392.3-207ENST00000601758 744 ntTSL 5 BASIC16.08■□□□□ 0.16
TBC1D3FA6NER0 SRD5A3P1-201ENST00000603021 949 ntBASIC16.08■□□□□ 0.16
TBC1D3FA6NER0 FAM135A-205ENST00000418814 6415 ntTSL 5 BASIC16.08■□□□□ 0.16
TBC1D3FA6NER0 AHRR-203ENST00000505113 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
TBC1D3FA6NER0 FKBPL-201ENST00000375156 1345 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
TBC1D3FA6NER0 CU639417.3-201ENST00000624240 1404 ntBASIC16.08■□□□□ 0.16
TBC1D3FA6NER0 SIGLEC7-201ENST00000305628 1469 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
TBC1D3FA6NER0 VASH1-203ENST00000554237 1462 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
TBC1D3FA6NER0 RBFOX3-212ENST00000584778 1547 ntAPPRIS ALT2 TSL 5 BASIC16.08■□□□□ 0.16
TBC1D3FA6NER0 AC012414.7-201ENST00000621235 1507 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
TBC1D3FA6NER0 PCDHA12-202ENST00000613593 2588 ntBASIC16.08■□□□□ 0.16
TBC1D3FA6NER0 CLN3-201ENST00000333496 1608 ntTSL 5 BASIC16.08■□□□□ 0.16
TBC1D3FA6NER0 GAS7-203ENST00000432992 4970 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
TBC1D3FA6NER0 UBL7-209ENST00000567435 1720 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
TBC1D3FA6NER0 KLHDC8A-205ENST00000539253 2931 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.16
TBC1D3FA6NER0 MAGEA8-201ENST00000286482 1778 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
TBC1D3FA6NER0 SAP130-203ENST00000357702 4173 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
TBC1D3FA6NER0 WBP2-204ENST00000585462 1895 ntTSL 3 BASIC16.08■□□□□ 0.16
TBC1D3FA6NER0 SEMA5B-211ENST00000616742 4933 ntAPPRIS P3 TSL 5 BASIC16.07■□□□□ 0.16
TBC1D3FA6NER0 GSKIP-201ENST00000438650 2140 ntAPPRIS P1 TSL 2 BASIC16.07■□□□□ 0.16
TBC1D3FA6NER0 N4BP1-201ENST00000262384 7106 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
TBC1D3FA6NER0 AC009053.2-201ENST00000563701 2365 ntBASIC16.07■□□□□ 0.16
TBC1D3FA6NER0 HNRNPUL2-BSCL2-201ENST00000403734 4001 ntAPPRIS P1 TSL 2 BASIC16.07■□□□□ 0.16
TBC1D3FA6NER0 UBE2R2-201ENST00000263228 4075 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 42.2 ms