Protein–RNA interactions for Protein: S4R434

TMEM56-RWDD3, TMEM56-RWDD3 readthrough, humanhuman

Predictions only

Length 201 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM56-RWDD3S4R434 DACT3-201ENST00000300875 2526 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
TMEM56-RWDD3S4R434 CASP9-201ENST00000333868 2019 ntAPPRIS P2 TSL 1 (best) BASIC19.3■□□□□ 0.68
TMEM56-RWDD3S4R434 RARA-204ENST00000394089 2024 ntAPPRIS P1 TSL 2 BASIC19.3■□□□□ 0.68
TMEM56-RWDD3S4R434 BIN1-207ENST00000357970 2497 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
TMEM56-RWDD3S4R434 PDS5A-202ENST00000503396 2685 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
TMEM56-RWDD3S4R434 TANGO2-204ENST00000401833 1920 ntTSL 5 BASIC19.29■□□□□ 0.68
TMEM56-RWDD3S4R434 LSM14B-204ENST00000370915 1079 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
TMEM56-RWDD3S4R434 MAL2-204ENST00000614891 2818 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
TMEM56-RWDD3S4R434 HMCES-204ENST00000502878 1952 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
TMEM56-RWDD3S4R434 ANO8-204ENST00000630631 1905 ntTSL 5 BASIC19.29■□□□□ 0.68
TMEM56-RWDD3S4R434 TRIM14-203ENST00000375098 1792 ntAPPRIS P1 TSL 2 BASIC19.29■□□□□ 0.68
TMEM56-RWDD3S4R434 CDH23-206ENST00000398842 1759 ntTSL 5 BASIC19.29■□□□□ 0.68
TMEM56-RWDD3S4R434 BDH1-207ENST00000441275 1605 ntTSL 5 BASIC19.29■□□□□ 0.68
TMEM56-RWDD3S4R434 PITX2-209ENST00000557119 1889 ntTSL 2 BASIC19.28■□□□□ 0.68
TMEM56-RWDD3S4R434 ZFAND4-205ENST00000374371 2283 ntTSL 5 BASIC19.28■□□□□ 0.68
TMEM56-RWDD3S4R434 SRXN1-201ENST00000381962 2698 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
TMEM56-RWDD3S4R434 HYAL2-207ENST00000442581 2318 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
TMEM56-RWDD3S4R434 PTH1R-206ENST00000430002 1947 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
TMEM56-RWDD3S4R434 RNF223-201ENST00000453464 1902 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
TMEM56-RWDD3S4R434 MIR6089-201ENST00000616698 64 ntBASIC19.28■□□□□ 0.68
TMEM56-RWDD3S4R434 HOXC9-201ENST00000303450 1516 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
TMEM56-RWDD3S4R434 BTBD7-205ENST00000554565 2697 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
TMEM56-RWDD3S4R434 DAZAP1-201ENST00000233078 2160 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.68
TMEM56-RWDD3S4R434 AC079834.2-201ENST00000609776 1949 ntBASIC19.27■□□□□ 0.68
TMEM56-RWDD3S4R434 KCNS1-202ENST00000537075 2136 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
TMEM56-RWDD3S4R434 HOMER2-201ENST00000304231 1990 ntAPPRIS P4 TSL 5 BASIC19.27■□□□□ 0.68
TMEM56-RWDD3S4R434 GNB2-203ENST00000393926 1641 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.68
TMEM56-RWDD3S4R434 CTXN1-201ENST00000318978 1274 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
TMEM56-RWDD3S4R434 AC126177.7-201ENST00000547904 679 ntBASIC19.27■□□□□ 0.68
TMEM56-RWDD3S4R434 KCNC3-201ENST00000376959 5447 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
TMEM56-RWDD3S4R434 ARMC6-201ENST00000269932 2412 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
TMEM56-RWDD3S4R434 FBXW4-201ENST00000331272 2483 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
TMEM56-RWDD3S4R434 ADSS-201ENST00000366535 2780 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
TMEM56-RWDD3S4R434 RANBP1-202ENST00000402752 1132 ntAPPRIS ALT1 TSL 1 (best) BASIC19.26■□□□□ 0.67
TMEM56-RWDD3S4R434 HES6-205ENST00000409356 528 ntTSL 2 BASIC19.26■□□□□ 0.67
TMEM56-RWDD3S4R434 AC004540.2-201ENST00000451368 611 ntTSL 2 BASIC19.26■□□□□ 0.67
TMEM56-RWDD3S4R434 MAP4K3-211ENST00000484274 407 ntTSL 2 BASIC19.26■□□□□ 0.67
TMEM56-RWDD3S4R434 DUX4L11-201ENST00000611504 1267 ntBASIC19.26■□□□□ 0.67
TMEM56-RWDD3S4R434 DUX4L12-201ENST00000614593 1267 ntBASIC19.26■□□□□ 0.67
TMEM56-RWDD3S4R434 DUX4L14-201ENST00000621227 1267 ntBASIC19.26■□□□□ 0.67
TMEM56-RWDD3S4R434 AC092902.2-221ENST00000628476 965 ntTSL 5 BASIC19.26■□□□□ 0.67
TMEM56-RWDD3S4R434 S1PR4-201ENST00000246115 1565 ntAPPRIS P1 BASIC19.26■□□□□ 0.67
TMEM56-RWDD3S4R434 PRMT5-213ENST00000553897 1857 ntTSL 2 BASIC19.26■□□□□ 0.67
TMEM56-RWDD3S4R434 C11orf95-202ENST00000433688 5716 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
TMEM56-RWDD3S4R434 DGAT2-201ENST00000228027 2453 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
TMEM56-RWDD3S4R434 ABHD6-205ENST00000478253 2482 ntAPPRIS P1 TSL 2 BASIC19.26■□□□□ 0.67
TMEM56-RWDD3S4R434 LSR-205ENST00000427250 1606 ntTSL 2 BASIC19.25■□□□□ 0.67
TMEM56-RWDD3S4R434 REPIN1-204ENST00000466559 1022 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
TMEM56-RWDD3S4R434 DVL3-201ENST00000313143 5254 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
TMEM56-RWDD3S4R434 RAX-201ENST00000256852 2935 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
TMEM56-RWDD3S4R434 AC099805.1-201ENST00000523987 1797 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
TMEM56-RWDD3S4R434 AMZ2-202ENST00000359904 2402 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
TMEM56-RWDD3S4R434 ZFP91-CNTF-201ENST00000389919 2319 ntAPPRIS P5 TSL 2 BASIC19.24■□□□□ 0.67
TMEM56-RWDD3S4R434 CEBPB-AS1-201ENST00000613921 2648 ntTSL 3 BASIC19.24■□□□□ 0.67
TMEM56-RWDD3S4R434 DTNB-201ENST00000288642 2464 ntAPPRIS ALT2 TSL 2 BASIC19.24■□□□□ 0.67
TMEM56-RWDD3S4R434 DTNB-208ENST00000406818 2474 ntAPPRIS P4 TSL 1 (best) BASIC19.24■□□□□ 0.67
TMEM56-RWDD3S4R434 NKX6-3-202ENST00000524115 1683 ntTSL 2 BASIC19.24■□□□□ 0.67
TMEM56-RWDD3S4R434 SLC39A4-202ENST00000301305 2174 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
TMEM56-RWDD3S4R434 PLEKHO1-202ENST00000369126 1809 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
TMEM56-RWDD3S4R434 PTPRM-201ENST00000332175 6095 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
TMEM56-RWDD3S4R434 ZNF76-203ENST00000373953 2716 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
TMEM56-RWDD3S4R434 PSPH-201ENST00000275605 2131 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
TMEM56-RWDD3S4R434 ARHGEF7-AS2-201ENST00000425094 1239 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
TMEM56-RWDD3S4R434 PTH1R-207ENST00000449590 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
TMEM56-RWDD3S4R434 C16orf74-204ENST00000602719 1002 ntAPPRIS ALT2 TSL 3 BASIC19.23■□□□□ 0.67
TMEM56-RWDD3S4R434 PVT1-212ENST00000521951 1535 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
TMEM56-RWDD3S4R434 TRIM28-202ENST00000341753 2709 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
TMEM56-RWDD3S4R434 LRRC73-201ENST00000372441 2121 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
TMEM56-RWDD3S4R434 NPHS2-202ENST00000367616 1670 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
TMEM56-RWDD3S4R434 PABPC1L2B-AS1-201ENST00000416989 1167 ntTSL 3 BASIC19.22■□□□□ 0.67
TMEM56-RWDD3S4R434 AL662864.1-201ENST00000454388 1167 ntTSL 3 BASIC19.22■□□□□ 0.67
TMEM56-RWDD3S4R434 KCTD15-206ENST00000588881 1211 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
TMEM56-RWDD3S4R434 SLC9A3-203ENST00000514375 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
TMEM56-RWDD3S4R434 KLC1-201ENST00000246489 2294 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
TMEM56-RWDD3S4R434 KLC1-224ENST00000557450 2265 ntTSL 5 BASIC19.22■□□□□ 0.67
TMEM56-RWDD3S4R434 SHD-204ENST00000599689 1729 ntTSL 5 BASIC19.22■□□□□ 0.67
TMEM56-RWDD3S4R434 ST3GAL5-214ENST00000638178 2034 ntTSL 5 BASIC19.22■□□□□ 0.67
TMEM56-RWDD3S4R434 PQLC3-204ENST00000441908 1784 ntTSL 2 BASIC19.21■□□□□ 0.67
TMEM56-RWDD3S4R434 GRAMD1A-201ENST00000317991 2695 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
TMEM56-RWDD3S4R434 MAGI2-217ENST00000629359 6704 ntTSL 5 BASIC19.21■□□□□ 0.67
TMEM56-RWDD3S4R434 FAM86JP-203ENST00000485843 2012 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
TMEM56-RWDD3S4R434 NAPRT-204ENST00000449291 1965 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
TMEM56-RWDD3S4R434 FAM107B-211ENST00000468747 2633 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.66
TMEM56-RWDD3S4R434 ABCB10P4-201ENST00000566803 2184 ntBASIC19.2■□□□□ 0.66
TMEM56-RWDD3S4R434 POTEF-201ENST00000361163 1586 ntTSL 5 BASIC19.2■□□□□ 0.66
TMEM56-RWDD3S4R434 AMZ2P1-201ENST00000397713 2259 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
TMEM56-RWDD3S4R434 NPHP3-202ENST00000383282 782 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
TMEM56-RWDD3S4R434 RFC2-201ENST00000055077 1695 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
TMEM56-RWDD3S4R434 AC078883.1-202ENST00000450443 1397 ntTSL 3 BASIC19.19■□□□□ 0.66
TMEM56-RWDD3S4R434 ZNF444-211ENST00000592949 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
TMEM56-RWDD3S4R434 AURKAIP1-203ENST00000338370 1072 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
TMEM56-RWDD3S4R434 C16orf87-201ENST00000285697 1585 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
TMEM56-RWDD3S4R434 ARFIP2-202ENST00000396777 1868 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
TMEM56-RWDD3S4R434 TMEM51-205ENST00000434578 1861 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
TMEM56-RWDD3S4R434 IL15RA-214ENST00000525219 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
TMEM56-RWDD3S4R434 MAP6D1-201ENST00000318631 2111 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
TMEM56-RWDD3S4R434 PDE10A-205ENST00000616273 2118 ntTSL 2 BASIC19.18■□□□□ 0.66
TMEM56-RWDD3S4R434 PDF-201ENST00000288022 1158 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
TMEM56-RWDD3S4R434 ING2-201ENST00000302327 1189 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
TMEM56-RWDD3S4R434 DOHH-201ENST00000427575 2031 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 21 ms