Protein–RNA interactions for Protein: Q9Y5S2

CDC42BPB, Serine/threonine-protein kinase MRCK beta, humanhuman

Predictions only

Length 1,711 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPBQ9Y5S2 UCK1-204ENST00000372215 2167 ntAPPRIS P1 TSL 1 (best) BASIC36.41■■■■□ 3.42
CDC42BPBQ9Y5S2 BSCL2-205ENST00000403550 1693 ntAPPRIS P3 TSL 5 BASIC36.4■■■■□ 3.42
CDC42BPBQ9Y5S2 SURF2-201ENST00000371964 842 ntAPPRIS P1 TSL 1 (best) BASIC36.39■■■■□ 3.42
CDC42BPBQ9Y5S2 AC092807.3-205ENST00000467666 531 ntTSL 3 BASIC36.39■■■■□ 3.42
CDC42BPBQ9Y5S2 AMH-201ENST00000221496 1821 ntAPPRIS P1 TSL 1 (best) BASIC36.39■■■■□ 3.42
CDC42BPBQ9Y5S2 TSPAN4-203ENST00000397397 1423 ntAPPRIS P1 TSL 1 (best) BASIC36.39■■■■□ 3.42
CDC42BPBQ9Y5S2 CASP9-202ENST00000348549 1621 ntTSL 1 (best) BASIC36.39■■■■□ 3.42
CDC42BPBQ9Y5S2 KRAS-204ENST00000557334 1052 ntTSL 5 BASIC36.39■■■■□ 3.42
CDC42BPBQ9Y5S2 ZNRF1-205ENST00000566250 1069 ntTSL 1 (best) BASIC36.39■■■■□ 3.42
CDC42BPBQ9Y5S2 ZNRF1-206ENST00000567962 1234 ntAPPRIS P1 TSL 1 (best) BASIC36.39■■■■□ 3.42
CDC42BPBQ9Y5S2 CBR3-201ENST00000290354 1169 ntAPPRIS P1 TSL 1 (best) BASIC36.38■■■■□ 3.41
CDC42BPBQ9Y5S2 AC119427.1-201ENST00000633182 556 ntTSL 4 BASIC36.38■■■■□ 3.41
CDC42BPBQ9Y5S2 CA9-204ENST00000617161 1374 ntTSL 1 (best) BASIC36.38■■■■□ 3.41
CDC42BPBQ9Y5S2 R3HCC1-201ENST00000265806 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC36.38■■■■□ 3.41
CDC42BPBQ9Y5S2 PAOX-203ENST00000357296 1633 ntTSL 1 (best) BASIC36.37■■■■□ 3.41
CDC42BPBQ9Y5S2 TMUB1-202ENST00000392818 1563 ntAPPRIS P1 TSL 1 (best) BASIC36.37■■■■□ 3.41
CDC42BPBQ9Y5S2 AK3-203ENST00000447596 705 ntTSL 2 BASIC36.37■■■■□ 3.41
CDC42BPBQ9Y5S2 AL356740.2-201ENST00000601559 647 ntBASIC36.37■■■■□ 3.41
CDC42BPBQ9Y5S2 MNX1-201ENST00000252971 2174 ntAPPRIS P3 TSL 1 (best) BASIC36.37■■■■□ 3.41
CDC42BPBQ9Y5S2 ACAA1-220ENST00000627515 1862 ntTSL 5 BASIC36.37■■■■□ 3.41
CDC42BPBQ9Y5S2 PLEKHO1-202ENST00000369126 1809 ntTSL 1 (best) BASIC36.37■■■■□ 3.41
CDC42BPBQ9Y5S2 DHRS11-215ENST00000618403 1598 ntAPPRIS P1 TSL 1 (best) BASIC36.37■■■■□ 3.41
CDC42BPBQ9Y5S2 FGF22-201ENST00000215530 1311 ntAPPRIS P1 TSL 1 (best) BASIC36.37■■■■□ 3.41
CDC42BPBQ9Y5S2 TFPT-201ENST00000391757 774 ntTSL 5 BASIC36.37■■■■□ 3.41
CDC42BPBQ9Y5S2 TFPT-202ENST00000391758 804 ntAPPRIS ALT2 TSL 1 (best) BASIC36.37■■■■□ 3.41
CDC42BPBQ9Y5S2 CLTA-204ENST00000433436 1235 ntAPPRIS ALT1 TSL 1 (best) BASIC36.37■■■■□ 3.41
CDC42BPBQ9Y5S2 CLTA-209ENST00000538225 1181 ntTSL 2 BASIC36.37■■■■□ 3.41
CDC42BPBQ9Y5S2 CLTA-210ENST00000540080 989 ntTSL 2 BASIC36.37■■■■□ 3.41
CDC42BPBQ9Y5S2 BCL3-201ENST00000164227 2038 ntAPPRIS P1 TSL 1 (best) BASIC36.36■■■■□ 3.41
CDC42BPBQ9Y5S2 ZNF653-201ENST00000293771 2240 ntAPPRIS P1 TSL 1 (best) BASIC36.36■■■■□ 3.41
CDC42BPBQ9Y5S2 SH3BP2-221ENST00000511747 2351 ntAPPRIS P3 TSL 1 (best) BASIC36.36■■■■□ 3.41
CDC42BPBQ9Y5S2 NPW-201ENST00000329610 498 ntAPPRIS P2 TSL 1 (best) BASIC36.36■■■■□ 3.41
CDC42BPBQ9Y5S2 TMEM260-202ENST00000538838 1638 ntTSL 1 (best) BASIC36.36■■■■□ 3.41
CDC42BPBQ9Y5S2 MOB4-204ENST00000409360 1447 ntTSL 5 BASIC36.35■■■■□ 3.41
CDC42BPBQ9Y5S2 CCNJL-201ENST00000257536 1848 ntAPPRIS P1 TSL 2 BASIC36.35■■■■□ 3.41
CDC42BPBQ9Y5S2 HES5-201ENST00000378453 1306 ntAPPRIS P1 TSL 1 (best) BASIC36.34■■■■□ 3.41
CDC42BPBQ9Y5S2 ZNF784-202ENST00000591479 1559 ntTSL 1 (best) BASIC36.34■■■■□ 3.41
CDC42BPBQ9Y5S2 ERRFI1-204ENST00000474874 479 ntTSL 3 BASIC36.34■■■■□ 3.41
CDC42BPBQ9Y5S2 PPP1R14A-204ENST00000591291 433 ntTSL 5 BASIC36.34■■■■□ 3.41
CDC42BPBQ9Y5S2 TAZ-216ENST00000613002 1485 ntTSL 1 (best) BASIC36.34■■■■□ 3.41
CDC42BPBQ9Y5S2 COL13A1-213ENST00000520267 2276 ntAPPRIS ALT2 TSL 5 BASIC36.34■■■■□ 3.41
CDC42BPBQ9Y5S2 FHL2-203ENST00000358129 1578 ntTSL 5 BASIC36.34■■■■□ 3.41
CDC42BPBQ9Y5S2 P2RX2-202ENST00000348800 1222 ntAPPRIS ALT2 TSL 1 (best) BASIC36.34■■■■□ 3.41
CDC42BPBQ9Y5S2 P2RX2-204ENST00000351222 1140 ntTSL 1 (best) BASIC36.34■■■■□ 3.41
CDC42BPBQ9Y5S2 P2RX2-207ENST00000449132 1113 ntTSL 1 (best) BASIC36.34■■■■□ 3.41
CDC42BPBQ9Y5S2 ZNF584-205ENST00000596281 575 ntTSL 2 BASIC36.34■■■■□ 3.41
CDC42BPBQ9Y5S2 LYL1-201ENST00000264824 1490 ntAPPRIS P1 TSL 1 (best) BASIC36.33■■■■□ 3.41
CDC42BPBQ9Y5S2 KAT5-208ENST00000530446 1697 ntTSL 1 (best) BASIC36.33■■■■□ 3.41
CDC42BPBQ9Y5S2 TMEM121-202ENST00000431372 1519 ntAPPRIS P1 TSL 5 BASIC36.33■■■■□ 3.41
CDC42BPBQ9Y5S2 YTHDF1-201ENST00000370334 747 ntTSL 3 BASIC36.33■■■■□ 3.41
CDC42BPBQ9Y5S2 ACTR3B-201ENST00000256001 2216 ntAPPRIS P1 TSL 1 (best) BASIC36.32■■■■□ 3.4
CDC42BPBQ9Y5S2 SMARCD3-203ENST00000392811 2018 ntTSL 1 (best) BASIC36.32■■■■□ 3.4
CDC42BPBQ9Y5S2 LIN7B-202ENST00000391864 582 ntTSL 3 BASIC36.31■■■■□ 3.4
CDC42BPBQ9Y5S2 CLTA-206ENST00000466396 695 ntTSL 2 BASIC36.31■■■■□ 3.4
CDC42BPBQ9Y5S2 RARRES2P6-201ENST00000567333 442 ntBASIC36.31■■■■□ 3.4
CDC42BPBQ9Y5S2 MCRIP1-210ENST00000576431 577 ntTSL 5 BASIC36.31■■■■□ 3.4
CDC42BPBQ9Y5S2 TMEM80-207ENST00000608174 800 ntTSL 5 BASIC36.31■■■■□ 3.4
CDC42BPBQ9Y5S2 AC133561.4-201ENST00000566112 224 ntBASIC36.31■■■■□ 3.4
CDC42BPBQ9Y5S2 LINC00472-204ENST00000436803 667 ntTSL 5 BASIC36.3■■■■□ 3.4
CDC42BPBQ9Y5S2 AC019163.1-201ENST00000512634 610 ntTSL 2 BASIC36.3■■■■□ 3.4
CDC42BPBQ9Y5S2 TMEM203-201ENST00000343666 1557 ntAPPRIS P1 BASIC36.3■■■■□ 3.4
CDC42BPBQ9Y5S2 FSD1-204ENST00000597590 1634 ntTSL 5 BASIC36.29■■■■□ 3.4
CDC42BPBQ9Y5S2 MIR17HG-201ENST00000400282 931 ntTSL 1 (best) BASIC36.29■■■■□ 3.4
CDC42BPBQ9Y5S2 EIF3J-203ENST00000535391 925 ntTSL 2 BASIC36.29■■■■□ 3.4
CDC42BPBQ9Y5S2 TOP1MT-208ENST00000519148 1868 ntTSL 2 BASIC36.29■■■■□ 3.4
CDC42BPBQ9Y5S2 GUK1-205ENST00000366722 850 ntTSL 3 BASIC36.28■■■■□ 3.4
CDC42BPBQ9Y5S2 RALB-203ENST00000420510 1252 ntAPPRIS P1 TSL 2 BASIC36.28■■■■□ 3.4
CDC42BPBQ9Y5S2 ZNRF2P3-201ENST00000424200 374 ntBASIC36.28■■■■□ 3.4
CDC42BPBQ9Y5S2 AC011511.4-201ENST00000586529 1850 ntAPPRIS P1 TSL 5 BASIC36.28■■■■□ 3.4
CDC42BPBQ9Y5S2 MAPKAPK2-201ENST00000294981 2171 ntTSL 1 (best) BASIC36.27■■■■□ 3.4
CDC42BPBQ9Y5S2 SDSL-202ENST00000403593 1449 ntAPPRIS P1 TSL 1 (best) BASIC36.27■■■■□ 3.4
CDC42BPBQ9Y5S2 PHF11-202ENST00000378319 1359 ntAPPRIS P3 TSL 1 (best) BASIC36.26■■■■□ 3.4
CDC42BPBQ9Y5S2 GPR160-201ENST00000355897 2039 ntAPPRIS P1 TSL 1 (best) BASIC36.26■■■■□ 3.4
CDC42BPBQ9Y5S2 PRICKLE4-201ENST00000394259 939 ntAPPRIS ALT2 TSL 5 BASIC36.26■■■■□ 3.4
CDC42BPBQ9Y5S2 SSSCA1-AS1-201ENST00000567594 614 ntBASIC36.26■■■■□ 3.4
CDC42BPBQ9Y5S2 AC005837.3-201ENST00000612163 286 ntBASIC36.26■■■■□ 3.4
CDC42BPBQ9Y5S2 GPX4-213ENST00000622390 1002 ntTSL 5 BASIC36.25■■■■□ 3.39
CDC42BPBQ9Y5S2 AL031432.3-201ENST00000607698 485 ntBASIC36.25■■■■□ 3.39
CDC42BPBQ9Y5S2 PAIP1-208ENST00000514514 1603 ntTSL 5 BASIC36.25■■■■□ 3.39
CDC42BPBQ9Y5S2 GPR75-ASB3-201ENST00000406625 2113 ntAPPRIS P1 TSL 2 BASIC36.25■■■■□ 3.39
CDC42BPBQ9Y5S2 SHF-208ENST00000560734 1731 ntTSL 3 BASIC36.24■■■■□ 3.39
CDC42BPBQ9Y5S2 RHEB-201ENST00000262187 2075 ntAPPRIS P1 TSL 1 (best) BASIC36.24■■■■□ 3.39
CDC42BPBQ9Y5S2 RRAD-201ENST00000299759 1569 ntAPPRIS P1 TSL 1 (best) BASIC36.24■■■■□ 3.39
CDC42BPBQ9Y5S2 CTSA-203ENST00000372459 1972 ntTSL 1 (best) BASIC36.24■■■■□ 3.39
CDC42BPBQ9Y5S2 SUDS3P1-201ENST00000505831 966 ntBASIC36.24■■■■□ 3.39
CDC42BPBQ9Y5S2 SPAG16-201ENST00000272898 1059 ntTSL 5 BASIC36.23■■■■□ 3.39
CDC42BPBQ9Y5S2 AC106739.1-201ENST00000617035 715 ntBASIC36.23■■■■□ 3.39
CDC42BPBQ9Y5S2 HOXD13-201ENST00000392539 2240 ntAPPRIS P1 TSL 1 (best) BASIC36.23■■■■□ 3.39
CDC42BPBQ9Y5S2 MTCH1-201ENST00000373616 2006 ntTSL 1 (best) BASIC36.23■■■■□ 3.39
CDC42BPBQ9Y5S2 GSX2-205ENST00000611459 1262 ntAPPRIS P1 TSL 1 (best) BASIC36.22■■■■□ 3.39
CDC42BPBQ9Y5S2 KRTAP5-4-202ENST00000616115 660 ntAPPRIS ALT2 TSL 5 BASIC36.22■■■■□ 3.39
CDC42BPBQ9Y5S2 TNFSF12-TNFSF13-201ENST00000293826 1816 ntAPPRIS P1 TSL 1 (best) BASIC36.22■■■■□ 3.39
CDC42BPBQ9Y5S2 SSR2-210ENST00000480567 895 ntAPPRIS P1 TSL 2 BASIC36.22■■■■□ 3.39
CDC42BPBQ9Y5S2 HOXA11-AS1_1.1-201ENST00000613939 98 ntBASIC36.22■■■■□ 3.39
CDC42BPBQ9Y5S2 MRPL41-201ENST00000371443 1262 ntAPPRIS P1 TSL 1 (best) BASIC36.21■■■■□ 3.39
CDC42BPBQ9Y5S2 SHISA9-205ENST00000639941 1135 ntAPPRIS ALT2 TSL 5 BASIC36.21■■■■□ 3.39
CDC42BPBQ9Y5S2 KLC3-201ENST00000391946 1780 ntAPPRIS P2 TSL 1 (best) BASIC36.21■■■■□ 3.39
CDC42BPBQ9Y5S2 MEIS3-204ENST00000558555 1715 ntAPPRIS ALT2 TSL 5 BASIC36.2■■■■□ 3.39
CDC42BPBQ9Y5S2 LINC01632-201ENST00000615763 496 ntTSL 3 BASIC36.2■■■■□ 3.38
CDC42BPBQ9Y5S2 PSKH1-202ENST00000570631 1509 ntTSL 1 (best) BASIC36.19■■■■□ 3.38
Retrieved 100 of 98,524 protein–RNA pairs in 14.7 ms