Protein–RNA interactions for Protein: Q9Y5H2

PCDHGA11, Protocadherin gamma-A11, humanhuman

Predictions only

Length 935 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA11Q9Y5H2 FBXW5-201ENST00000325285 2274 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
PCDHGA11Q9Y5H2 MEIOB-203ENST00000412554 1884 ntAPPRIS P1 TSL 5 BASIC22.81■■□□□ 1.24
PCDHGA11Q9Y5H2 PRDM13-202ENST00000369215 2429 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
PCDHGA11Q9Y5H2 PCOLCE2-201ENST00000295992 2021 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
PCDHGA11Q9Y5H2 SLC35B2-202ENST00000393812 2043 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
PCDHGA11Q9Y5H2 GNAL-201ENST00000269162 1722 ntAPPRIS P1 TSL 2 BASIC22.81■■□□□ 1.24
PCDHGA11Q9Y5H2 RABEP2-203ENST00000544477 1645 ntTSL 2 BASIC22.81■■□□□ 1.24
PCDHGA11Q9Y5H2 ACSF2-203ENST00000502667 2098 ntTSL 2 BASIC22.81■■□□□ 1.24
PCDHGA11Q9Y5H2 ITM2C-203ENST00000335005 1889 ntTSL 1 (best) BASIC22.81■■□□□ 1.24
PCDHGA11Q9Y5H2 TRIM14-203ENST00000375098 1792 ntAPPRIS P1 TSL 2 BASIC22.81■■□□□ 1.24
PCDHGA11Q9Y5H2 RARA-203ENST00000394086 2008 ntTSL 2 BASIC22.81■■□□□ 1.24
PCDHGA11Q9Y5H2 IQANK1-201ENST00000527139 1803 ntAPPRIS P1 TSL 5 BASIC22.8■■□□□ 1.24
PCDHGA11Q9Y5H2 MPC1-201ENST00000341756 976 ntTSL 1 (best) BASIC22.8■■□□□ 1.24
PCDHGA11Q9Y5H2 MPC1-206ENST00000621630 977 ntAPPRIS ALT1 TSL 5 BASIC22.8■■□□□ 1.24
PCDHGA11Q9Y5H2 MPC1-207ENST00000621685 1192 ntTSL 5 BASIC22.8■■□□□ 1.24
PCDHGA11Q9Y5H2 PARL-202ENST00000317096 1414 ntAPPRIS P1 TSL 1 (best) BASIC22.8■■□□□ 1.24
PCDHGA11Q9Y5H2 RNF19B-203ENST00000373456 2560 ntAPPRIS P3 TSL 1 (best) BASIC22.8■■□□□ 1.24
PCDHGA11Q9Y5H2 ELOC-206ENST00000520242 1573 ntAPPRIS P1 TSL 1 (best) BASIC22.8■■□□□ 1.24
PCDHGA11Q9Y5H2 HMCES-204ENST00000502878 1952 ntAPPRIS P1 TSL 1 (best) BASIC22.8■■□□□ 1.24
PCDHGA11Q9Y5H2 FAM124A-201ENST00000280057 2104 ntTSL 2 BASIC22.79■■□□□ 1.24
PCDHGA11Q9Y5H2 DCUN1D2-208ENST00000478244 2045 ntAPPRIS P1 TSL 1 (best) BASIC22.79■■□□□ 1.24
PCDHGA11Q9Y5H2 CBLN2-209ENST00000585159 2406 ntAPPRIS P1 TSL 1 (best) BASIC22.79■■□□□ 1.24
PCDHGA11Q9Y5H2 UBTD1-201ENST00000370664 1706 ntAPPRIS P1 TSL 1 (best) BASIC22.79■■□□□ 1.24
PCDHGA11Q9Y5H2 PYCR1-202ENST00000337943 1890 ntTSL 1 (best) BASIC22.79■■□□□ 1.24
PCDHGA11Q9Y5H2 DLK2-201ENST00000357338 2038 ntAPPRIS P3 TSL 2 BASIC22.79■■□□□ 1.24
PCDHGA11Q9Y5H2 NPAS3-201ENST00000346562 5847 ntAPPRIS P3 TSL 1 (best) BASIC22.78■■□□□ 1.24
PCDHGA11Q9Y5H2 BIN1-205ENST00000351659 2365 ntTSL 1 (best) BASIC22.78■■□□□ 1.24
PCDHGA11Q9Y5H2 PPP4C-201ENST00000279387 1407 ntAPPRIS P1 TSL 1 (best) BASIC22.78■■□□□ 1.24
PCDHGA11Q9Y5H2 PTOV1-201ENST00000391842 1875 ntAPPRIS P1 TSL 5 BASIC22.78■■□□□ 1.24
PCDHGA11Q9Y5H2 LYPD6B-204ENST00000409876 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC22.78■■□□□ 1.24
PCDHGA11Q9Y5H2 AL592293.1-201ENST00000502889 1188 ntBASIC22.78■■□□□ 1.24
PCDHGA11Q9Y5H2 SLC9A3-AS1-207ENST00000607286 1357 ntTSL 5 BASIC22.77■■□□□ 1.24
PCDHGA11Q9Y5H2 ANKRD9-204ENST00000559651 1444 ntAPPRIS P1 TSL 1 (best) BASIC22.77■■□□□ 1.24
PCDHGA11Q9Y5H2 SOCS2-202ENST00000536696 1065 ntAPPRIS P1 TSL 2 BASIC22.77■■□□□ 1.24
PCDHGA11Q9Y5H2 PXMP2-205ENST00000543589 632 ntTSL 3 BASIC22.77■■□□□ 1.24
PCDHGA11Q9Y5H2 UBE2E3-213ENST00000602959 909 ntAPPRIS P1 TSL 5 BASIC22.77■■□□□ 1.24
PCDHGA11Q9Y5H2 LYL1-201ENST00000264824 1490 ntAPPRIS P1 TSL 1 (best) BASIC22.77■■□□□ 1.24
PCDHGA11Q9Y5H2 AP003733.4-201ENST00000623785 1697 ntBASIC22.77■■□□□ 1.24
PCDHGA11Q9Y5H2 PGR-AS1-202ENST00000632820 1545 ntTSL 1 (best) BASIC22.77■■□□□ 1.24
PCDHGA11Q9Y5H2 RUNX2-210ENST00000576263 2256 ntTSL 5 BASIC22.77■■□□□ 1.23
PCDHGA11Q9Y5H2 ZNF784-202ENST00000591479 1559 ntTSL 1 (best) BASIC22.76■■□□□ 1.23
PCDHGA11Q9Y5H2 CCR10-201ENST00000332438 1773 ntAPPRIS P1 TSL 1 (best) BASIC22.76■■□□□ 1.23
PCDHGA11Q9Y5H2 KLF15-201ENST00000296233 2574 ntAPPRIS P1 TSL 1 (best) BASIC22.76■■□□□ 1.23
PCDHGA11Q9Y5H2 AC007383.2-202ENST00000435627 482 ntTSL 2 BASIC22.76■■□□□ 1.23
PCDHGA11Q9Y5H2 AC018755.3-202ENST00000596210 929 ntBASIC22.76■■□□□ 1.23
PCDHGA11Q9Y5H2 NPHS2-202ENST00000367616 1670 ntTSL 1 (best) BASIC22.76■■□□□ 1.23
PCDHGA11Q9Y5H2 FAM181A-204ENST00000557000 1652 ntAPPRIS P1 TSL 1 (best) BASIC22.76■■□□□ 1.23
PCDHGA11Q9Y5H2 ZNRF1-201ENST00000320619 2479 ntTSL 1 (best) BASIC22.75■■□□□ 1.23
PCDHGA11Q9Y5H2 FAM159A-204ENST00000517870 748 ntAPPRIS P1 TSL 1 (best) BASIC22.75■■□□□ 1.23
PCDHGA11Q9Y5H2 GNAS-AS1_1.1-201ENST00000621898 103 ntBASIC22.75■■□□□ 1.23
PCDHGA11Q9Y5H2 AKT1-203ENST00000407796 2710 ntAPPRIS P1 TSL 1 (best) BASIC22.75■■□□□ 1.23
PCDHGA11Q9Y5H2 RAX2-202ENST00000555978 2145 ntAPPRIS P1 TSL 1 (best) BASIC22.75■■□□□ 1.23
PCDHGA11Q9Y5H2 ZNF263-204ENST00000573578 1636 ntTSL 5 BASIC22.75■■□□□ 1.23
PCDHGA11Q9Y5H2 RARA-202ENST00000394081 2285 ntTSL 1 (best) BASIC22.74■■□□□ 1.23
PCDHGA11Q9Y5H2 NAT14-201ENST00000205194 1536 ntAPPRIS P1 TSL 1 (best) BASIC22.74■■□□□ 1.23
PCDHGA11Q9Y5H2 RPIA-201ENST00000283646 1848 ntAPPRIS P1 TSL 1 (best) BASIC22.74■■□□□ 1.23
PCDHGA11Q9Y5H2 BRD4-212ENST00000630599 726 ntTSL 2 BASIC22.74■■□□□ 1.23
PCDHGA11Q9Y5H2 OSCAR-202ENST00000351806 1375 ntAPPRIS ALT2 TSL 1 (best) BASIC22.74■■□□□ 1.23
PCDHGA11Q9Y5H2 TNIP2-206ENST00000510267 2006 ntAPPRIS ALT2 TSL 2 BASIC22.74■■□□□ 1.23
PCDHGA11Q9Y5H2 APBA3-201ENST00000316757 2075 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
PCDHGA11Q9Y5H2 MAP3K5-201ENST00000359015 5197 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
PCDHGA11Q9Y5H2 ZSWIM6-201ENST00000252744 5501 ntAPPRIS P1 TSL 5 BASIC22.73■■□□□ 1.23
PCDHGA11Q9Y5H2 IGFBP3-201ENST00000275521 2262 ntAPPRIS P3 TSL 1 (best) BASIC22.73■■□□□ 1.23
PCDHGA11Q9Y5H2 MYCL-201ENST00000372815 1944 ntTSL 1 (best) BASIC22.73■■□□□ 1.23
PCDHGA11Q9Y5H2 FAM98C-202ENST00000343358 1006 ntTSL 1 (best) BASIC22.73■■□□□ 1.23
PCDHGA11Q9Y5H2 FGD5-AS1-204ENST00000430166 1184 ntTSL 2 BASIC22.73■■□□□ 1.23
PCDHGA11Q9Y5H2 NKX2-5-204ENST00000521848 1027 ntTSL 2 BASIC22.73■■□□□ 1.23
PCDHGA11Q9Y5H2 PTH1R-206ENST00000430002 1947 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
PCDHGA11Q9Y5H2 NR2F6-201ENST00000291442 2404 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
PCDHGA11Q9Y5H2 AP2M1-202ENST00000382456 2091 ntAPPRIS ALT1 TSL 1 (best) BASIC22.72■■□□□ 1.23
PCDHGA11Q9Y5H2 SYT7-203ENST00000539008 2061 ntTSL 5 BASIC22.72■■□□□ 1.23
PCDHGA11Q9Y5H2 HMX2-201ENST00000339992 1628 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
PCDHGA11Q9Y5H2 LIME1-206ENST00000487026 805 ntAPPRIS ALT2 TSL 5 BASIC22.72■■□□□ 1.23
PCDHGA11Q9Y5H2 CASTOR2-201ENST00000616305 1257 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
PCDHGA11Q9Y5H2 ERGIC1-202ENST00000393784 2881 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
PCDHGA11Q9Y5H2 ARL2-SNX15-201ENST00000301886 2392 ntAPPRIS P1 TSL 2 BASIC22.72■■□□□ 1.23
PCDHGA11Q9Y5H2 TANGO2-204ENST00000401833 1920 ntTSL 5 BASIC22.72■■□□□ 1.23
PCDHGA11Q9Y5H2 PREB-202ENST00000406567 1910 ntTSL 5 BASIC22.72■■□□□ 1.23
PCDHGA11Q9Y5H2 AL022341.2-201ENST00000573609 1417 ntTSL 3 BASIC22.72■■□□□ 1.23
PCDHGA11Q9Y5H2 ARHGAP29-202ENST00000370217 2043 ntTSL 1 (best) BASIC22.71■■□□□ 1.23
PCDHGA11Q9Y5H2 U85056.1-201ENST00000616429 682 ntBASIC22.71■■□□□ 1.23
PCDHGA11Q9Y5H2 TSPAN4-202ENST00000397396 1332 ntTSL 5 BASIC22.71■■□□□ 1.23
PCDHGA11Q9Y5H2 SMOX-202ENST00000305958 2233 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
PCDHGA11Q9Y5H2 BIN1-201ENST00000259238 2338 ntTSL 1 (best) BASIC22.71■■□□□ 1.23
PCDHGA11Q9Y5H2 RHOF-203ENST00000537171 1485 ntTSL 1 (best) BASIC22.71■■□□□ 1.23
PCDHGA11Q9Y5H2 RBM42-205ENST00000589871 1487 ntTSL 5 BASIC22.71■■□□□ 1.23
PCDHGA11Q9Y5H2 SMOX-203ENST00000339123 2074 ntTSL 1 (best) BASIC22.7■■□□□ 1.23
PCDHGA11Q9Y5H2 ANKRD54-201ENST00000215941 2184 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.23
PCDHGA11Q9Y5H2 FAM222B-205ENST00000577682 549 ntTSL 4 BASIC22.7■■□□□ 1.22
PCDHGA11Q9Y5H2 CENPVL1-201ENST00000602548 1620 ntAPPRIS P1 BASIC22.7■■□□□ 1.22
PCDHGA11Q9Y5H2 CENPVL2-201ENST00000634648 1620 ntAPPRIS P1 BASIC22.7■■□□□ 1.22
PCDHGA11Q9Y5H2 FJX1-201ENST00000317811 2450 ntAPPRIS P1 BASIC22.7■■□□□ 1.22
PCDHGA11Q9Y5H2 ARRDC2-202ENST00000379656 2528 ntTSL 2 BASIC22.69■■□□□ 1.22
PCDHGA11Q9Y5H2 CUEDC1-202ENST00000407144 2190 ntAPPRIS P1 TSL 5 BASIC22.69■■□□□ 1.22
PCDHGA11Q9Y5H2 TBL2-222ENST00000610724 2165 ntTSL 5 BASIC22.69■■□□□ 1.22
PCDHGA11Q9Y5H2 C7orf25-206ENST00000447342 1823 ntTSL 2 BASIC22.69■■□□□ 1.22
PCDHGA11Q9Y5H2 HADH-203ENST00000505878 1719 ntTSL 1 (best) BASIC22.69■■□□□ 1.22
PCDHGA11Q9Y5H2 RABL6-204ENST00000371671 1580 ntAPPRIS ALT2 TSL 1 (best) BASIC22.69■■□□□ 1.22
PCDHGA11Q9Y5H2 C20orf24-201ENST00000342422 896 ntTSL 2 BASIC22.69■■□□□ 1.22
PCDHGA11Q9Y5H2 C20orf24-202ENST00000344795 1114 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
Retrieved 100 of 98,524 protein–RNA pairs in 77.2 ms