Protein–RNA interactions for Protein: Q9Y2R4

DDX52, Probable ATP-dependent RNA helicase DDX52, humanhuman

Known RBP eCLIP

Length 599 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX52Q9Y2R4 PID1-202ENST00000392054 2745 ntTSL 2 BASIC14.36□□□□□ -0.113e-14■■■■□ 19.4
DDX52Q9Y2R4 PID1-203ENST00000392055 2533 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.123e-14■■■■□ 19.4
DDX52Q9Y2R4 PID1-204ENST00000409462 2387 ntTSL 1 (best) BASIC14.15□□□□□ -0.143e-14■■■■□ 19.4
DDX52Q9Y2R4 PID1-201ENST00000354069 839 ntTSL 3 BASIC9.76□□□□□ -0.853e-14■■■■□ 19.4
DDX52Q9Y2R4 PID1-205ENST00000482518 479 ntTSL 25.82□□□□□ -1.483e-14■■■■□ 19.4
DDX52Q9Y2R4 TNRC18-202ENST00000399434 1459 ntTSL 2 BASIC19.24■□□□□ 0.673e-6■■■■□ 19.4
DDX52Q9Y2R4 TNRC18-203ENST00000399537 10572 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.113e-6■■■■□ 19.4
DDX52Q9Y2R4 TNRC18-205ENST00000430969 10562 ntAPPRIS P2 TSL 5 BASIC14.39□□□□□ -0.113e-6■■■■□ 19.4
DDX52Q9Y2R4 DAZAP1-204ENST00000586579 619 ntTSL 326.96■■□□□ 1.915e-7■■■■□ 19.4
DDX52Q9Y2R4 KLHL24-203ENST00000437402 563 ntTSL 526.23■■□□□ 1.793e-7■■■■□ 19.4
DDX52Q9Y2R4 KLHL24-215ENST00000493074 627 ntTSL 424.94■■□□□ 1.583e-7■■■■□ 19.4
DDX52Q9Y2R4 KLHL24-213ENST00000482138 588 ntTSL 424.94■■□□□ 1.583e-7■■■■□ 19.4
DDX52Q9Y2R4 KLHL24-204ENST00000454495 603 ntTSL 324.26■■□□□ 1.473e-7■■■■□ 19.4
DDX52Q9Y2R4 KLHL24-202ENST00000427201 562 ntTSL 423.43■■□□□ 1.343e-7■■■■□ 19.4
DDX52Q9Y2R4 KLHL24-206ENST00000461813 587 ntTSL 423.43■■□□□ 1.343e-7■■■■□ 19.4
DDX52Q9Y2R4 KLHL24-209ENST00000473045 542 ntTSL 422.58■■□□□ 1.213e-7■■■■□ 19.4
DDX52Q9Y2R4 KLHL24-208ENST00000468101 574 ntTSL 420.81■□□□□ 0.923e-7■■■■□ 19.4
DDX52Q9Y2R4 KLHL24-210ENST00000475827 545 ntTSL 418.73■□□□□ 0.593e-7■■■■□ 19.4
DDX52Q9Y2R4 KLHL24-201ENST00000242810 2345 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.583e-7■■■■□ 19.4
DDX52Q9Y2R4 KLHL24-205ENST00000454652 7380 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.573e-7■■■■□ 19.4
DDX52Q9Y2R4 ABHD17A-206ENST00000592757 740 ntTSL 322.66■■□□□ 1.222e-6■■■■□ 19.3
DDX52Q9Y2R4 YWHAZ-221ENST00000523131 567 ntTSL 524.18■■□□□ 1.461e-6■■■■□ 19.3
DDX52Q9Y2R4 YWHAZ-223ENST00000523938 626 ntTSL 523.78■■□□□ 1.41e-6■■■■□ 19.3
DDX52Q9Y2R4 YWHAZ-208ENST00000418997 996 ntTSL 223.57■■□□□ 1.361e-6■■■■□ 19.3
DDX52Q9Y2R4 YWHAZ-210ENST00000437293 701 ntTSL 322.83■■□□□ 1.251e-6■■■■□ 19.3
DDX52Q9Y2R4 YWHAZ-206ENST00000395957 5248 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.251e-6■■■■□ 19.3
DDX52Q9Y2R4 YWHAZ-202ENST00000395948 812 ntTSL 3 BASIC11.02□□□□□ -0.651e-6■■■■□ 19.3
DDX52Q9Y2R4 YWHAZ-201ENST00000353245 2829 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.791e-6■■■■□ 19.3
DDX52Q9Y2R4 YWHAZ-211ENST00000457309 3007 ntAPPRIS P1 TSL 2 BASIC3.71□□□□□ -1.821e-6■■■■□ 19.3
DDX52Q9Y2R4 YWHAE-213ENST00000576854 1374 nt27.08■■□□□ 1.933e-6■■■□□ 19.2
DDX52Q9Y2R4 YWHAE-204ENST00000486241 691 ntTSL 217.75■□□□□ 0.433e-6■■■□□ 19.2
DDX52Q9Y2R4 YWHAE-208ENST00000571732 1818 ntTSL 1 (best) BASIC17.7■□□□□ 0.423e-6■■■□□ 19.2
DDX52Q9Y2R4 YWHAE-201ENST00000264335 2211 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.213e-6■■■□□ 19.2
DDX52Q9Y2R4 YWHAE-212ENST00000575977 540 ntTSL 2 BASIC15.31■□□□□ 0.043e-6■■■□□ 19.2
DDX52Q9Y2R4 YWHAE-205ENST00000489287 465 ntTSL 213.39□□□□□ -0.273e-6■■■□□ 19.2
DDX52Q9Y2R4 YWHAE-210ENST00000573026 780 ntTSL 3 BASIC12.34□□□□□ -0.433e-6■■■□□ 19.2
DDX52Q9Y2R4 YWHAE-211ENST00000573196 739 ntTSL 212.34□□□□□ -0.433e-6■■■□□ 19.2
DDX52Q9Y2R4 YWHAE-207ENST00000498643 312 ntTSL 312.02□□□□□ -0.493e-6■■■□□ 19.2
DDX52Q9Y2R4 YWHAE-203ENST00000469398 676 ntTSL 210.6□□□□□ -0.713e-6■■■□□ 19.2
DDX52Q9Y2R4 CTBP1-214ENST00000514495 564 ntTSL 232.82■■■□□ 2.841e-6■■■□□ 19.2
DDX52Q9Y2R4 CTBP1-217ENST00000515399 985 ntTSL 323.32■■□□□ 1.321e-6■■■□□ 19.2
DDX52Q9Y2R4 DDX5-210ENST00000578804 2021 ntTSL 1 (best) BASIC14.83□□□□□ -0.041e-6■■■□□ 19.2
DDX52Q9Y2R4 GUK1-214ENST00000460224 639 ntTSL 518.49■□□□□ 0.551e-6■■■□□ 19.2
DDX52Q9Y2R4 GUK1-211ENST00000412265 1012 ntTSL 515.92■□□□□ 0.141e-6■■■□□ 19.2
DDX52Q9Y2R4 GUK1-221ENST00000472939 314 ntTSL 315.7■□□□□ 0.11e-6■■■□□ 19.2
DDX52Q9Y2R4 GUK1-229ENST00000485733 345 ntTSL 315.12■□□□□ 0.011e-6■■■□□ 19.2
DDX52Q9Y2R4 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC21.17■□□□□ 0.983e-6■■■□□ 19.1
DDX52Q9Y2R4 FGFR3-202ENST00000340107 4293 ntAPPRIS ALT2 TSL 5 BASIC19.92■□□□□ 0.783e-6■■■□□ 19.1
DDX52Q9Y2R4 FGFR3-205ENST00000440486 4287 ntAPPRIS P3 TSL 5 BASIC19.76■□□□□ 0.753e-6■■■□□ 19.1
DDX52Q9Y2R4 FGFR3-208ENST00000481110 4217 ntTSL 1 (best) BASIC18.05■□□□□ 0.483e-6■■■□□ 19.1
DDX52Q9Y2R4 FGFR3-204ENST00000412135 3951 ntTSL 5 BASIC17.69■□□□□ 0.423e-6■■■□□ 19.1
DDX52Q9Y2R4 FGFR3-203ENST00000352904 3733 ntTSL 1 (best) BASIC16.8■□□□□ 0.283e-6■■■□□ 19.1
DDX52Q9Y2R4 FGFR3-201ENST00000260795 4132 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.083e-6■■■□□ 19.1
DDX52Q9Y2R4 DDX5-228ENST00000584279 676 ntTSL 324.11■■□□□ 1.456e-7■■■□□ 19.1
DDX52Q9Y2R4 DDX5-205ENST00000577922 996 ntTSL 524.11■■□□□ 1.456e-7■■■□□ 19.1
DDX52Q9Y2R4 DDX5-220ENST00000581806 576 ntTSL 419.24■□□□□ 0.676e-7■■■□□ 19.1
DDX52Q9Y2R4 DDX5-201ENST00000225792 2554 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.546e-7■■■□□ 19.1
DDX52Q9Y2R4 DDX5-232ENST00000585111 1051 ntTSL 217.95■□□□□ 0.466e-7■■■□□ 19.1
DDX52Q9Y2R4 DDX5-219ENST00000581697 580 ntTSL 517.81■□□□□ 0.446e-7■■■□□ 19.1
DDX52Q9Y2R4 DDX5-235ENST00000630471 473 ntTSL 4 BASIC17.27■□□□□ 0.366e-7■■■□□ 19.1
DDX52Q9Y2R4 DDX5-207ENST00000578400 575 ntTSL 516.38■□□□□ 0.216e-7■■■□□ 19.1
DDX52Q9Y2R4 DDX5-218ENST00000581693 2156 ntTSL 513.48□□□□□ -0.256e-7■■■□□ 19.1
DDX52Q9Y2R4 DDX5-233ENST00000585223 699 ntTSL 213.3□□□□□ -0.286e-7■■■□□ 19.1
DDX52Q9Y2R4 DDX5-203ENST00000540698 2225 ntTSL 513.21□□□□□ -0.296e-7■■■□□ 19.1
DDX52Q9Y2R4 DDX5-202ENST00000450599 2077 ntTSL 2 BASIC11.83□□□□□ -0.526e-7■■■□□ 19.1
DDX52Q9Y2R4 DDX5-231ENST00000585060 572 ntTSL 411.03□□□□□ -0.646e-7■■■□□ 19.1
DDX52Q9Y2R4 DDX5-215ENST00000581230 3558 ntTSL 28.79□□□□□ -16e-7■■■□□ 19.1
DDX52Q9Y2R4 CTBP1-212ENST00000513420 704 ntTSL 317.41■□□□□ 0.382e-6■■■□□ 19.1
DDX52Q9Y2R4 GAK-212ENST00000510022 618 ntTSL 411.32□□□□□ -0.62e-6■■■□□ 19.1
DDX52Q9Y2R4 GAK-215ENST00000511229 568 ntTSL 36.64□□□□□ -1.352e-6■■■□□ 19.1
DDX52Q9Y2R4 SS18L1-203ENST00000450482 781 ntTSL 513.85□□□□□ -0.191e-6■■■□□ 19.1
DDX52Q9Y2R4 SS18L1-201ENST00000331758 4493 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.731e-6■■■□□ 19.1
DDX52Q9Y2R4 MT-TH-201ENST00000387441 69 ntBASIC4.02□□□□□ -1.771e-323■■■□□ 19
DDX52Q9Y2R4 SEPT5-211ENST00000455843 4113 ntTSL 1 (best)15.73■□□□□ 0.113e-6■■■□□ 19
DDX52Q9Y2R4 MAST1-208ENST00000591495 1496 ntTSL 5 BASIC24.3■■□□□ 1.487e-6■■■□□ 18.9
DDX52Q9Y2R4 RAB11FIP3-201ENST00000262305 4831 ntAPPRIS P2 TSL 1 (best) BASIC23.29■■□□□ 1.327e-6■■■□□ 18.9
DDX52Q9Y2R4 TCTEX1D2-201ENST00000325318 673 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.277e-6■■■□□ 18.9
DDX52Q9Y2R4 C1orf159-213ENST00000472741 661 ntTSL 421.42■■□□□ 1.027e-6■■■□□ 18.9
DDX52Q9Y2R4 C1orf159-212ENST00000467751 2099 ntTSL 221.4■■□□□ 1.027e-6■■■□□ 18.9
DDX52Q9Y2R4 TM4SF19-TCTEX1D2-201ENST00000442633 964 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.947e-6■■■□□ 18.9
DDX52Q9Y2R4 C1orf159-205ENST00000421241 1841 ntAPPRIS P3 TSL 2 BASIC20.9■□□□□ 0.947e-6■■■□□ 18.9
DDX52Q9Y2R4 C1orf159-218ENST00000482816 982 ntTSL 520.82■□□□□ 0.927e-6■■■□□ 18.9
DDX52Q9Y2R4 TCTEX1D2-203ENST00000446494 800 ntTSL 320.72■□□□□ 0.917e-6■■■□□ 18.9
DDX52Q9Y2R4 C1orf159-207ENST00000434641 842 ntAPPRIS ALT2 TSL 520.67■□□□□ 0.97e-6■■■□□ 18.9
DDX52Q9Y2R4 C1orf159-204ENST00000379339 2429 ntAPPRIS ALT2 TSL 2 BASIC20.38■□□□□ 0.857e-6■■■□□ 18.9
DDX52Q9Y2R4 RAB11FIP3-204ENST00000449879 580 ntTSL 319.66■□□□□ 0.747e-6■■■□□ 18.9
DDX52Q9Y2R4 C1orf159-203ENST00000379325 2010 ntTSL 219.34■□□□□ 0.697e-6■■■□□ 18.9
DDX52Q9Y2R4 MAST1-207ENST00000590883 1717 ntTSL 518.97■□□□□ 0.637e-6■■■□□ 18.9
DDX52Q9Y2R4 RAB11FIP3-206ENST00000452814 804 ntTSL 518.58■□□□□ 0.567e-6■■■□□ 18.9
DDX52Q9Y2R4 C1orf159-217ENST00000480643 579 ntTSL 418.35■□□□□ 0.537e-6■■■□□ 18.9
DDX52Q9Y2R4 SDC3-203ENST00000471567 589 ntTSL 318.16■□□□□ 0.57e-6■■■□□ 18.9
DDX52Q9Y2R4 C1orf159-215ENST00000475119 740 ntAPPRIS ALT2 TSL 317.63■□□□□ 0.417e-6■■■□□ 18.9
DDX52Q9Y2R4 C1orf159-209ENST00000462097 836 ntAPPRIS ALT2 TSL 317.44■□□□□ 0.387e-6■■■□□ 18.9
DDX52Q9Y2R4 HSPG2-214ENST00000635682 921 ntTSL 517.42■□□□□ 0.381e-10■■■□□ 18.9
DDX52Q9Y2R4 RAB11FIP3-202ENST00000412256 558 ntTSL 216.48■□□□□ 0.237e-6■■■□□ 18.9
DDX52Q9Y2R4 MAST1-201ENST00000251472 4833 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.187e-6■■■□□ 18.9
DDX52Q9Y2R4 C3-201ENST00000245907 5263 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.057e-6■■■□□ 18.9
DDX52Q9Y2R4 C1orf159-216ENST00000477196 3214 ntTSL 215.22■□□□□ 0.037e-6■■■□□ 18.9
DDX52Q9Y2R4 AC069257.3-201ENST00000431391 708 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.047e-6■■■□□ 18.9
DDX52Q9Y2R4 AGO2-205ENST00000519980 3141 ntTSL 1 (best) BASIC14.12□□□□□ -0.157e-6■■■□□ 18.9
Retrieved 100 of 4,483 protein–RNA pairs in 67.8 ms