Protein–RNA interactions for Protein: Q9UNS2

COPS3, COP9 signalosome complex subunit 3, humanhuman

Predictions only

Length 423 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3Q9UNS2 ARHGEF9-210ENST00000623517 2143 ntTSL 2 BASIC20.97■□□□□ 0.95
COPS3Q9UNS2 ARL6IP4-211ENST00000454885 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
COPS3Q9UNS2 TRIM14-203ENST00000375098 1792 ntAPPRIS P1 TSL 2 BASIC20.97■□□□□ 0.95
COPS3Q9UNS2 UBALD2-201ENST00000327490 1593 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
COPS3Q9UNS2 CCNJL-201ENST00000257536 1848 ntAPPRIS P1 TSL 2 BASIC20.97■□□□□ 0.95
COPS3Q9UNS2 NAB1-202ENST00000409581 2360 ntAPPRIS P3 TSL 2 BASIC20.96■□□□□ 0.95
COPS3Q9UNS2 CTBP1-203ENST00000382952 2467 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
COPS3Q9UNS2 FAM168B-201ENST00000389915 944 ntAPPRIS P1 TSL 3 BASIC20.96■□□□□ 0.95
COPS3Q9UNS2 R3HDM4-201ENST00000361574 1815 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
COPS3Q9UNS2 LINC00543-201ENST00000567234 1845 ntBASIC20.96■□□□□ 0.95
COPS3Q9UNS2 ST3GAL5-269ENST00000640992 2292 ntAPPRIS ALT2 TSL 5 BASIC20.95■□□□□ 0.95
COPS3Q9UNS2 ZDHHC1-201ENST00000348579 2047 ntAPPRIS P2 TSL 1 (best) BASIC20.95■□□□□ 0.94
COPS3Q9UNS2 HSPBP1-201ENST00000255631 1768 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
COPS3Q9UNS2 ZFYVE28-202ENST00000503000 1874 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
COPS3Q9UNS2 ELOC-206ENST00000520242 1573 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
COPS3Q9UNS2 THRA-201ENST00000264637 2538 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
COPS3Q9UNS2 PARD6A-201ENST00000219255 1248 ntAPPRIS P3 TSL 1 (best) BASIC20.95■□□□□ 0.94
COPS3Q9UNS2 BANF1-208ENST00000533166 1135 ntAPPRIS P1 TSL 2 BASIC20.95■□□□□ 0.94
COPS3Q9UNS2 CADPS-203ENST00000383710 5471 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
COPS3Q9UNS2 SYT7-202ENST00000535826 1621 ntTSL 5 BASIC20.95■□□□□ 0.94
COPS3Q9UNS2 PMS1-220ENST00000618056 1468 ntTSL 5 BASIC20.94■□□□□ 0.94
COPS3Q9UNS2 TXNRD2-201ENST00000334363 1893 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
COPS3Q9UNS2 IL15RA-214ENST00000525219 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
COPS3Q9UNS2 AP000802.1-201ENST00000500537 1934 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
COPS3Q9UNS2 MIR3960-201ENST00000583311 91 ntBASIC20.94■□□□□ 0.94
COPS3Q9UNS2 CDYL-203ENST00000397588 2184 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
COPS3Q9UNS2 C7orf25-206ENST00000447342 1823 ntTSL 2 BASIC20.93■□□□□ 0.94
COPS3Q9UNS2 MCCD1-201ENST00000376191 955 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
COPS3Q9UNS2 ZDHHC3-203ENST00000342790 1336 ntTSL 5 BASIC20.93■□□□□ 0.94
COPS3Q9UNS2 TARSL2-207ENST00000615656 2356 ntAPPRIS ALT2 TSL 5 BASIC20.93■□□□□ 0.94
COPS3Q9UNS2 DNAJB11-201ENST00000265028 1688 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
COPS3Q9UNS2 ARG2-201ENST00000261783 2045 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
COPS3Q9UNS2 NKIRAS2-208ENST00000462043 585 ntTSL 4 BASIC20.92■□□□□ 0.94
COPS3Q9UNS2 CTSZ-201ENST00000217131 1495 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
COPS3Q9UNS2 SMPD5-203ENST00000639008 1464 ntBASIC20.92■□□□□ 0.94
COPS3Q9UNS2 DLEU2-208ENST00000621282 3068 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
COPS3Q9UNS2 PLEKHO1-202ENST00000369126 1809 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
COPS3Q9UNS2 TANGO2-204ENST00000401833 1920 ntTSL 5 BASIC20.92■□□□□ 0.94
COPS3Q9UNS2 HEXDC-202ENST00000337014 2285 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
COPS3Q9UNS2 ARSB-206ENST00000565165 1772 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
COPS3Q9UNS2 SAMD4B-208ENST00000598913 2877 ntAPPRIS ALT1 TSL 1 (best) BASIC20.91■□□□□ 0.94
COPS3Q9UNS2 CADPS-219ENST00000612439 5455 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
COPS3Q9UNS2 PTH1R-206ENST00000430002 1947 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
COPS3Q9UNS2 LRRC24-201ENST00000529415 1758 ntAPPRIS P2 TSL 1 (best) BASIC20.9■□□□□ 0.94
COPS3Q9UNS2 NPHS2-202ENST00000367616 1670 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
COPS3Q9UNS2 GNB2-203ENST00000393926 1641 ntAPPRIS P1 TSL 5 BASIC20.9■□□□□ 0.94
COPS3Q9UNS2 VEGFA-202ENST00000324450 954 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
COPS3Q9UNS2 VEGFA-203ENST00000372055 1286 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
COPS3Q9UNS2 VEGFA-208ENST00000417285 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
COPS3Q9UNS2 VEGFA-213ENST00000482630 1146 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
COPS3Q9UNS2 VEGFA-227ENST00000615393 984 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
COPS3Q9UNS2 VEGFA-228ENST00000617771 1116 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
COPS3Q9UNS2 VEGFA-229ENST00000621747 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
COPS3Q9UNS2 VEGFA-230ENST00000640482 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
COPS3Q9UNS2 VEGFA-232ENST00000640653 1170 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
COPS3Q9UNS2 GOLGA7-201ENST00000357743 2027 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
COPS3Q9UNS2 WRNIP1-205ENST00000618555 2651 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
COPS3Q9UNS2 ADAM22-209ENST00000439864 2576 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
COPS3Q9UNS2 C16orf87-201ENST00000285697 1585 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
COPS3Q9UNS2 ANKRD54-201ENST00000215941 2184 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
COPS3Q9UNS2 FAM21EP-202ENST00000456967 2177 ntTSL 2 BASIC20.89■□□□□ 0.94
COPS3Q9UNS2 TTLL11-202ENST00000373776 2012 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
COPS3Q9UNS2 RARA-204ENST00000394089 2024 ntAPPRIS P1 TSL 2 BASIC20.89■□□□□ 0.93
COPS3Q9UNS2 AGAP3-201ENST00000335367 2675 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
COPS3Q9UNS2 ANO8-204ENST00000630631 1905 ntTSL 5 BASIC20.89■□□□□ 0.93
COPS3Q9UNS2 HSBP1L1-201ENST00000451882 771 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
COPS3Q9UNS2 AC092296.2-201ENST00000589470 999 ntBASIC20.89■□□□□ 0.93
COPS3Q9UNS2 CASK-201ENST00000378154 2494 ntTSL 5 BASIC20.89■□□□□ 0.93
COPS3Q9UNS2 SLC35B2-204ENST00000537814 1715 ntTSL 2 BASIC20.89■□□□□ 0.93
COPS3Q9UNS2 SMOX-201ENST00000278795 2164 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
COPS3Q9UNS2 TMSB15B-202ENST00000436583 2186 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
COPS3Q9UNS2 PNCK-204ENST00000370150 1612 ntAPPRIS P1 TSL 5 BASIC20.89■□□□□ 0.93
COPS3Q9UNS2 SRXN1-201ENST00000381962 2698 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
COPS3Q9UNS2 TAZ-216ENST00000613002 1485 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
COPS3Q9UNS2 PKIG-205ENST00000372891 1443 ntAPPRIS P1 TSL 2 BASIC20.88■□□□□ 0.93
COPS3Q9UNS2 VPS53-211ENST00000571805 2356 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
COPS3Q9UNS2 NSMCE4A-202ENST00000369023 1394 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
COPS3Q9UNS2 FRMD8-203ENST00000416776 1818 ntTSL 2 BASIC20.88■□□□□ 0.93
COPS3Q9UNS2 CCR10-201ENST00000332438 1773 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
COPS3Q9UNS2 CDK2AP1-201ENST00000261692 1625 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
COPS3Q9UNS2 THRA-209ENST00000584985 2421 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
COPS3Q9UNS2 HSD11B2-201ENST00000326152 1900 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
COPS3Q9UNS2 KLC3-202ENST00000470402 1820 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
COPS3Q9UNS2 PAOX-203ENST00000357296 1633 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
COPS3Q9UNS2 INPP5J-206ENST00000404453 1613 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
COPS3Q9UNS2 ZBTB45-205ENST00000600990 2159 ntAPPRIS P1 TSL 5 BASIC20.87■□□□□ 0.93
COPS3Q9UNS2 ESR2-202ENST00000341099 2060 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
COPS3Q9UNS2 DOK3-205ENST00000501403 1872 ntAPPRIS P1 TSL 5 BASIC20.86■□□□□ 0.93
COPS3Q9UNS2 AC141586.4-201ENST00000624558 1573 ntBASIC20.86■□□□□ 0.93
COPS3Q9UNS2 TRAP1-202ENST00000538171 2052 ntTSL 2 BASIC20.86■□□□□ 0.93
COPS3Q9UNS2 ALKAL1-201ENST00000358543 1217 ntAPPRIS P2 TSL 1 (best) BASIC20.86■□□□□ 0.93
COPS3Q9UNS2 HSPB6-202ENST00000587965 711 ntTSL 2 BASIC20.86■□□□□ 0.93
COPS3Q9UNS2 ST3GAL5-214ENST00000638178 2034 ntTSL 5 BASIC20.86■□□□□ 0.93
COPS3Q9UNS2 LTBP3-212ENST00000529189 1997 ntTSL 2 BASIC20.86■□□□□ 0.93
COPS3Q9UNS2 COQ2-201ENST00000311461 1464 ntAPPRIS ALT2 TSL 5 BASIC20.86■□□□□ 0.93
COPS3Q9UNS2 PGF-203ENST00000553716 1699 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
COPS3Q9UNS2 CAPN12-212ENST00000601953 2381 ntTSL 5 BASIC20.86■□□□□ 0.93
COPS3Q9UNS2 GRIN2D-201ENST00000263269 5093 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
COPS3Q9UNS2 WDR38-202ENST00000613760 1323 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
COPS3Q9UNS2 GNPTG-201ENST00000204679 1983 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 38.2 ms