Protein–RNA interactions for Protein: Q9UKX7

NUP50, Nuclear pore complex protein Nup50, humanhuman

Predictions only

Length 468 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50Q9UKX7 CD6-206ENST00000452451 1782 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
NUP50Q9UKX7 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
NUP50Q9UKX7 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
NUP50Q9UKX7 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
NUP50Q9UKX7 HTRA2-201ENST00000258080 2370 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
NUP50Q9UKX7 ERN1-208ENST00000606895 2068 ntBASIC20.34■□□□□ 0.85
NUP50Q9UKX7 SLC9A3-AS1-207ENST00000607286 1357 ntTSL 5 BASIC20.34■□□□□ 0.85
NUP50Q9UKX7 TTC9-201ENST00000256367 5217 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
NUP50Q9UKX7 ZNRF1-201ENST00000320619 2479 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
NUP50Q9UKX7 IGDCC4-201ENST00000352385 6508 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
NUP50Q9UKX7 WHAMM-201ENST00000286760 5101 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
NUP50Q9UKX7 SMOX-202ENST00000305958 2233 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
NUP50Q9UKX7 POLE2-201ENST00000216367 1776 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
NUP50Q9UKX7 DENND1A-201ENST00000373618 3003 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
NUP50Q9UKX7 VPS53-211ENST00000571805 2356 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
NUP50Q9UKX7 ENHO-201ENST00000399775 1082 ntAPPRIS P1 TSL 2 BASIC20.34■□□□□ 0.85
NUP50Q9UKX7 VIPR2-204ENST00000421760 717 ntTSL 3 BASIC20.34■□□□□ 0.85
NUP50Q9UKX7 ARL6IP4-208ENST00000439686 796 ntAPPRIS ALT2 TSL 3 BASIC20.34■□□□□ 0.85
NUP50Q9UKX7 EMC10-206ENST00000598585 1610 ntAPPRIS ALT2 TSL 5 BASIC20.34■□□□□ 0.85
NUP50Q9UKX7 LOXL1-201ENST00000261921 2351 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
NUP50Q9UKX7 HTR6-201ENST00000289753 1984 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
NUP50Q9UKX7 GATA4-209ENST00000622443 1982 ntTSL 5 BASIC20.34■□□□□ 0.85
NUP50Q9UKX7 BAMBI-201ENST00000375533 1877 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
NUP50Q9UKX7 TBX1-201ENST00000329705 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.85
NUP50Q9UKX7 TSPY13P-201ENST00000338964 914 ntBASIC20.33■□□□□ 0.85
NUP50Q9UKX7 C16orf52-207ENST00000569656 1257 ntTSL 5 BASIC20.33■□□□□ 0.85
NUP50Q9UKX7 AC007029.1-201ENST00000604183 313 ntBASIC20.33■□□□□ 0.85
NUP50Q9UKX7 GTPBP3-202ENST00000358792 1951 ntAPPRIS P4 TSL 2 BASIC20.33■□□□□ 0.84
NUP50Q9UKX7 EML2-209ENST00000587152 2763 ntAPPRIS ALT2 TSL 2 BASIC20.33■□□□□ 0.84
NUP50Q9UKX7 ERMP1-202ENST00000339450 5376 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
NUP50Q9UKX7 DDAH2-212ENST00000375789 1688 ntAPPRIS P1 TSL 2 BASIC20.32■□□□□ 0.84
NUP50Q9UKX7 DDAH2-213ENST00000375792 1688 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
NUP50Q9UKX7 CCSAP-201ENST00000284617 5121 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
NUP50Q9UKX7 RPL27A-206ENST00000530022 878 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
NUP50Q9UKX7 GALNT8-202ENST00000433855 5977 ntTSL 2 BASIC20.32■□□□□ 0.84
NUP50Q9UKX7 CASK-201ENST00000378154 2494 ntTSL 5 BASIC20.32■□□□□ 0.84
NUP50Q9UKX7 SLC30A3-201ENST00000233535 2260 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
NUP50Q9UKX7 SMPD5-203ENST00000639008 1464 ntBASIC20.31■□□□□ 0.84
NUP50Q9UKX7 TTLL11-202ENST00000373776 2012 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
NUP50Q9UKX7 AC004987.1-201ENST00000428627 508 ntBASIC20.31■□□□□ 0.84
NUP50Q9UKX7 AC107214.1-201ENST00000457303 559 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
NUP50Q9UKX7 QDPR-208ENST00000513615 1188 ntTSL 2 BASIC20.31■□□□□ 0.84
NUP50Q9UKX7 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC20.31■□□□□ 0.84
NUP50Q9UKX7 ZNF76-203ENST00000373953 2716 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
NUP50Q9UKX7 CEBPA-AS1-201ENST00000592982 2198 ntBASIC20.31■□□□□ 0.84
NUP50Q9UKX7 CCDC136-206ENST00000464832 1720 ntAPPRIS ALT2 TSL 5 BASIC20.3■□□□□ 0.84
NUP50Q9UKX7 RASGRP1-201ENST00000310803 5023 ntAPPRIS P2 TSL 1 (best) BASIC20.3■□□□□ 0.84
NUP50Q9UKX7 RASGRP1-204ENST00000539159 5021 ntAPPRIS ALT1 TSL 5 BASIC20.3■□□□□ 0.84
NUP50Q9UKX7 SYT12-205ENST00000527043 1661 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
NUP50Q9UKX7 ATP5G2P3-201ENST00000429083 425 ntBASIC20.3■□□□□ 0.84
NUP50Q9UKX7 FAM222B-205ENST00000577682 549 ntTSL 4 BASIC20.3■□□□□ 0.84
NUP50Q9UKX7 LTK-202ENST00000355166 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
NUP50Q9UKX7 ASRGL1-202ENST00000415229 2270 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
NUP50Q9UKX7 APLP1-201ENST00000221891 2495 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
NUP50Q9UKX7 MXRA7-202ENST00000375036 1950 ntAPPRIS ALT2 TSL 2 BASIC20.3■□□□□ 0.84
NUP50Q9UKX7 PTPN2-202ENST00000327283 1706 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
NUP50Q9UKX7 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
NUP50Q9UKX7 R3HDM4-203ENST00000587975 1765 ntTSL 3 BASIC20.29■□□□□ 0.84
NUP50Q9UKX7 GNPTG-204ENST00000527137 386 ntTSL 2 BASIC20.29■□□□□ 0.84
NUP50Q9UKX7 TMEM121B-201ENST00000331437 4954 ntAPPRIS P3 BASIC20.29■□□□□ 0.84
NUP50Q9UKX7 SLC25A27-202ENST00000411689 2526 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
NUP50Q9UKX7 FOXK2-201ENST00000335255 5265 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
NUP50Q9UKX7 GRM6-202ENST00000517717 2673 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
NUP50Q9UKX7 TTC36-201ENST00000302783 874 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
NUP50Q9UKX7 OXLD1-201ENST00000374741 620 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
NUP50Q9UKX7 FLVCR1-AS1-203ENST00000426161 892 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
NUP50Q9UKX7 RAB4B-203ENST00000594800 1173 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
NUP50Q9UKX7 E2F5-203ENST00000418930 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
NUP50Q9UKX7 RAD51-208ENST00000532743 1515 ntTSL 2 BASIC20.27■□□□□ 0.84
NUP50Q9UKX7 CIB2-202ENST00000539011 1511 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
NUP50Q9UKX7 CARM1-201ENST00000327064 3330 ntAPPRIS P2 TSL 1 (best) BASIC20.27■□□□□ 0.84
NUP50Q9UKX7 KREMEN2-205ENST00000575769 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
NUP50Q9UKX7 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC20.26■□□□□ 0.83
NUP50Q9UKX7 MBD3-202ENST00000434436 2439 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
NUP50Q9UKX7 GATA2-AS1-202ENST00000468377 1578 ntTSL 2 BASIC20.26■□□□□ 0.83
NUP50Q9UKX7 LRRC73-201ENST00000372441 2121 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
NUP50Q9UKX7 TMEM221-201ENST00000341130 1930 ntAPPRIS P1 TSL 2 BASIC20.26■□□□□ 0.83
NUP50Q9UKX7 ITPKC-201ENST00000263370 3385 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
NUP50Q9UKX7 PPP1R14A-201ENST00000301242 777 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
NUP50Q9UKX7 C20orf24-201ENST00000342422 896 ntTSL 2 BASIC20.26■□□□□ 0.83
NUP50Q9UKX7 C20orf24-202ENST00000344795 1114 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
NUP50Q9UKX7 LINC01770-201ENST00000417917 634 ntTSL 2 BASIC20.26■□□□□ 0.83
NUP50Q9UKX7 UBE2D2-205ENST00000505548 1113 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
NUP50Q9UKX7 CCDC37-AS1-202ENST00000506660 986 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
NUP50Q9UKX7 AC133552.2-201ENST00000619106 1032 ntBASIC20.26■□□□□ 0.83
NUP50Q9UKX7 SPATA2L-201ENST00000289805 2335 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
NUP50Q9UKX7 VAV3-202ENST00000370056 4990 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
NUP50Q9UKX7 DUSP8P4-201ENST00000399538 1761 ntBASIC20.26■□□□□ 0.83
NUP50Q9UKX7 HIST2H3C-201ENST00000369158 1656 ntAPPRIS P1 BASIC20.26■□□□□ 0.83
NUP50Q9UKX7 HIST2H3A-201ENST00000403683 1656 ntAPPRIS P1 BASIC20.26■□□□□ 0.83
NUP50Q9UKX7 LSR-202ENST00000354900 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
NUP50Q9UKX7 IFI30-201ENST00000407280 1134 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
NUP50Q9UKX7 PSMG4-207ENST00000451246 824 ntTSL 3 BASIC20.25■□□□□ 0.83
NUP50Q9UKX7 GFER-205ENST00000569451 517 ntTSL 5 BASIC20.25■□□□□ 0.83
NUP50Q9UKX7 HOMER3-207ENST00000594794 903 ntTSL 5 BASIC20.25■□□□□ 0.83
NUP50Q9UKX7 KLF16-204ENST00000617223 1133 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
NUP50Q9UKX7 FGF20-201ENST00000180166 1688 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
NUP50Q9UKX7 BBC3-204ENST00000449228 1827 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
NUP50Q9UKX7 ARX-201ENST00000379044 2876 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
NUP50Q9UKX7 FUT11-202ENST00000394790 2175 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 33.5 ms