Protein–RNA interactions for Protein: Q9NYX4

CALY, Neuron-specific vesicular protein calcyon, humanhuman

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CALYQ9NYX4 LINC01233-202ENST00000598832 568 ntTSL 2 BASIC19.5■□□□□ 0.71
CALYQ9NYX4 TANGO2-204ENST00000401833 1920 ntTSL 5 BASIC19.5■□□□□ 0.71
CALYQ9NYX4 CENPVL1-201ENST00000602548 1620 ntAPPRIS P1 BASIC19.5■□□□□ 0.71
CALYQ9NYX4 CENPVL2-201ENST00000634648 1620 ntAPPRIS P1 BASIC19.5■□□□□ 0.71
CALYQ9NYX4 C7orf25-206ENST00000447342 1823 ntTSL 2 BASIC19.49■□□□□ 0.71
CALYQ9NYX4 TRIM52-AS1-202ENST00000507434 672 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
CALYQ9NYX4 PTH1R-206ENST00000430002 1947 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
CALYQ9NYX4 TSPAN4-202ENST00000397396 1332 ntTSL 5 BASIC19.49■□□□□ 0.71
CALYQ9NYX4 PINK1-201ENST00000321556 2660 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
CALYQ9NYX4 MAGI2-208ENST00000522391 4878 ntAPPRIS ALT2 TSL 5 BASIC19.48■□□□□ 0.71
CALYQ9NYX4 APBA3-201ENST00000316757 2075 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
CALYQ9NYX4 KRT18P60-201ENST00000312876 1297 ntBASIC19.48■□□□□ 0.71
CALYQ9NYX4 PSMG4-207ENST00000451246 824 ntTSL 3 BASIC19.48■□□□□ 0.71
CALYQ9NYX4 AC129492.7-201ENST00000622992 756 ntBASIC19.48■□□□□ 0.71
CALYQ9NYX4 MYCL-201ENST00000372815 1944 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
CALYQ9NYX4 SMOX-203ENST00000339123 2074 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
CALYQ9NYX4 PLEKHO1-202ENST00000369126 1809 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
CALYQ9NYX4 RHOF-203ENST00000537171 1485 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
CALYQ9NYX4 NFKBIE-201ENST00000275015 2581 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
CALYQ9NYX4 FOXO3B-201ENST00000395675 1928 ntBASIC19.47■□□□□ 0.71
CALYQ9NYX4 IDNK-203ENST00000405990 629 ntTSL 2 BASIC19.47■□□□□ 0.71
CALYQ9NYX4 IFI30-201ENST00000407280 1134 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
CALYQ9NYX4 TMEM191C-206ENST00000432134 1129 ntAPPRIS ALT2 TSL 5 BASIC19.47■□□□□ 0.71
CALYQ9NYX4 PTCH1-210ENST00000468211 1254 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
CALYQ9NYX4 NTF6A-201ENST00000591175 560 ntBASIC19.47■□□□□ 0.71
CALYQ9NYX4 RHOBTB3-206ENST00000506817 1432 ntTSL 2 BASIC19.47■□□□□ 0.71
CALYQ9NYX4 SHISA8-202ENST00000621082 1405 ntAPPRIS P2 TSL 5 BASIC19.47■□□□□ 0.71
CALYQ9NYX4 SLC35A2-209ENST00000452555 1563 ntTSL 2 BASIC19.47■□□□□ 0.71
CALYQ9NYX4 MRPS7-203ENST00000579002 1638 ntTSL 2 BASIC19.47■□□□□ 0.71
CALYQ9NYX4 PLEKHA8-201ENST00000258679 2293 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
CALYQ9NYX4 HADH-203ENST00000505878 1719 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
CALYQ9NYX4 EGR4-201ENST00000436467 2377 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
CALYQ9NYX4 EIF5A-211ENST00000576930 1439 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
CALYQ9NYX4 RIMKLB-205ENST00000535829 2236 ntAPPRIS P1 TSL 2 BASIC19.46■□□□□ 0.71
CALYQ9NYX4 ECEL1-202ENST00000409941 2322 ntAPPRIS ALT1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CALYQ9NYX4 ZC3H14-202ENST00000302216 2560 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
CALYQ9NYX4 TMEM185A-208ENST00000611119 2662 ntTSL 2 BASIC19.45■□□□□ 0.7
CALYQ9NYX4 C20orf24-203ENST00000373852 1059 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
CALYQ9NYX4 RSPO4-202ENST00000400634 722 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
CALYQ9NYX4 MIR6089-201ENST00000616698 64 ntBASIC19.45■□□□□ 0.7
CALYQ9NYX4 TBL2-222ENST00000610724 2165 ntTSL 5 BASIC19.44■□□□□ 0.7
CALYQ9NYX4 YWHAH-201ENST00000248975 1825 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CALYQ9NYX4 HDGFL2-210ENST00000621835 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
CALYQ9NYX4 AC104002.3-202ENST00000557170 1100 ntTSL 3 BASIC19.44■□□□□ 0.7
CALYQ9NYX4 FGF22-202ENST00000586042 1288 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
CALYQ9NYX4 ESRRA-203ENST00000406310 2218 ntAPPRIS ALT1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CALYQ9NYX4 RAP2A-201ENST00000245304 5487 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CALYQ9NYX4 C16orf72-201ENST00000327827 5953 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CALYQ9NYX4 ITM2C-203ENST00000335005 1889 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
CALYQ9NYX4 AL139125.2-201ENST00000623134 1869 ntBASIC19.43■□□□□ 0.7
CALYQ9NYX4 USP25-203ENST00000351097 2158 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
CALYQ9NYX4 DUSP22-201ENST00000344450 1485 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
CALYQ9NYX4 JMJD8-201ENST00000412368 2038 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
CALYQ9NYX4 OXLD1-201ENST00000374741 620 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CALYQ9NYX4 FAM136A-202ENST00000430566 885 ntTSL 3 BASIC19.43■□□□□ 0.7
CALYQ9NYX4 AC087393.1-201ENST00000582896 145 ntBASIC19.43■□□□□ 0.7
CALYQ9NYX4 FOXP4-203ENST00000373060 5948 ntTSL 5 BASIC19.43■□□□□ 0.7
CALYQ9NYX4 FOXP4-204ENST00000373063 5910 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
CALYQ9NYX4 BBC3-203ENST00000439096 1838 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CALYQ9NYX4 SUGCT-209ENST00000628514 1591 ntAPPRIS P4 TSL 1 (best) BASIC19.43■□□□□ 0.7
CALYQ9NYX4 MPST-203ENST00000401419 1345 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CALYQ9NYX4 RBMXL2-201ENST00000306904 1874 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
CALYQ9NYX4 CCDC151-202ENST00000586836 1867 ntTSL 2 BASIC19.43■□□□□ 0.7
CALYQ9NYX4 SLC22A18-201ENST00000312221 1628 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CALYQ9NYX4 DNAJB11-201ENST00000265028 1688 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CALYQ9NYX4 TBL1X-201ENST00000217964 5871 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
CALYQ9NYX4 LURAP1L-201ENST00000319264 1753 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CALYQ9NYX4 OTUD5-203ENST00000396743 2682 ntAPPRIS ALT1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CALYQ9NYX4 PPP2R2D-201ENST00000455566 5738 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CALYQ9NYX4 ARHGEF9-210ENST00000623517 2143 ntTSL 2 BASIC19.42■□□□□ 0.7
CALYQ9NYX4 RPIA-201ENST00000283646 1848 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CALYQ9NYX4 LTB4R2-205ENST00000543919 1560 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CALYQ9NYX4 HERC2P9-201ENST00000507787 1023 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
CALYQ9NYX4 LMAN2-208ENST00000515209 1149 ntAPPRIS ALT2 TSL 3 BASIC19.42■□□□□ 0.7
CALYQ9NYX4 SLC30A3-201ENST00000233535 2260 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CALYQ9NYX4 PCMT1-202ENST00000367380 1628 ntTSL 2 BASIC19.42■□□□□ 0.7
CALYQ9NYX4 PCMT1-211ENST00000544496 1628 ntTSL 2 BASIC19.42■□□□□ 0.7
CALYQ9NYX4 ADAD2-202ENST00000315906 1995 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
CALYQ9NYX4 AC105219.1-201ENST00000531565 1963 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
CALYQ9NYX4 RBFOX2-209ENST00000438146 1356 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
CALYQ9NYX4 CCND3-202ENST00000372988 2133 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
CALYQ9NYX4 FANCE-201ENST00000229769 2554 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CALYQ9NYX4 CYS1-201ENST00000381813 2738 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CALYQ9NYX4 UBE2E3-202ENST00000410062 1570 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CALYQ9NYX4 CAPNS1-216ENST00000628306 1389 ntTSL 5 BASIC19.41■□□□□ 0.7
CALYQ9NYX4 NPAS3-203ENST00000357798 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
CALYQ9NYX4 TSPAN4-203ENST00000397397 1423 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CALYQ9NYX4 ST3GAL5-214ENST00000638178 2034 ntTSL 5 BASIC19.41■□□□□ 0.7
CALYQ9NYX4 RAB20-201ENST00000267328 1518 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CALYQ9NYX4 MTERF3-204ENST00000523821 1529 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
CALYQ9NYX4 ZNF205-202ENST00000382192 2062 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CALYQ9NYX4 EED-207ENST00000528180 1745 ntTSL 5 BASIC19.4■□□□□ 0.7
CALYQ9NYX4 KCTD5-201ENST00000301738 2482 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CALYQ9NYX4 WNT11-201ENST00000322563 1930 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CALYQ9NYX4 RRAD-201ENST00000299759 1569 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CALYQ9NYX4 LSR-205ENST00000427250 1606 ntTSL 2 BASIC19.4■□□□□ 0.7
CALYQ9NYX4 RITA1-203ENST00000552495 1898 ntTSL 2 BASIC19.39■□□□□ 0.7
CALYQ9NYX4 NFKBIB-204ENST00000572515 1929 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
CALYQ9NYX4 FEZ2-203ENST00000379245 2097 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CALYQ9NYX4 MAP3K3-210ENST00000584573 2480 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 21.1 ms