Protein–RNA interactions for Protein: Q9NRJ3

CCL28, C-C motif chemokine 28, humanhuman

Predictions only

Length 127 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL28Q9NRJ3 FAM21EP-202ENST00000456967 2177 ntTSL 2 BASIC19.49■□□□□ 0.71
CCL28Q9NRJ3 CCNJL-201ENST00000257536 1848 ntAPPRIS P1 TSL 2 BASIC19.48■□□□□ 0.71
CCL28Q9NRJ3 C7orf25-206ENST00000447342 1823 ntTSL 2 BASIC19.48■□□□□ 0.71
CCL28Q9NRJ3 TM9SF3-201ENST00000371142 6141 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
CCL28Q9NRJ3 BAX-202ENST00000345358 793 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
CCL28Q9NRJ3 AL118558.1-203ENST00000553701 447 ntTSL 3 BASIC19.48■□□□□ 0.71
CCL28Q9NRJ3 CASK-201ENST00000378154 2494 ntTSL 5 BASIC19.48■□□□□ 0.71
CCL28Q9NRJ3 TXNRD2-201ENST00000334363 1893 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
CCL28Q9NRJ3 RUNX2-211ENST00000625924 1458 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
CCL28Q9NRJ3 ARG2-201ENST00000261783 2045 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
CCL28Q9NRJ3 TTLL11-202ENST00000373776 2012 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
CCL28Q9NRJ3 ARHGDIA-203ENST00000541078 1517 ntAPPRIS P1 TSL 3 BASIC19.47■□□□□ 0.71
CCL28Q9NRJ3 VPS53-211ENST00000571805 2356 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
CCL28Q9NRJ3 FAAP20-202ENST00000378546 729 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
CCL28Q9NRJ3 LINC01918-201ENST00000436841 797 ntTSL 2 BASIC19.47■□□□□ 0.71
CCL28Q9NRJ3 KLHL21-203ENST00000463043 667 ntTSL 5 BASIC19.47■□□□□ 0.71
CCL28Q9NRJ3 MOB2-207ENST00000614710 705 ntTSL 5 BASIC19.47■□□□□ 0.71
CCL28Q9NRJ3 GOLGA7-201ENST00000357743 2027 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
CCL28Q9NRJ3 ZBTB45-205ENST00000600990 2159 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
CCL28Q9NRJ3 GPR137-202ENST00000377702 1478 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
CCL28Q9NRJ3 TAZ-216ENST00000613002 1485 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
CCL28Q9NRJ3 LRRC24-201ENST00000529415 1758 ntAPPRIS P2 TSL 1 (best) BASIC19.47■□□□□ 0.71
CCL28Q9NRJ3 KLC3-202ENST00000470402 1820 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
CCL28Q9NRJ3 TMSB15B-202ENST00000436583 2186 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CCL28Q9NRJ3 UBALD2-201ENST00000327490 1593 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CCL28Q9NRJ3 AC141586.4-201ENST00000624558 1573 ntBASIC19.46■□□□□ 0.71
CCL28Q9NRJ3 FAM168B-201ENST00000389915 944 ntAPPRIS P1 TSL 3 BASIC19.46■□□□□ 0.71
CCL28Q9NRJ3 HSD17B12-202ENST00000395700 994 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
CCL28Q9NRJ3 LTC4S-205ENST00000486713 496 ntTSL 2 BASIC19.46■□□□□ 0.71
CCL28Q9NRJ3 AC025884.2-201ENST00000553429 711 ntBASIC19.46■□□□□ 0.71
CCL28Q9NRJ3 AC009041.3-201ENST00000564390 879 ntTSL 5 BASIC19.46■□□□□ 0.71
CCL28Q9NRJ3 C16orf95-205ENST00000567970 1031 ntAPPRIS ALT2 TSL 5 BASIC19.46■□□□□ 0.71
CCL28Q9NRJ3 TANGO2-204ENST00000401833 1920 ntTSL 5 BASIC19.46■□□□□ 0.71
CCL28Q9NRJ3 EHBP1L1-201ENST00000309295 5185 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CCL28Q9NRJ3 ATP5G2-208ENST00000552242 1950 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CCL28Q9NRJ3 IL15RA-214ENST00000525219 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
CCL28Q9NRJ3 TRAP1-202ENST00000538171 2052 ntTSL 2 BASIC19.45■□□□□ 0.7
CCL28Q9NRJ3 HSD11B2-201ENST00000326152 1900 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CCL28Q9NRJ3 LSM8-203ENST00000422760 1920 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
CCL28Q9NRJ3 INPP5J-206ENST00000404453 1613 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
CCL28Q9NRJ3 SMOX-201ENST00000278795 2164 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
CCL28Q9NRJ3 MDFIC-203ENST00000423503 474 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
CCL28Q9NRJ3 TTC39C-209ENST00000584250 1048 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
CCL28Q9NRJ3 GNB1-210ENST00000615252 3048 ntTSL 5 BASIC19.45■□□□□ 0.7
CCL28Q9NRJ3 AGAP3-201ENST00000335367 2675 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
CCL28Q9NRJ3 PTH1R-206ENST00000430002 1947 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CCL28Q9NRJ3 HORMAD2-201ENST00000336726 2187 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CCL28Q9NRJ3 PLEKHO1-202ENST00000369126 1809 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
CCL28Q9NRJ3 SYT7-202ENST00000535826 1621 ntTSL 5 BASIC19.44■□□□□ 0.7
CCL28Q9NRJ3 HEXDC-202ENST00000337014 2285 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
CCL28Q9NRJ3 GRK4-204ENST00000503518 2136 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
CCL28Q9NRJ3 AC187653.1-201ENST00000506382 702 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
CCL28Q9NRJ3 MIR3960-201ENST00000583311 91 ntBASIC19.44■□□□□ 0.7
CCL28Q9NRJ3 LTBP3-212ENST00000529189 1997 ntTSL 2 BASIC19.44■□□□□ 0.7
CCL28Q9NRJ3 ARL6IP4-211ENST00000454885 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
CCL28Q9NRJ3 ERF-201ENST00000222329 2698 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CCL28Q9NRJ3 KRT18-201ENST00000388835 1562 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CCL28Q9NRJ3 CLEC14A-201ENST00000342213 2267 ntAPPRIS P1 BASIC19.44■□□□□ 0.7
CCL28Q9NRJ3 RUNX2-210ENST00000576263 2256 ntTSL 5 BASIC19.44■□□□□ 0.7
CCL28Q9NRJ3 GNB2-203ENST00000393926 1641 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
CCL28Q9NRJ3 ARL2-SNX15-201ENST00000301886 2392 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
CCL28Q9NRJ3 NPHS2-202ENST00000367616 1670 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
CCL28Q9NRJ3 SLC35B2-204ENST00000537814 1715 ntTSL 2 BASIC19.43■□□□□ 0.7
CCL28Q9NRJ3 PANK2-201ENST00000316562 2280 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
CCL28Q9NRJ3 ESR2-202ENST00000341099 2060 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CCL28Q9NRJ3 CPOX-201ENST00000264193 2825 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CCL28Q9NRJ3 KLC1-205ENST00000380038 2322 ntTSL 2 BASIC19.42■□□□□ 0.7
CCL28Q9NRJ3 PPP2R2C-203ENST00000382599 1807 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CCL28Q9NRJ3 DOK3-205ENST00000501403 1872 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
CCL28Q9NRJ3 C16orf87-201ENST00000285697 1585 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CCL28Q9NRJ3 PARD6A-201ENST00000219255 1248 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
CCL28Q9NRJ3 AC060814.1-201ENST00000554326 538 ntBASIC19.42■□□□□ 0.7
CCL28Q9NRJ3 ANO8-204ENST00000630631 1905 ntTSL 5 BASIC19.42■□□□□ 0.7
CCL28Q9NRJ3 GNPTG-201ENST00000204679 1983 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CCL28Q9NRJ3 SMPD5-203ENST00000639008 1464 ntBASIC19.41■□□□□ 0.7
CCL28Q9NRJ3 DENND5A-201ENST00000328194 5031 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CCL28Q9NRJ3 CTSF-201ENST00000310325 2035 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CCL28Q9NRJ3 PCMT1-202ENST00000367380 1628 ntTSL 2 BASIC19.41■□□□□ 0.7
CCL28Q9NRJ3 PCMT1-211ENST00000544496 1628 ntTSL 2 BASIC19.41■□□□□ 0.7
CCL28Q9NRJ3 ST7-201ENST00000265437 2899 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
CCL28Q9NRJ3 GET4-201ENST00000265857 2090 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
CCL28Q9NRJ3 CCDC96-201ENST00000310085 2091 ntAPPRIS P1 BASIC19.41■□□□□ 0.7
CCL28Q9NRJ3 HSBP1L1-201ENST00000451882 771 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CCL28Q9NRJ3 PDCD2-209ENST00000542896 1082 ntTSL 2 BASIC19.41■□□□□ 0.7
CCL28Q9NRJ3 CCR10-201ENST00000332438 1773 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CCL28Q9NRJ3 FZD8-201ENST00000374694 4030 ntAPPRIS P1 BASIC19.41■□□□□ 0.7
CCL28Q9NRJ3 TMEM64-203ENST00000458549 4997 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CCL28Q9NRJ3 NSMCE4A-202ENST00000369023 1394 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CCL28Q9NRJ3 BMP6-201ENST00000283147 2780 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CCL28Q9NRJ3 AC133561.1-201ENST00000568600 2415 ntBASIC19.41■□□□□ 0.7
CCL28Q9NRJ3 CDK2AP1-201ENST00000261692 1625 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CCL28Q9NRJ3 NAGLU-201ENST00000225927 2544 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CCL28Q9NRJ3 SIAH2-201ENST00000312960 2517 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CCL28Q9NRJ3 MCCD1-201ENST00000376191 955 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CCL28Q9NRJ3 HSPB6-202ENST00000587965 711 ntTSL 2 BASIC19.4■□□□□ 0.7
CCL28Q9NRJ3 KLF15-201ENST00000296233 2574 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CCL28Q9NRJ3 CAPNS1-216ENST00000628306 1389 ntTSL 5 BASIC19.4■□□□□ 0.7
CCL28Q9NRJ3 SYT7-203ENST00000539008 2061 ntTSL 5 BASIC19.4■□□□□ 0.7
CCL28Q9NRJ3 NAT8L-202ENST00000423729 5870 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CCL28Q9NRJ3 CCDC154-201ENST00000389176 2212 ntAPPRIS P5 TSL 5 BASIC19.4■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 17 ms