Protein–RNA interactions for Protein: Q9NR12

PDLIM7, PDZ and LIM domain protein 7, humanhuman

Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7Q9NR12 SH2B1-205ENST00000538342 1532 ntTSL 2 BASIC26.74■■□□□ 1.87
PDLIM7Q9NR12 FSD1-201ENST00000221856 1831 ntAPPRIS P1 TSL 1 (best) BASIC26.74■■□□□ 1.87
PDLIM7Q9NR12 TSEN34-204ENST00000429671 1912 ntTSL 2 BASIC26.73■■□□□ 1.87
PDLIM7Q9NR12 MRAP2-201ENST00000257776 2153 ntAPPRIS P1 TSL 1 (best) BASIC26.73■■□□□ 1.87
PDLIM7Q9NR12 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC26.73■■□□□ 1.87
PDLIM7Q9NR12 HSBP1L1-201ENST00000451882 771 ntAPPRIS P1 TSL 1 (best) BASIC26.73■■□□□ 1.87
PDLIM7Q9NR12 EVA1C-201ENST00000300255 1998 ntAPPRIS P3 TSL 1 (best) BASIC26.72■■□□□ 1.87
PDLIM7Q9NR12 GATA4-209ENST00000622443 1982 ntTSL 5 BASIC26.72■■□□□ 1.87
PDLIM7Q9NR12 KRT18P10-201ENST00000388836 1287 ntBASIC26.72■■□□□ 1.87
PDLIM7Q9NR12 AL357078.1-201ENST00000448344 310 ntTSL 4 BASIC26.72■■□□□ 1.87
PDLIM7Q9NR12 NKIRAS2-209ENST00000479407 992 ntTSL 3 BASIC26.71■■□□□ 1.87
PDLIM7Q9NR12 AL117332.1-201ENST00000622628 974 ntBASIC26.71■■□□□ 1.87
PDLIM7Q9NR12 Z98883.1-202ENST00000635107 1289 ntTSL 5 BASIC26.71■■□□□ 1.87
PDLIM7Q9NR12 NEUROG3-201ENST00000242462 1376 ntAPPRIS P1 TSL 1 (best) BASIC26.71■■□□□ 1.87
PDLIM7Q9NR12 TAZ-213ENST00000601016 1889 ntTSL 1 (best) BASIC26.7■■□□□ 1.87
PDLIM7Q9NR12 ZNF263-204ENST00000573578 1636 ntTSL 5 BASIC26.7■■□□□ 1.86
PDLIM7Q9NR12 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC26.7■■□□□ 1.86
PDLIM7Q9NR12 GBX1-201ENST00000297537 1092 ntAPPRIS P1 TSL 1 (best) BASIC26.7■■□□□ 1.86
PDLIM7Q9NR12 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC26.7■■□□□ 1.86
PDLIM7Q9NR12 AC005837.3-201ENST00000612163 286 ntBASIC26.7■■□□□ 1.86
PDLIM7Q9NR12 UBALD2-201ENST00000327490 1593 ntAPPRIS P1 TSL 1 (best) BASIC26.7■■□□□ 1.86
PDLIM7Q9NR12 VRK2-202ENST00000412104 1916 ntTSL 1 (best) BASIC26.69■■□□□ 1.86
PDLIM7Q9NR12 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC26.69■■□□□ 1.86
PDLIM7Q9NR12 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC26.69■■□□□ 1.86
PDLIM7Q9NR12 FAM162B-201ENST00000368557 1036 ntAPPRIS P1 TSL 1 (best) BASIC26.69■■□□□ 1.86
PDLIM7Q9NR12 MTMR1-202ENST00000370390 2755 ntAPPRIS P1 TSL 1 (best) BASIC26.69■■□□□ 1.86
PDLIM7Q9NR12 IL15RA-209ENST00000397255 759 ntAPPRIS ALT2 TSL 5 BASIC26.69■■□□□ 1.86
PDLIM7Q9NR12 CLIC3-203ENST00000494426 1017 ntAPPRIS P1 TSL 1 (best) BASIC26.69■■□□□ 1.86
PDLIM7Q9NR12 IL15RA-216ENST00000530685 660 ntTSL 5 BASIC26.69■■□□□ 1.86
PDLIM7Q9NR12 NPB-202ENST00000573081 2154 ntAPPRIS ALT2 BASIC26.69■■□□□ 1.86
PDLIM7Q9NR12 CCKBR-201ENST00000334619 2121 ntAPPRIS P1 TSL 1 (best) BASIC26.69■■□□□ 1.86
PDLIM7Q9NR12 CLEC2L-201ENST00000422142 1359 ntAPPRIS P2 TSL 3 BASIC26.69■■□□□ 1.86
PDLIM7Q9NR12 TAZ-216ENST00000613002 1485 ntTSL 1 (best) BASIC26.68■■□□□ 1.86
PDLIM7Q9NR12 SERF1A-202ENST00000354833 1889 ntTSL 1 (best) BASIC26.68■■□□□ 1.86
PDLIM7Q9NR12 SERF1B-201ENST00000380750 1889 ntTSL 1 (best) BASIC26.68■■□□□ 1.86
PDLIM7Q9NR12 CTBP1-201ENST00000290921 2297 ntTSL 1 (best) BASIC26.68■■□□□ 1.86
PDLIM7Q9NR12 SNTB1-202ENST00000517992 2273 ntAPPRIS P1 TSL 1 (best) BASIC26.68■■□□□ 1.86
PDLIM7Q9NR12 PRELID1-201ENST00000303204 1261 ntAPPRIS P1 TSL 1 (best) BASIC26.68■■□□□ 1.86
PDLIM7Q9NR12 CHKA-202ENST00000356135 1755 ntAPPRIS ALT2 TSL 1 (best) BASIC26.68■■□□□ 1.86
PDLIM7Q9NR12 EPM2A-208ENST00000618445 1694 ntTSL 1 (best) BASIC26.67■■□□□ 1.86
PDLIM7Q9NR12 NAA30-203ENST00000555166 1294 ntAPPRIS ALT2 TSL 2 BASIC26.67■■□□□ 1.86
PDLIM7Q9NR12 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC26.67■■□□□ 1.86
PDLIM7Q9NR12 ZNF821-201ENST00000313565 1874 ntTSL 1 (best) BASIC26.67■■□□□ 1.86
PDLIM7Q9NR12 NXPH3-201ENST00000328741 2179 ntAPPRIS P1 TSL 1 (best) BASIC26.67■■□□□ 1.86
PDLIM7Q9NR12 SLC9A3R2-201ENST00000424542 2194 ntAPPRIS P1 TSL 1 (best) BASIC26.67■■□□□ 1.86
PDLIM7Q9NR12 WIPI2-204ENST00000404704 1663 ntTSL 5 BASIC26.66■■□□□ 1.86
PDLIM7Q9NR12 ATP6V0A2-209ENST00000613625 1620 ntTSL 1 (best) BASIC26.66■■□□□ 1.86
PDLIM7Q9NR12 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC26.66■■□□□ 1.86
PDLIM7Q9NR12 FAM228B-208ENST00000613899 1238 ntAPPRIS ALT2 TSL 1 (best) BASIC26.66■■□□□ 1.86
PDLIM7Q9NR12 CLDN15-201ENST00000308344 1370 ntAPPRIS P1 TSL 1 (best) BASIC26.66■■□□□ 1.86
PDLIM7Q9NR12 FEZ2-204ENST00000405912 1931 ntTSL 1 (best) BASIC26.66■■□□□ 1.86
PDLIM7Q9NR12 HMG20B-202ENST00000333651 1596 ntAPPRIS P1 TSL 1 (best) BASIC26.66■■□□□ 1.86
PDLIM7Q9NR12 FAM107B-205ENST00000378467 2374 ntAPPRIS P1 TSL 1 (best) BASIC26.65■■□□□ 1.86
PDLIM7Q9NR12 HES4-201ENST00000304952 899 ntAPPRIS P1 TSL 1 (best) BASIC26.65■■□□□ 1.86
PDLIM7Q9NR12 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC26.65■■□□□ 1.86
PDLIM7Q9NR12 AC096631.2-201ENST00000436136 790 ntBASIC26.65■■□□□ 1.86
PDLIM7Q9NR12 CHTF8-208ENST00000522091 863 ntTSL 2 BASIC26.65■■□□□ 1.86
PDLIM7Q9NR12 TOLLIP-208ENST00000527938 549 ntTSL 4 BASIC26.65■■□□□ 1.86
PDLIM7Q9NR12 MIR3621-201ENST00000580529 85 ntBASIC26.65■■□□□ 1.86
PDLIM7Q9NR12 CAPNS1-205ENST00000588780 1035 ntAPPRIS ALT2 TSL 5 BASIC26.65■■□□□ 1.86
PDLIM7Q9NR12 HIST1H2AL-201ENST00000613174 393 ntAPPRIS P1 BASIC26.65■■□□□ 1.86
PDLIM7Q9NR12 RHOF-203ENST00000537171 1485 ntTSL 1 (best) BASIC26.65■■□□□ 1.86
PDLIM7Q9NR12 LTB4R-202ENST00000396782 1627 ntAPPRIS P1 TSL 1 (best) BASIC26.65■■□□□ 1.86
PDLIM7Q9NR12 LINC00588-201ENST00000521663 1875 ntTSL 2 BASIC26.64■■□□□ 1.86
PDLIM7Q9NR12 ATPAF1-213ENST00000574428 1760 ntTSL 1 (best) BASIC26.64■■□□□ 1.86
PDLIM7Q9NR12 POLR2F-211ENST00000488684 564 ntTSL 2 BASIC26.64■■□□□ 1.86
PDLIM7Q9NR12 SRRM2-231ENST00000630499 1207 ntTSL 1 (best) BASIC26.64■■□□□ 1.86
PDLIM7Q9NR12 PPM1J-201ENST00000309276 1863 ntAPPRIS P1 TSL 1 (best) BASIC26.64■■□□□ 1.85
PDLIM7Q9NR12 PEX26-202ENST00000399744 1672 ntAPPRIS P1 TSL 1 (best) BASIC26.63■■□□□ 1.85
PDLIM7Q9NR12 C1QTNF1-206ENST00000579760 1672 ntAPPRIS P1 TSL 1 (best) BASIC26.63■■□□□ 1.85
PDLIM7Q9NR12 CCDC71L-201ENST00000315965 1575 ntAPPRIS ALT2 TSL 5 BASIC26.63■■□□□ 1.85
PDLIM7Q9NR12 DGAT1-201ENST00000332324 1473 ntTSL 5 BASIC26.63■■□□□ 1.85
PDLIM7Q9NR12 TWF2-201ENST00000305533 1718 ntAPPRIS P1 TSL 1 (best) BASIC26.63■■□□□ 1.85
PDLIM7Q9NR12 FOXB2-201ENST00000376708 1299 ntAPPRIS P1 BASIC26.63■■□□□ 1.85
PDLIM7Q9NR12 TMC6-218ENST00000591436 1155 ntTSL 1 (best) BASIC26.63■■□□□ 1.85
PDLIM7Q9NR12 KLHL26-202ENST00000595182 522 ntTSL 4 BASIC26.63■■□□□ 1.85
PDLIM7Q9NR12 CDK2AP1-201ENST00000261692 1625 ntAPPRIS P1 TSL 1 (best) BASIC26.62■■□□□ 1.85
PDLIM7Q9NR12 PRSS21-201ENST00000005995 1101 ntAPPRIS P1 TSL 1 (best) BASIC26.62■■□□□ 1.85
PDLIM7Q9NR12 AC011511.4-201ENST00000586529 1850 ntAPPRIS P1 TSL 5 BASIC26.62■■□□□ 1.85
PDLIM7Q9NR12 JMJD8-201ENST00000412368 2038 ntAPPRIS P2 TSL 1 (best) BASIC26.61■■□□□ 1.85
PDLIM7Q9NR12 PAIP1-208ENST00000514514 1603 ntTSL 5 BASIC26.61■■□□□ 1.85
PDLIM7Q9NR12 SRP68-202ENST00000539137 2386 ntTSL 2 BASIC26.61■■□□□ 1.85
PDLIM7Q9NR12 GDF6-202ENST00000620978 973 ntTSL 1 (best) BASIC26.61■■□□□ 1.85
PDLIM7Q9NR12 LRRC61-205ENST00000493307 1456 ntAPPRIS P1 TSL 5 BASIC26.61■■□□□ 1.85
PDLIM7Q9NR12 ERN1-208ENST00000606895 2068 ntBASIC26.61■■□□□ 1.85
PDLIM7Q9NR12 RFLNA-205ENST00000546355 2354 ntAPPRIS ALT1 TSL 1 (best) BASIC26.61■■□□□ 1.85
PDLIM7Q9NR12 P2RX4-203ENST00000359949 1836 ntTSL 5 BASIC26.6■■□□□ 1.85
PDLIM7Q9NR12 RNF225-201ENST00000601382 990 ntAPPRIS P1 BASIC26.6■■□□□ 1.85
PDLIM7Q9NR12 AC010997.5-201ENST00000609182 354 ntBASIC26.6■■□□□ 1.85
PDLIM7Q9NR12 ZNF692-201ENST00000306601 1931 ntAPPRIS P3 TSL 1 (best) BASIC26.6■■□□□ 1.85
PDLIM7Q9NR12 IFNL4-201ENST00000606380 1637 ntAPPRIS P5 TSL 1 (best) BASIC26.6■■□□□ 1.85
PDLIM7Q9NR12 SLC25A1-202ENST00000451283 1514 ntTSL 2 BASIC26.6■■□□□ 1.85
PDLIM7Q9NR12 RDH14-201ENST00000381249 1587 ntAPPRIS P1 TSL 1 (best) BASIC26.59■■□□□ 1.85
PDLIM7Q9NR12 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC26.59■■□□□ 1.85
PDLIM7Q9NR12 SLC52A2-208ENST00000527078 1790 ntAPPRIS P1 TSL 5 BASIC26.59■■□□□ 1.85
PDLIM7Q9NR12 MIR4281-201ENST00000580852 62 ntBASIC26.59■■□□□ 1.85
PDLIM7Q9NR12 MIR4466-201ENST00000606121 54 ntBASIC26.59■■□□□ 1.85
PDLIM7Q9NR12 MIR6724-1-201ENST00000616420 92 ntBASIC26.59■■□□□ 1.85
PDLIM7Q9NR12 MIR6724-2-201ENST00000616483 92 ntBASIC26.59■■□□□ 1.85
PDLIM7Q9NR12 MIR6724-4-201ENST00000617390 92 ntBASIC26.59■■□□□ 1.85
Retrieved 100 of 98,524 protein–RNA pairs in 22.9 ms