Protein–RNA interactions for Protein: Q9NQ03

SCRT2, Transcriptional repressor scratch 2, humanhuman

Predictions only

Length 307 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCRT2Q9NQ03 BRD4-212ENST00000630599 726 ntTSL 2 BASIC17.45■□□□□ 0.38
SCRT2Q9NQ03 OSBPL5-208ENST00000478260 2653 ntTSL 2 BASIC17.45■□□□□ 0.38
SCRT2Q9NQ03 PSPH-201ENST00000275605 2131 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
SCRT2Q9NQ03 RANBP10-206ENST00000602677 2374 ntTSL 5 BASIC17.45■□□□□ 0.38
SCRT2Q9NQ03 AP003733.4-201ENST00000623785 1697 ntBASIC17.45■□□□□ 0.38
SCRT2Q9NQ03 NFKBIB-204ENST00000572515 1929 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
SCRT2Q9NQ03 PHYH-201ENST00000263038 1577 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
SCRT2Q9NQ03 E2F5-202ENST00000416274 1728 ntAPPRIS P4 TSL 1 (best) BASIC17.44■□□□□ 0.38
SCRT2Q9NQ03 CHODL-201ENST00000299295 2548 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
SCRT2Q9NQ03 TST-202ENST00000403892 1797 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
SCRT2Q9NQ03 SH2B1-205ENST00000538342 1532 ntTSL 2 BASIC17.44■□□□□ 0.38
SCRT2Q9NQ03 DUX4L11-201ENST00000611504 1267 ntBASIC17.44■□□□□ 0.38
SCRT2Q9NQ03 DUX4L12-201ENST00000614593 1267 ntBASIC17.44■□□□□ 0.38
SCRT2Q9NQ03 DUX4L14-201ENST00000621227 1267 ntBASIC17.44■□□□□ 0.38
SCRT2Q9NQ03 WDR86-204ENST00000477459 1428 ntTSL 2 BASIC17.44■□□□□ 0.38
SCRT2Q9NQ03 RUNX1-205ENST00000399240 1590 ntTSL 3 BASIC17.44■□□□□ 0.38
SCRT2Q9NQ03 SUGCT-209ENST00000628514 1591 ntAPPRIS P4 TSL 1 (best) BASIC17.44■□□□□ 0.38
SCRT2Q9NQ03 PBX1-202ENST00000367897 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC17.44■□□□□ 0.38
SCRT2Q9NQ03 FAM193A-211ENST00000637812 4885 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
SCRT2Q9NQ03 SCARA5-204ENST00000524352 1945 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
SCRT2Q9NQ03 CENPV-201ENST00000299736 1165 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
SCRT2Q9NQ03 TIMM29-201ENST00000270502 1425 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
SCRT2Q9NQ03 RCC2-201ENST00000375433 2030 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
SCRT2Q9NQ03 FBXW5-201ENST00000325285 2274 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
SCRT2Q9NQ03 HYAL2-207ENST00000442581 2318 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
SCRT2Q9NQ03 SLC35B2-202ENST00000393812 2043 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
SCRT2Q9NQ03 SLC22A31-206ENST00000614943 1860 ntTSL 5 BASIC17.42■□□□□ 0.38
SCRT2Q9NQ03 SLC35D3-201ENST00000331858 2359 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
SCRT2Q9NQ03 TMEM259-202ENST00000356663 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
SCRT2Q9NQ03 TM6SF1-204ENST00000379390 1638 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
SCRT2Q9NQ03 HDGFL2-210ENST00000621835 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
SCRT2Q9NQ03 PCYT2-204ENST00000570388 1474 ntTSL 2 BASIC17.42■□□□□ 0.38
SCRT2Q9NQ03 AMER2-202ENST00000515384 3197 ntAPPRIS P1 BASIC17.42■□□□□ 0.38
SCRT2Q9NQ03 SCN1B-201ENST00000262631 1670 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
SCRT2Q9NQ03 AC097639.1-201ENST00000565519 1891 ntBASIC17.41■□□□□ 0.38
SCRT2Q9NQ03 C1QTNF5-202ENST00000528368 1356 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
SCRT2Q9NQ03 TMEM203-201ENST00000343666 1557 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
SCRT2Q9NQ03 RANBP1-202ENST00000402752 1132 ntAPPRIS ALT1 TSL 1 (best) BASIC17.41■□□□□ 0.38
SCRT2Q9NQ03 HES6-205ENST00000409356 528 ntTSL 2 BASIC17.41■□□□□ 0.38
SCRT2Q9NQ03 MED25-210ENST00000612854 801 ntTSL 5 BASIC17.41■□□□□ 0.38
SCRT2Q9NQ03 MED25-213ENST00000620467 1293 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
SCRT2Q9NQ03 MED25-214ENST00000622402 642 ntTSL 5 BASIC17.41■□□□□ 0.38
SCRT2Q9NQ03 TNFSF12-TNFSF13-201ENST00000293826 1816 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
SCRT2Q9NQ03 TMIE-201ENST00000326431 1824 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
SCRT2Q9NQ03 GJC1-209ENST00000592524 1837 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
SCRT2Q9NQ03 PHACTR2-208ENST00000440869 2569 ntAPPRIS ALT2 TSL 2 BASIC17.41■□□□□ 0.38
SCRT2Q9NQ03 ZNF205-202ENST00000382192 2062 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
SCRT2Q9NQ03 SLC25A42-201ENST00000318596 3120 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
SCRT2Q9NQ03 S1PR4-201ENST00000246115 1565 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
SCRT2Q9NQ03 ZBTB45-205ENST00000600990 2159 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
SCRT2Q9NQ03 TRAP1-202ENST00000538171 2052 ntTSL 2 BASIC17.4■□□□□ 0.38
SCRT2Q9NQ03 CTXN1-201ENST00000318978 1274 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
SCRT2Q9NQ03 AL118558.1-203ENST00000553701 447 ntTSL 3 BASIC17.4■□□□□ 0.38
SCRT2Q9NQ03 COPZ2-210ENST00000621465 895 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
SCRT2Q9NQ03 AC092902.2-221ENST00000628476 965 ntTSL 5 BASIC17.4■□□□□ 0.38
SCRT2Q9NQ03 PLEKHA8-202ENST00000396257 1907 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
SCRT2Q9NQ03 GAL3ST2-201ENST00000192314 1370 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
SCRT2Q9NQ03 RITA1-203ENST00000552495 1898 ntTSL 2 BASIC17.39■□□□□ 0.38
SCRT2Q9NQ03 USF3-203ENST00000491165 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.38
SCRT2Q9NQ03 LY6K-201ENST00000292430 2671 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
SCRT2Q9NQ03 ADAD2-202ENST00000315906 1995 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
SCRT2Q9NQ03 CDR2-201ENST00000268383 2702 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
SCRT2Q9NQ03 AURKAIP1-203ENST00000338370 1072 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
SCRT2Q9NQ03 ARHGAP27-207ENST00000528273 2319 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
SCRT2Q9NQ03 ARX-201ENST00000379044 2876 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
SCRT2Q9NQ03 PTOV1-201ENST00000391842 1875 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
SCRT2Q9NQ03 UBTD1-201ENST00000370664 1706 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
SCRT2Q9NQ03 SLC6A10P-202ENST00000431994 2058 ntBASIC17.38■□□□□ 0.37
SCRT2Q9NQ03 BBC3-203ENST00000439096 1838 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
SCRT2Q9NQ03 MAGI2-208ENST00000522391 4878 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
SCRT2Q9NQ03 AFDN-AS1-201ENST00000359760 2238 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
SCRT2Q9NQ03 MACF1-219ENST00000484793 834 ntTSL 2 BASIC17.38■□□□□ 0.37
SCRT2Q9NQ03 R3HDM4-208ENST00000626716 138 ntTSL 5 BASIC17.38■□□□□ 0.37
SCRT2Q9NQ03 TRIM3-201ENST00000345851 2879 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
SCRT2Q9NQ03 ECEL1-202ENST00000409941 2322 ntAPPRIS ALT1 TSL 1 (best) BASIC17.38■□□□□ 0.37
SCRT2Q9NQ03 BSCL2-205ENST00000403550 1693 ntAPPRIS P3 TSL 5 BASIC17.38■□□□□ 0.37
SCRT2Q9NQ03 SSTR5-201ENST00000293897 1362 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
SCRT2Q9NQ03 CACNA1H-210ENST00000638323 8048 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
SCRT2Q9NQ03 DCUN1D2-208ENST00000478244 2045 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
SCRT2Q9NQ03 ING2-201ENST00000302327 1189 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
SCRT2Q9NQ03 AL024507.2-201ENST00000606070 2574 ntBASIC17.37■□□□□ 0.37
SCRT2Q9NQ03 MSX2-201ENST00000239243 2241 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
SCRT2Q9NQ03 PROCA1-201ENST00000301039 1566 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
SCRT2Q9NQ03 CCDC71L-201ENST00000315965 1575 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
SCRT2Q9NQ03 LSR-202ENST00000354900 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
SCRT2Q9NQ03 LINC01124-201ENST00000409786 2117 ntBASIC17.36■□□□□ 0.37
SCRT2Q9NQ03 GRM6-202ENST00000517717 2673 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
SCRT2Q9NQ03 ITGB3-202ENST00000571680 1668 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
SCRT2Q9NQ03 LDB1-201ENST00000361198 2285 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
SCRT2Q9NQ03 AGTR1-203ENST00000404754 2252 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
SCRT2Q9NQ03 FOXO1-201ENST00000379561 5735 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
SCRT2Q9NQ03 R3HDM4-201ENST00000361574 1815 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
SCRT2Q9NQ03 IQANK1-201ENST00000527139 1803 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
SCRT2Q9NQ03 GADD45G-201ENST00000252506 1065 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
SCRT2Q9NQ03 MAP4K3-211ENST00000484274 407 ntTSL 2 BASIC17.36■□□□□ 0.37
SCRT2Q9NQ03 ONECUT3-201ENST00000382349 8318 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
SCRT2Q9NQ03 UXS1-201ENST00000283148 2099 ntAPPRIS ALT1 TSL 2 BASIC17.36■□□□□ 0.37
SCRT2Q9NQ03 LTK-202ENST00000355166 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
SCRT2Q9NQ03 TSEN34-201ENST00000302937 2294 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
SCRT2Q9NQ03 KRT18-201ENST00000388835 1562 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 14.7 ms