Protein–RNA interactions for Protein: Q9HD20

ATP13A1, Manganese-transporting ATPase 13A1, humanhuman

Predictions only

Length 1,204 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP13A1Q9HD20 FP236240.1-201ENST00000619537 1116 ntAPPRIS P1 TSL 1 (best) BASIC24.23■■□□□ 1.47
ATP13A1Q9HD20 FBXO7-206ENST00000452138 1535 ntTSL 2 BASIC24.23■■□□□ 1.47
ATP13A1Q9HD20 GNB2-203ENST00000393926 1641 ntAPPRIS P1 TSL 5 BASIC24.23■■□□□ 1.47
ATP13A1Q9HD20 CCR10-201ENST00000332438 1773 ntAPPRIS P1 TSL 1 (best) BASIC24.23■■□□□ 1.47
ATP13A1Q9HD20 C8orf58-206ENST00000614574 1955 ntAPPRIS ALT2 TSL 5 BASIC24.23■■□□□ 1.47
ATP13A1Q9HD20 GCLC-209ENST00000514004 2356 ntTSL 1 (best) BASIC24.22■■□□□ 1.47
ATP13A1Q9HD20 PLEKHO1-202ENST00000369126 1809 ntTSL 1 (best) BASIC24.22■■□□□ 1.47
ATP13A1Q9HD20 FKBP8-213ENST00000608443 1849 ntAPPRIS P3 TSL 1 (best) BASIC24.22■■□□□ 1.47
ATP13A1Q9HD20 SLC35A2-209ENST00000452555 1563 ntTSL 2 BASIC24.22■■□□□ 1.47
ATP13A1Q9HD20 HOXB3-202ENST00000460160 1525 ntTSL 5 BASIC24.22■■□□□ 1.47
ATP13A1Q9HD20 CAPNS1-216ENST00000628306 1389 ntTSL 5 BASIC24.22■■□□□ 1.47
ATP13A1Q9HD20 CARNMT1-201ENST00000376830 1012 ntTSL 1 (best) BASIC24.22■■□□□ 1.47
ATP13A1Q9HD20 YPEL1-202ENST00000403503 466 ntTSL 3 BASIC24.22■■□□□ 1.47
ATP13A1Q9HD20 PTRH1-208ENST00000543175 814 ntAPPRIS P1 TSL 1 (best) BASIC24.22■■□□□ 1.47
ATP13A1Q9HD20 OSBP-201ENST00000263847 5083 ntAPPRIS P1 TSL 1 (best) BASIC24.22■■□□□ 1.47
ATP13A1Q9HD20 CAPZB-203ENST00000375142 1686 ntAPPRIS ALT1 TSL 5 BASIC24.21■■□□□ 1.47
ATP13A1Q9HD20 GDF1-201ENST00000247005 2517 ntAPPRIS P1 TSL 1 (best) BASIC24.21■■□□□ 1.47
ATP13A1Q9HD20 CERS1-204ENST00000623882 2517 ntTSL 1 (best) BASIC24.21■■□□□ 1.47
ATP13A1Q9HD20 PCYT2-203ENST00000538936 5147 ntTSL 1 (best) BASIC24.21■■□□□ 1.47
ATP13A1Q9HD20 IGFBP6-201ENST00000301464 1169 ntAPPRIS P2 TSL 1 (best) BASIC24.21■■□□□ 1.47
ATP13A1Q9HD20 TSPAN10-204ENST00000611590 1068 ntAPPRIS ALT2 TSL 1 (best) BASIC24.21■■□□□ 1.47
ATP13A1Q9HD20 SIX2-201ENST00000303077 2205 ntAPPRIS P1 TSL 1 (best) BASIC24.2■■□□□ 1.47
ATP13A1Q9HD20 SLC25A1-202ENST00000451283 1514 ntTSL 2 BASIC24.2■■□□□ 1.47
ATP13A1Q9HD20 BTBD6-205ENST00000536364 1973 ntAPPRIS P2 TSL 5 BASIC24.2■■□□□ 1.46
ATP13A1Q9HD20 MROH6-210ENST00000533679 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC24.2■■□□□ 1.46
ATP13A1Q9HD20 EGFL8-219ENST00000333845 1310 ntAPPRIS P1 TSL 1 (best) BASIC24.2■■□□□ 1.46
ATP13A1Q9HD20 SDHAF1-201ENST00000378887 1117 ntAPPRIS P1 BASIC24.2■■□□□ 1.46
ATP13A1Q9HD20 AL592295.1-201ENST00000400984 884 ntBASIC24.2■■□□□ 1.46
ATP13A1Q9HD20 AC022616.5-201ENST00000518796 181 ntBASIC24.2■■□□□ 1.46
ATP13A1Q9HD20 KAT8-202ENST00000448516 1789 ntTSL 1 (best) BASIC24.2■■□□□ 1.46
ATP13A1Q9HD20 SAC3D1-201ENST00000398846 1566 ntAPPRIS P1 TSL 1 (best) BASIC24.2■■□□□ 1.46
ATP13A1Q9HD20 RAB20-201ENST00000267328 1518 ntAPPRIS P1 TSL 1 (best) BASIC24.2■■□□□ 1.46
ATP13A1Q9HD20 FOXO3B-201ENST00000395675 1928 ntBASIC24.2■■□□□ 1.46
ATP13A1Q9HD20 C1orf232-201ENST00000634842 643 ntAPPRIS P5 TSL 5 BASIC24.19■■□□□ 1.46
ATP13A1Q9HD20 KLC1-203ENST00000347839 2271 ntTSL 5 BASIC24.19■■□□□ 1.46
ATP13A1Q9HD20 BCKDHB-202ENST00000356489 1514 ntAPPRIS P1 TSL 1 (best) BASIC24.19■■□□□ 1.46
ATP13A1Q9HD20 SH3GL1-201ENST00000269886 2516 ntAPPRIS P1 TSL 1 (best) BASIC24.19■■□□□ 1.46
ATP13A1Q9HD20 HSF1-204ENST00000528838 2142 ntAPPRIS P1 TSL 1 (best) BASIC24.19■■□□□ 1.46
ATP13A1Q9HD20 HAS1-205ENST00000601714 2086 ntTSL 1 (best) BASIC24.19■■□□□ 1.46
ATP13A1Q9HD20 EPB41L4B-202ENST00000374566 5800 ntAPPRIS P4 TSL 1 (best) BASIC24.18■■□□□ 1.46
ATP13A1Q9HD20 HOMER3-201ENST00000221222 1384 ntAPPRIS ALT1 TSL 5 BASIC24.18■■□□□ 1.46
ATP13A1Q9HD20 CST6-201ENST00000312134 759 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
ATP13A1Q9HD20 TMEM104-205ENST00000582773 1740 ntTSL 2 BASIC24.18■■□□□ 1.46
ATP13A1Q9HD20 PTPMT1-205ENST00000534775 1611 ntTSL 1 (best) BASIC24.17■■□□□ 1.46
ATP13A1Q9HD20 TRIM14-203ENST00000375098 1792 ntAPPRIS P1 TSL 2 BASIC24.17■■□□□ 1.46
ATP13A1Q9HD20 AC103724.3-201ENST00000564481 992 ntBASIC24.17■■□□□ 1.46
ATP13A1Q9HD20 TSPAN4-203ENST00000397397 1423 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
ATP13A1Q9HD20 SPG21-201ENST00000204566 1822 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
ATP13A1Q9HD20 RRP9-201ENST00000232888 1578 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
ATP13A1Q9HD20 FCRLB-205ENST00000367948 1977 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
ATP13A1Q9HD20 KLHDC9-203ENST00000392192 1333 ntTSL 1 (best) BASIC24.16■■□□□ 1.46
ATP13A1Q9HD20 ARRB2-210ENST00000572457 1660 ntTSL 5 BASIC24.16■■□□□ 1.46
ATP13A1Q9HD20 AL355490.1-201ENST00000445808 805 ntTSL 3 BASIC24.16■■□□□ 1.46
ATP13A1Q9HD20 TMPO-AS1-201ENST00000546421 738 ntTSL 5 BASIC24.16■■□□□ 1.46
ATP13A1Q9HD20 AC010913.1-201ENST00000608612 420 ntTSL 2 BASIC24.16■■□□□ 1.46
ATP13A1Q9HD20 GPR160-201ENST00000355897 2039 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
ATP13A1Q9HD20 SDS-201ENST00000257549 1606 ntAPPRIS P1 TSL 2 BASIC24.16■■□□□ 1.46
ATP13A1Q9HD20 NFU1-203ENST00000410022 1467 ntAPPRIS P3 TSL 1 (best) BASIC24.15■■□□□ 1.46
ATP13A1Q9HD20 HMCES-204ENST00000502878 1952 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
ATP13A1Q9HD20 CFAP77-202ENST00000393215 901 ntAPPRIS ALT2 TSL 5 BASIC24.15■■□□□ 1.46
ATP13A1Q9HD20 AL121906.1-201ENST00000606866 440 ntTSL 3 BASIC24.15■■□□□ 1.46
ATP13A1Q9HD20 REXO4-202ENST00000371942 2360 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
ATP13A1Q9HD20 CEBPA-AS1-201ENST00000592982 2198 ntBASIC24.15■■□□□ 1.46
ATP13A1Q9HD20 HNRNPL-201ENST00000221419 2471 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
ATP13A1Q9HD20 CITED4-201ENST00000372638 1316 ntAPPRIS P1 BASIC24.14■■□□□ 1.46
ATP13A1Q9HD20 HNRNPD-203ENST00000353341 1585 ntAPPRIS ALT1 TSL 1 (best) BASIC24.14■■□□□ 1.45
ATP13A1Q9HD20 AL590094.1-201ENST00000635581 706 ntTSL 2 BASIC24.14■■□□□ 1.45
ATP13A1Q9HD20 NPHS2-202ENST00000367616 1670 ntTSL 1 (best) BASIC24.14■■□□□ 1.45
ATP13A1Q9HD20 FAM162B-201ENST00000368557 1036 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
ATP13A1Q9HD20 AC064853.4-201ENST00000641394 363 ntAPPRIS P1 BASIC24.13■■□□□ 1.45
ATP13A1Q9HD20 CLEC2L-201ENST00000422142 1359 ntAPPRIS P2 TSL 3 BASIC24.13■■□□□ 1.45
ATP13A1Q9HD20 R3HCC1-202ENST00000411463 1467 ntAPPRIS P5 TSL 5 BASIC24.13■■□□□ 1.45
ATP13A1Q9HD20 ZNF74-204ENST00000405993 1839 ntAPPRIS ALT2 TSL 5 BASIC24.12■■□□□ 1.45
ATP13A1Q9HD20 TMEM221-201ENST00000341130 1930 ntAPPRIS P1 TSL 2 BASIC24.12■■□□□ 1.45
ATP13A1Q9HD20 TMUB1-203ENST00000462940 1549 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
ATP13A1Q9HD20 EPM2A-202ENST00000435470 1278 ntTSL 1 (best) BASIC24.12■■□□□ 1.45
ATP13A1Q9HD20 AL031848.2-201ENST00000607670 837 ntBASIC24.12■■□□□ 1.45
ATP13A1Q9HD20 ATG16L2-201ENST00000321297 2243 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
ATP13A1Q9HD20 PDIA6-201ENST00000272227 2338 ntAPPRIS P3 TSL 1 (best) BASIC24.12■■□□□ 1.45
ATP13A1Q9HD20 HOXA4-204ENST00000610970 1728 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
ATP13A1Q9HD20 TPI1-210ENST00000613953 1460 ntTSL 1 (best) BASIC24.12■■□□□ 1.45
ATP13A1Q9HD20 RRAD-201ENST00000299759 1569 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
ATP13A1Q9HD20 HAS2-AS1-201ENST00000514180 1656 ntTSL 1 (best) BASIC24.11■■□□□ 1.45
ATP13A1Q9HD20 RING1-201ENST00000374656 1752 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
ATP13A1Q9HD20 SERP2-201ENST00000379179 784 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
ATP13A1Q9HD20 MMP25-AS1-209ENST00000576250 779 ntTSL 5 BASIC24.11■■□□□ 1.45
ATP13A1Q9HD20 TSPAN4-202ENST00000397396 1332 ntTSL 5 BASIC24.1■■□□□ 1.45
ATP13A1Q9HD20 RBM33-201ENST00000287912 1404 ntTSL 2 BASIC24.1■■□□□ 1.45
ATP13A1Q9HD20 PDSS1-201ENST00000376215 1626 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
ATP13A1Q9HD20 RFLNA-202ENST00000338359 652 ntAPPRIS P2 TSL 1 (best) BASIC24.1■■□□□ 1.45
ATP13A1Q9HD20 AC011448.1-201ENST00000555938 1100 ntAPPRIS P1 TSL 2 BASIC24.1■■□□□ 1.45
ATP13A1Q9HD20 ARHGEF35-201ENST00000378115 2431 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
ATP13A1Q9HD20 SPIRE2-205ENST00000563972 1823 ntTSL 1 (best) BASIC24.1■■□□□ 1.45
ATP13A1Q9HD20 MRPL4-207ENST00000590669 1423 ntTSL 1 (best) BASIC24.1■■□□□ 1.45
ATP13A1Q9HD20 LURAP1L-201ENST00000319264 1753 ntAPPRIS P1 TSL 1 (best) BASIC24.09■■□□□ 1.45
ATP13A1Q9HD20 FAM118A-205ENST00000441876 1776 ntAPPRIS P1 TSL 1 (best) BASIC24.09■■□□□ 1.45
ATP13A1Q9HD20 AC078883.1-201ENST00000442417 950 ntTSL 3 BASIC24.09■■□□□ 1.45
ATP13A1Q9HD20 AL451085.2-201ENST00000605085 799 ntBASIC24.09■■□□□ 1.45
ATP13A1Q9HD20 NDUFA10-204ENST00000407129 699 ntTSL 1 (best) BASIC24.08■■□□□ 1.45
ATP13A1Q9HD20 THA1P-201ENST00000590384 1145 ntBASIC24.08■■□□□ 1.45
Retrieved 100 of 98,524 protein–RNA pairs in 48.3 ms