Protein–RNA interactions for Protein: Q9HC52

CBX8, Chromobox protein homolog 8, humanhuman

Predictions only

Length 389 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CBX8Q9HC52 CTXN1-201ENST00000318978 1274 ntAPPRIS P1 TSL 1 (best) BASIC26.41■■□□□ 1.82
CBX8Q9HC52 C7orf25-206ENST00000447342 1823 ntTSL 2 BASIC26.41■■□□□ 1.82
CBX8Q9HC52 AFDN-201ENST00000344191 5249 ntTSL 5 BASIC26.41■■□□□ 1.82
CBX8Q9HC52 TRIM14-203ENST00000375098 1792 ntAPPRIS P1 TSL 2 BASIC26.41■■□□□ 1.82
CBX8Q9HC52 RARA-204ENST00000394089 2024 ntAPPRIS P1 TSL 2 BASIC26.4■■□□□ 1.82
CBX8Q9HC52 HES6-205ENST00000409356 528 ntTSL 2 BASIC26.4■■□□□ 1.82
CBX8Q9HC52 WNT5A-AS1-201ENST00000469484 500 ntTSL 3 BASIC26.4■■□□□ 1.82
CBX8Q9HC52 HOXD9-201ENST00000249499 1870 ntAPPRIS P1 TSL 1 (best) BASIC26.4■■□□□ 1.82
CBX8Q9HC52 AMZ2P1-201ENST00000397713 2259 ntTSL 1 (best) BASIC26.39■■□□□ 1.82
CBX8Q9HC52 RNF223-201ENST00000453464 1902 ntAPPRIS P1 TSL 2 BASIC26.39■■□□□ 1.81
CBX8Q9HC52 CDH23-206ENST00000398842 1759 ntTSL 5 BASIC26.38■■□□□ 1.81
CBX8Q9HC52 TANGO2-204ENST00000401833 1920 ntTSL 5 BASIC26.38■■□□□ 1.81
CBX8Q9HC52 REPIN1-204ENST00000466559 1022 ntTSL 1 (best) BASIC26.38■■□□□ 1.81
CBX8Q9HC52 PQLC3-204ENST00000441908 1784 ntTSL 2 BASIC26.38■■□□□ 1.81
CBX8Q9HC52 HRH3-202ENST00000340177 2659 ntAPPRIS P2 TSL 1 (best) BASIC26.37■■□□□ 1.81
CBX8Q9HC52 DLG3-203ENST00000374360 5905 ntAPPRIS P2 TSL 1 (best) BASIC26.37■■□□□ 1.81
CBX8Q9HC52 C3orf80-201ENST00000326474 2718 ntAPPRIS P1 BASIC26.37■■□□□ 1.81
CBX8Q9HC52 ANKRD20A11P-201ENST00000344693 1088 ntTSL 1 (best) BASIC26.37■■□□□ 1.81
CBX8Q9HC52 PABPC1L2B-AS1-201ENST00000416989 1167 ntTSL 3 BASIC26.37■■□□□ 1.81
CBX8Q9HC52 AL662864.1-201ENST00000454388 1167 ntTSL 3 BASIC26.37■■□□□ 1.81
CBX8Q9HC52 MAP4K3-211ENST00000484274 407 ntTSL 2 BASIC26.37■■□□□ 1.81
CBX8Q9HC52 ABCB10P4-201ENST00000566803 2184 ntBASIC26.37■■□□□ 1.81
CBX8Q9HC52 PTH1R-207ENST00000449590 2123 ntAPPRIS P1 TSL 1 (best) BASIC26.36■■□□□ 1.81
CBX8Q9HC52 STRBP-202ENST00000360998 2990 ntTSL 1 (best) BASIC26.36■■□□□ 1.81
CBX8Q9HC52 PEBP1-201ENST00000261313 1697 ntAPPRIS P1 TSL 1 (best) BASIC26.36■■□□□ 1.81
CBX8Q9HC52 PTH1R-206ENST00000430002 1947 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
CBX8Q9HC52 HOXC9-201ENST00000303450 1516 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
CBX8Q9HC52 PLEKHO1-202ENST00000369126 1809 ntTSL 1 (best) BASIC26.35■■□□□ 1.81
CBX8Q9HC52 ING2-201ENST00000302327 1189 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
CBX8Q9HC52 ARSB-202ENST00000396151 2316 ntTSL 1 (best) BASIC26.35■■□□□ 1.81
CBX8Q9HC52 AC092902.2-221ENST00000628476 965 ntTSL 5 BASIC26.35■■□□□ 1.81
CBX8Q9HC52 ME2-208ENST00000638937 2471 ntTSL 5 BASIC26.35■■□□□ 1.81
CBX8Q9HC52 KAT5-208ENST00000530446 1697 ntTSL 1 (best) BASIC26.34■■□□□ 1.81
CBX8Q9HC52 BFSP1-202ENST00000377873 2207 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
CBX8Q9HC52 TCF3-203ENST00000395423 2779 ntTSL 5 BASIC26.34■■□□□ 1.81
CBX8Q9HC52 DACT3-202ENST00000391916 2834 ntAPPRIS P1 TSL 5 BASIC26.34■■□□□ 1.81
CBX8Q9HC52 FZD8-201ENST00000374694 4030 ntAPPRIS P1 BASIC26.33■■□□□ 1.81
CBX8Q9HC52 MACROD1-201ENST00000255681 1205 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.81
CBX8Q9HC52 POLE2-201ENST00000216367 1776 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.8
CBX8Q9HC52 CAPNS1-216ENST00000628306 1389 ntTSL 5 BASIC26.33■■□□□ 1.8
CBX8Q9HC52 FAM86JP-203ENST00000485843 2012 ntTSL 1 (best) BASIC26.32■■□□□ 1.8
CBX8Q9HC52 HSD17B1-201ENST00000225929 1265 ntAPPRIS ALT2 TSL 2 BASIC26.32■■□□□ 1.8
CBX8Q9HC52 ZNF706-207ENST00000519882 959 ntAPPRIS P1 TSL 3 BASIC26.32■■□□□ 1.8
CBX8Q9HC52 ZNF706-213ENST00000521272 732 ntAPPRIS P1 TSL 5 BASIC26.32■■□□□ 1.8
CBX8Q9HC52 HOMER2-201ENST00000304231 1990 ntAPPRIS P4 TSL 5 BASIC26.32■■□□□ 1.8
CBX8Q9HC52 PSPH-201ENST00000275605 2131 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
CBX8Q9HC52 LSR-205ENST00000427250 1606 ntTSL 2 BASIC26.32■■□□□ 1.8
CBX8Q9HC52 ST3GAL5-214ENST00000638178 2034 ntTSL 5 BASIC26.31■■□□□ 1.8
CBX8Q9HC52 PVT1-212ENST00000521951 1535 ntTSL 1 (best) BASIC26.31■■□□□ 1.8
CBX8Q9HC52 NPHS2-202ENST00000367616 1670 ntTSL 1 (best) BASIC26.31■■□□□ 1.8
CBX8Q9HC52 PRMT5-213ENST00000553897 1857 ntTSL 2 BASIC26.3■■□□□ 1.8
CBX8Q9HC52 POTEF-201ENST00000361163 1586 ntTSL 5 BASIC26.3■■□□□ 1.8
CBX8Q9HC52 PCMT1-202ENST00000367380 1628 ntTSL 2 BASIC26.3■■□□□ 1.8
CBX8Q9HC52 PCMT1-211ENST00000544496 1628 ntTSL 2 BASIC26.3■■□□□ 1.8
CBX8Q9HC52 MIR6089-201ENST00000616698 64 ntBASIC26.3■■□□□ 1.8
CBX8Q9HC52 CCNJL-201ENST00000257536 1848 ntAPPRIS P1 TSL 2 BASIC26.3■■□□□ 1.8
CBX8Q9HC52 PITX2-209ENST00000557119 1889 ntTSL 2 BASIC26.3■■□□□ 1.8
CBX8Q9HC52 LRRC73-201ENST00000372441 2121 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
CBX8Q9HC52 EPB41L4B-202ENST00000374566 5800 ntAPPRIS P4 TSL 1 (best) BASIC26.29■■□□□ 1.8
CBX8Q9HC52 PDF-201ENST00000288022 1158 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
CBX8Q9HC52 C16orf74-204ENST00000602719 1002 ntAPPRIS ALT2 TSL 3 BASIC26.29■■□□□ 1.8
CBX8Q9HC52 AC079834.2-201ENST00000609776 1949 ntBASIC26.29■■□□□ 1.8
CBX8Q9HC52 AK8-201ENST00000298545 2072 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
CBX8Q9HC52 ECE2-202ENST00000357474 2667 ntTSL 1 (best) BASIC26.29■■□□□ 1.8
CBX8Q9HC52 S1PR4-201ENST00000246115 1565 ntAPPRIS P1 BASIC26.29■■□□□ 1.8
CBX8Q9HC52 BDH1-207ENST00000441275 1605 ntTSL 5 BASIC26.28■■□□□ 1.8
CBX8Q9HC52 DOHH-201ENST00000427575 2031 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
CBX8Q9HC52 RPS2P35-201ENST00000443417 897 ntBASIC26.28■■□□□ 1.8
CBX8Q9HC52 AC078883.1-202ENST00000450443 1397 ntTSL 3 BASIC26.28■■□□□ 1.8
CBX8Q9HC52 ATOH7-201ENST00000373673 1480 ntAPPRIS P1 BASIC26.28■■□□□ 1.8
CBX8Q9HC52 SOD3-201ENST00000382120 1526 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
CBX8Q9HC52 GNB2-203ENST00000393926 1641 ntAPPRIS P1 TSL 5 BASIC26.28■■□□□ 1.8
CBX8Q9HC52 SHD-204ENST00000599689 1729 ntTSL 5 BASIC26.28■■□□□ 1.8
CBX8Q9HC52 C9orf163-202ENST00000624034 2573 ntBASIC26.27■■□□□ 1.8
CBX8Q9HC52 BOK-AS1-201ENST00000434306 643 ntTSL 1 (best) BASIC26.27■■□□□ 1.8
CBX8Q9HC52 AC096888.1-201ENST00000487097 565 ntTSL 4 BASIC26.27■■□□□ 1.8
CBX8Q9HC52 KCTD15-206ENST00000588881 1211 ntAPPRIS P1 TSL 2 BASIC26.27■■□□□ 1.8
CBX8Q9HC52 ZNF444-211ENST00000592949 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC26.27■■□□□ 1.8
CBX8Q9HC52 DONSON-201ENST00000303071 2170 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
CBX8Q9HC52 SYT7-202ENST00000535826 1621 ntTSL 5 BASIC26.26■■□□□ 1.79
CBX8Q9HC52 DGAT1-201ENST00000332324 1473 ntTSL 5 BASIC26.26■■□□□ 1.79
CBX8Q9HC52 ARHGEF7-AS2-201ENST00000425094 1239 ntTSL 1 (best) BASIC26.26■■□□□ 1.79
CBX8Q9HC52 IL15RA-214ENST00000525219 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC26.25■■□□□ 1.79
CBX8Q9HC52 LDB1-201ENST00000361198 2285 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
CBX8Q9HC52 SCRT2-201ENST00000246104 3577 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
CBX8Q9HC52 CDR2-201ENST00000268383 2702 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
CBX8Q9HC52 TMEM51-205ENST00000434578 1861 ntTSL 1 (best) BASIC26.25■■□□□ 1.79
CBX8Q9HC52 UBALD2-201ENST00000327490 1593 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
CBX8Q9HC52 SLAIN1-213ENST00000466548 2637 ntAPPRIS ALT2 TSL 5 BASIC26.24■■□□□ 1.79
CBX8Q9HC52 ARHGDIG-201ENST00000219409 949 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
CBX8Q9HC52 NPHP3-202ENST00000383282 782 ntTSL 1 (best) BASIC26.24■■□□□ 1.79
CBX8Q9HC52 TRAM2-AS1-201ENST00000453216 664 ntTSL 3 BASIC26.24■■□□□ 1.79
CBX8Q9HC52 CLTA-207ENST00000470744 1102 ntTSL 2 BASIC26.24■■□□□ 1.79
CBX8Q9HC52 AC126177.7-201ENST00000547904 679 ntBASIC26.24■■□□□ 1.79
CBX8Q9HC52 ST8SIA6-201ENST00000377602 2276 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
CBX8Q9HC52 RBM4B-203ENST00000525754 2339 ntAPPRIS P1 TSL 2 BASIC26.23■■□□□ 1.79
CBX8Q9HC52 SLC39A4-202ENST00000301305 2174 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
CBX8Q9HC52 AKT1-201ENST00000349310 2866 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
CBX8Q9HC52 C16orf87-201ENST00000285697 1585 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
CBX8Q9HC52 MAP6D1-201ENST00000318631 2111 ntAPPRIS P2 TSL 1 (best) BASIC26.23■■□□□ 1.79
Retrieved 100 of 98,524 protein–RNA pairs in 25.4 ms