Protein–RNA interactions for Protein: Q9HAH1

ZNF556, Zinc finger protein 556, humanhuman

Predictions only

Length 456 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF556Q9HAH1 DUX4L11-201ENST00000611504 1267 ntBASIC21.72■■□□□ 1.07
ZNF556Q9HAH1 DUX4L12-201ENST00000614593 1267 ntBASIC21.72■■□□□ 1.07
ZNF556Q9HAH1 DUX4L14-201ENST00000621227 1267 ntBASIC21.72■■□□□ 1.07
ZNF556Q9HAH1 ARHGEF9-210ENST00000623517 2143 ntTSL 2 BASIC21.72■■□□□ 1.07
ZNF556Q9HAH1 ADARB1-205ENST00000437626 5032 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
ZNF556Q9HAH1 BMP6-201ENST00000283147 2780 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
ZNF556Q9HAH1 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC21.72■■□□□ 1.07
ZNF556Q9HAH1 MEIS3-204ENST00000558555 1715 ntAPPRIS ALT2 TSL 5 BASIC21.72■■□□□ 1.07
ZNF556Q9HAH1 KLC1-205ENST00000380038 2322 ntTSL 2 BASIC21.71■■□□□ 1.07
ZNF556Q9HAH1 ANKRD20A11P-201ENST00000344693 1088 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
ZNF556Q9HAH1 HES6-205ENST00000409356 528 ntTSL 2 BASIC21.71■■□□□ 1.07
ZNF556Q9HAH1 FEZ2-203ENST00000379245 2097 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
ZNF556Q9HAH1 ST3GAL5-268ENST00000640982 2465 ntAPPRIS ALT2 TSL 5 BASIC21.71■■□□□ 1.07
ZNF556Q9HAH1 TAZ-216ENST00000613002 1485 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
ZNF556Q9HAH1 CASK-201ENST00000378154 2494 ntTSL 5 BASIC21.7■■□□□ 1.06
ZNF556Q9HAH1 ZNF784-202ENST00000591479 1559 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
ZNF556Q9HAH1 RABEP2-203ENST00000544477 1645 ntTSL 2 BASIC21.7■■□□□ 1.06
ZNF556Q9HAH1 DNAJB11-201ENST00000265028 1688 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
ZNF556Q9HAH1 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
ZNF556Q9HAH1 PPP2R2C-203ENST00000382599 1807 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
ZNF556Q9HAH1 HSD11B2-201ENST00000326152 1900 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
ZNF556Q9HAH1 ARHGAP29-202ENST00000370217 2043 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
ZNF556Q9HAH1 ST3GAL5-269ENST00000640992 2292 ntAPPRIS ALT2 TSL 5 BASIC21.69■■□□□ 1.06
ZNF556Q9HAH1 GFOD1-204ENST00000603223 2388 ntTSL 2 BASIC21.69■■□□□ 1.06
ZNF556Q9HAH1 LSR-201ENST00000347609 1880 ntAPPRIS ALT2 TSL 1 (best) BASIC21.69■■□□□ 1.06
ZNF556Q9HAH1 LSR-213ENST00000605618 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC21.69■■□□□ 1.06
ZNF556Q9HAH1 EPS8L1-205ENST00000586329 2130 ntTSL 5 BASIC21.69■■□□□ 1.06
ZNF556Q9HAH1 AC092902.2-221ENST00000628476 965 ntTSL 5 BASIC21.69■■□□□ 1.06
ZNF556Q9HAH1 KAT2B-201ENST00000263754 4833 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
ZNF556Q9HAH1 PANK2-201ENST00000316562 2280 ntAPPRIS P2 TSL 1 (best) BASIC21.69■■□□□ 1.06
ZNF556Q9HAH1 ZSCAN18-202ENST00000421612 1488 ntTSL 4 BASIC21.69■■□□□ 1.06
ZNF556Q9HAH1 HSPBP1-201ENST00000255631 1768 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
ZNF556Q9HAH1 SLC52A2-208ENST00000527078 1790 ntAPPRIS P1 TSL 5 BASIC21.69■■□□□ 1.06
ZNF556Q9HAH1 LRRC24-201ENST00000529415 1758 ntAPPRIS P2 TSL 1 (best) BASIC21.69■■□□□ 1.06
ZNF556Q9HAH1 CASP9-201ENST00000333868 2019 ntAPPRIS P2 TSL 1 (best) BASIC21.68■■□□□ 1.06
ZNF556Q9HAH1 TMSB15B-202ENST00000436583 2186 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
ZNF556Q9HAH1 ACTR1B-201ENST00000289228 2243 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
ZNF556Q9HAH1 RP9-201ENST00000297157 1121 ntAPPRIS P2 TSL 1 (best) BASIC21.68■■□□□ 1.06
ZNF556Q9HAH1 INPPL1-201ENST00000298229 4733 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
ZNF556Q9HAH1 TMUB1-202ENST00000392818 1563 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
ZNF556Q9HAH1 ELOC-206ENST00000520242 1573 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
ZNF556Q9HAH1 INPP5J-206ENST00000404453 1613 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
ZNF556Q9HAH1 C18orf65-201ENST00000622985 2076 ntTSL 2 BASIC21.68■■□□□ 1.06
ZNF556Q9HAH1 SIAH2-201ENST00000312960 2517 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
ZNF556Q9HAH1 PITX1-201ENST00000265340 2406 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
ZNF556Q9HAH1 CLEC14A-201ENST00000342213 2267 ntAPPRIS P1 BASIC21.67■■□□□ 1.06
ZNF556Q9HAH1 PROCA1-201ENST00000301039 1566 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
ZNF556Q9HAH1 HOXC9-201ENST00000303450 1516 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
ZNF556Q9HAH1 PGR-AS1-202ENST00000632820 1545 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
ZNF556Q9HAH1 MED25-210ENST00000612854 801 ntTSL 5 BASIC21.67■■□□□ 1.06
ZNF556Q9HAH1 MED25-213ENST00000620467 1293 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
ZNF556Q9HAH1 MED25-214ENST00000622402 642 ntTSL 5 BASIC21.67■■□□□ 1.06
ZNF556Q9HAH1 UNC50-204ENST00000409975 2172 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
ZNF556Q9HAH1 ARG2-201ENST00000261783 2045 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
ZNF556Q9HAH1 GOLGA7-201ENST00000357743 2027 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
ZNF556Q9HAH1 TXNRD2-201ENST00000334363 1893 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
ZNF556Q9HAH1 GNAL-201ENST00000269162 1722 ntAPPRIS P1 TSL 2 BASIC21.66■■□□□ 1.06
ZNF556Q9HAH1 SLC35B2-204ENST00000537814 1715 ntTSL 2 BASIC21.66■■□□□ 1.06
ZNF556Q9HAH1 SAC3D1-201ENST00000398846 1566 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
ZNF556Q9HAH1 HMGA2-201ENST00000354636 1529 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
ZNF556Q9HAH1 LTBP3-212ENST00000529189 1997 ntTSL 2 BASIC21.66■■□□□ 1.06
ZNF556Q9HAH1 C7orf25-206ENST00000447342 1823 ntTSL 2 BASIC21.66■■□□□ 1.06
ZNF556Q9HAH1 CTSF-201ENST00000310325 2035 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
ZNF556Q9HAH1 CBARP-202ENST00000382477 2453 ntAPPRIS ALT2 TSL 5 BASIC21.65■■□□□ 1.06
ZNF556Q9HAH1 CPOX-201ENST00000264193 2825 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
ZNF556Q9HAH1 KCTD15-206ENST00000588881 1211 ntAPPRIS P1 TSL 2 BASIC21.65■■□□□ 1.06
ZNF556Q9HAH1 C16orf74-204ENST00000602719 1002 ntAPPRIS ALT2 TSL 3 BASIC21.65■■□□□ 1.06
ZNF556Q9HAH1 PHC2-202ENST00000373418 2550 ntAPPRIS ALT2 TSL 1 (best) BASIC21.65■■□□□ 1.06
ZNF556Q9HAH1 SAMD4B-208ENST00000598913 2877 ntAPPRIS ALT1 TSL 1 (best) BASIC21.65■■□□□ 1.06
ZNF556Q9HAH1 BTBD6-205ENST00000536364 1973 ntAPPRIS P2 TSL 5 BASIC21.65■■□□□ 1.06
ZNF556Q9HAH1 CNTFR-201ENST00000351266 1910 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
ZNF556Q9HAH1 CACTIN-AS1-201ENST00000592274 1913 ntTSL 2 BASIC21.65■■□□□ 1.06
ZNF556Q9HAH1 AKT2-206ENST00000392038 5300 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
ZNF556Q9HAH1 PDF-201ENST00000288022 1158 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
ZNF556Q9HAH1 DYRK2-202ENST00000344096 8912 ntAPPRIS P4 TSL 1 (best) BASIC21.64■■□□□ 1.05
ZNF556Q9HAH1 NPHP3-202ENST00000383282 782 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
ZNF556Q9HAH1 PCMT1-202ENST00000367380 1628 ntTSL 2 BASIC21.64■■□□□ 1.05
ZNF556Q9HAH1 PCMT1-211ENST00000544496 1628 ntTSL 2 BASIC21.64■■□□□ 1.05
ZNF556Q9HAH1 DGCR6-208ENST00000608842 1837 ntTSL 2 BASIC21.64■■□□□ 1.05
ZNF556Q9HAH1 BIN1-207ENST00000357970 2497 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
ZNF556Q9HAH1 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
ZNF556Q9HAH1 SMOX-203ENST00000339123 2074 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
ZNF556Q9HAH1 SDS-201ENST00000257549 1606 ntAPPRIS P1 TSL 2 BASIC21.63■■□□□ 1.05
ZNF556Q9HAH1 S1PR4-201ENST00000246115 1565 ntAPPRIS P1 BASIC21.63■■□□□ 1.05
ZNF556Q9HAH1 AURKAIP1-203ENST00000338370 1072 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
ZNF556Q9HAH1 ARHGEF7-AS2-201ENST00000425094 1239 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
ZNF556Q9HAH1 ESR2-202ENST00000341099 2060 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
ZNF556Q9HAH1 IQCJ-SCHIP1-201ENST00000412423 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC21.63■■□□□ 1.05
ZNF556Q9HAH1 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC21.63■■□□□ 1.05
ZNF556Q9HAH1 RAB40B-201ENST00000269347 2189 ntTSL 2 BASIC21.63■■□□□ 1.05
ZNF556Q9HAH1 SMOX-201ENST00000278795 2164 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
ZNF556Q9HAH1 ALG1L9P-201ENST00000508969 2165 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
ZNF556Q9HAH1 C1QL2-201ENST00000272520 2043 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
ZNF556Q9HAH1 RARA-204ENST00000394089 2024 ntAPPRIS P1 TSL 2 BASIC21.62■■□□□ 1.05
ZNF556Q9HAH1 ERF-201ENST00000222329 2698 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
ZNF556Q9HAH1 WNT11-201ENST00000322563 1930 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
ZNF556Q9HAH1 KAT8-202ENST00000448516 1789 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
ZNF556Q9HAH1 NKX2-3-202ENST00000622383 1986 ntTSL 5 BASIC21.61■■□□□ 1.05
ZNF556Q9HAH1 LRP5-201ENST00000294304 5159 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
ZNF556Q9HAH1 CPNE2-202ENST00000535318 2316 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Retrieved 100 of 98,524 protein–RNA pairs in 20.2 ms