Protein–RNA interactions for Protein: Q9C040

TRIM2, Tripartite motif-containing protein 2, humanhuman

Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM2Q9C040 ZC3H14-202ENST00000302216 2560 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
TRIM2Q9C040 CCDC151-202ENST00000586836 1867 ntTSL 2 BASIC21.63■■□□□ 1.05
TRIM2Q9C040 PTCH1-210ENST00000468211 1254 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
TRIM2Q9C040 PCSK6-216ENST00000615296 2921 ntTSL 5 BASIC21.63■■□□□ 1.05
TRIM2Q9C040 BIN1-201ENST00000259238 2338 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
TRIM2Q9C040 TMEM120A-214ENST00000493111 1456 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
TRIM2Q9C040 SHD-201ENST00000543264 2577 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
TRIM2Q9C040 IGFBP3-201ENST00000275521 2262 ntAPPRIS P3 TSL 1 (best) BASIC21.62■■□□□ 1.05
TRIM2Q9C040 AC093323.1-202ENST00000635031 2045 ntBASIC21.62■■□□□ 1.05
TRIM2Q9C040 RIMKLB-205ENST00000535829 2236 ntAPPRIS P1 TSL 2 BASIC21.62■■□□□ 1.05
TRIM2Q9C040 NTHL1-201ENST00000219066 1067 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
TRIM2Q9C040 AC133552.2-201ENST00000619106 1032 ntBASIC21.62■■□□□ 1.05
TRIM2Q9C040 ADGRA2-202ENST00000412232 5651 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
TRIM2Q9C040 TBL2-222ENST00000610724 2165 ntTSL 5 BASIC21.62■■□□□ 1.05
TRIM2Q9C040 AC009831.1-201ENST00000580420 1582 ntBASIC21.61■■□□□ 1.05
TRIM2Q9C040 NPHS2-202ENST00000367616 1670 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
TRIM2Q9C040 RIPPLY2-202ENST00000369689 664 ntAPPRIS P2 TSL 1 (best) BASIC21.61■■□□□ 1.05
TRIM2Q9C040 PXMP2-205ENST00000543589 632 ntTSL 3 BASIC21.61■■□□□ 1.05
TRIM2Q9C040 CCR10-201ENST00000332438 1773 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
TRIM2Q9C040 HYI-213ENST00000583037 1322 ntTSL 5 BASIC21.6■■□□□ 1.05
TRIM2Q9C040 LYL1-201ENST00000264824 1490 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
TRIM2Q9C040 CDKN3-202ENST00000335183 893 ntAPPRIS P2 TSL 1 (best) BASIC21.6■■□□□ 1.05
TRIM2Q9C040 AC005540.1-201ENST00000413911 919 ntTSL 3 BASIC21.6■■□□□ 1.05
TRIM2Q9C040 CDKN3-211ENST00000611205 874 ntAPPRIS ALT2 TSL 5 BASIC21.6■■□□□ 1.05
TRIM2Q9C040 EED-207ENST00000528180 1745 ntTSL 5 BASIC21.6■■□□□ 1.05
TRIM2Q9C040 BBC3-203ENST00000439096 1838 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
TRIM2Q9C040 TSKU-201ENST00000333090 2712 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
TRIM2Q9C040 PICALM-202ENST00000393346 2340 ntAPPRIS P3 TSL 1 (best) BASIC21.59■■□□□ 1.05
TRIM2Q9C040 PTPA-210ENST00000414510 1153 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
TRIM2Q9C040 PITX3-202ENST00000539804 1187 ntAPPRIS P1 TSL 5 BASIC21.59■■□□□ 1.05
TRIM2Q9C040 SUGCT-209ENST00000628514 1591 ntAPPRIS P4 TSL 1 (best) BASIC21.59■■□□□ 1.05
TRIM2Q9C040 TANGO2-204ENST00000401833 1920 ntTSL 5 BASIC21.59■■□□□ 1.05
TRIM2Q9C040 CYS1-201ENST00000381813 2738 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
TRIM2Q9C040 RASGEF1B-211ENST00000514050 537 ntTSL 2 BASIC21.58■■□□□ 1.05
TRIM2Q9C040 PTH1R-206ENST00000430002 1947 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
TRIM2Q9C040 R3HDM4-203ENST00000587975 1765 ntTSL 3 BASIC21.58■■□□□ 1.04
TRIM2Q9C040 ARHGAP29-202ENST00000370217 2043 ntTSL 1 (best) BASIC21.58■■□□□ 1.04
TRIM2Q9C040 SLC30A3-201ENST00000233535 2260 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
TRIM2Q9C040 MRPS7-203ENST00000579002 1638 ntTSL 2 BASIC21.58■■□□□ 1.04
TRIM2Q9C040 AGBL5-201ENST00000323064 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC21.58■■□□□ 1.04
TRIM2Q9C040 C7orf25-206ENST00000447342 1823 ntTSL 2 BASIC21.57■■□□□ 1.04
TRIM2Q9C040 NFKBIB-204ENST00000572515 1929 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
TRIM2Q9C040 NUDT18-202ENST00000613958 1754 ntTSL 2 BASIC21.57■■□□□ 1.04
TRIM2Q9C040 C19orf12-207ENST00000592153 1504 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
TRIM2Q9C040 BTBD19-201ENST00000409335 1214 ntTSL 5 BASIC21.57■■□□□ 1.04
TRIM2Q9C040 AC138647.1-201ENST00000427937 648 ntAPPRIS P1 TSL 5 BASIC21.57■■□□□ 1.04
TRIM2Q9C040 U85056.1-201ENST00000616429 682 ntBASIC21.57■■□□□ 1.04
TRIM2Q9C040 CAPNS1-216ENST00000628306 1389 ntTSL 5 BASIC21.57■■□□□ 1.04
TRIM2Q9C040 SMOX-203ENST00000339123 2074 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
TRIM2Q9C040 HDGFL2-210ENST00000621835 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC21.57■■□□□ 1.04
TRIM2Q9C040 FAM124A-204ENST00000615498 2383 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
TRIM2Q9C040 OTUD5-203ENST00000396743 2682 ntAPPRIS ALT1 TSL 1 (best) BASIC21.56■■□□□ 1.04
TRIM2Q9C040 RITA1-203ENST00000552495 1898 ntTSL 2 BASIC21.56■■□□□ 1.04
TRIM2Q9C040 WBP1-201ENST00000233615 1294 ntAPPRIS P2 TSL 1 (best) BASIC21.56■■□□□ 1.04
TRIM2Q9C040 TSPY4-202ENST00000426950 1179 ntAPPRIS P5 TSL 5 BASIC21.56■■□□□ 1.04
TRIM2Q9C040 AC012354.3-201ENST00000623734 483 ntBASIC21.56■■□□□ 1.04
TRIM2Q9C040 KCTD5-201ENST00000301738 2482 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
TRIM2Q9C040 ADAD2-202ENST00000315906 1995 ntAPPRIS ALT2 TSL 1 (best) BASIC21.56■■□□□ 1.04
TRIM2Q9C040 PARL-202ENST00000317096 1414 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
TRIM2Q9C040 SLC22A18-201ENST00000312221 1628 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
TRIM2Q9C040 PCMT1-202ENST00000367380 1628 ntTSL 2 BASIC21.55■■□□□ 1.04
TRIM2Q9C040 PCMT1-211ENST00000544496 1628 ntTSL 2 BASIC21.55■■□□□ 1.04
TRIM2Q9C040 AL590677.1-201ENST00000438431 380 ntTSL 5 BASIC21.55■■□□□ 1.04
TRIM2Q9C040 TRIM52-AS1-202ENST00000507434 672 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
TRIM2Q9C040 MANF-204ENST00000528157 1153 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
TRIM2Q9C040 SLC22A31-206ENST00000614943 1860 ntTSL 5 BASIC21.55■■□□□ 1.04
TRIM2Q9C040 NDEL1-201ENST00000334527 2372 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
TRIM2Q9C040 ZNRF1-201ENST00000320619 2479 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
TRIM2Q9C040 ECEL1-202ENST00000409941 2322 ntAPPRIS ALT1 TSL 1 (best) BASIC21.55■■□□□ 1.04
TRIM2Q9C040 PREB-202ENST00000406567 1910 ntTSL 5 BASIC21.55■■□□□ 1.04
TRIM2Q9C040 PLEKHO1-202ENST00000369126 1809 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
TRIM2Q9C040 ANKRD9-204ENST00000559651 1444 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
TRIM2Q9C040 TSPAN4-202ENST00000397396 1332 ntTSL 5 BASIC21.55■■□□□ 1.04
TRIM2Q9C040 ARSB-206ENST00000565165 1772 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
TRIM2Q9C040 FGD5-AS1-204ENST00000430166 1184 ntTSL 2 BASIC21.54■■□□□ 1.04
TRIM2Q9C040 MIR6089-201ENST00000616698 64 ntBASIC21.54■■□□□ 1.04
TRIM2Q9C040 CPLX1-203ENST00000505203 2011 ntTSL 2 BASIC21.54■■□□□ 1.04
TRIM2Q9C040 ZNF641-205ENST00000547026 1823 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
TRIM2Q9C040 DNAJB11-201ENST00000265028 1688 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
TRIM2Q9C040 ARHGEF9-210ENST00000623517 2143 ntTSL 2 BASIC21.53■■□□□ 1.04
TRIM2Q9C040 SLC12A2-201ENST00000262461 6885 ntAPPRIS P3 TSL 1 (best) BASIC21.53■■□□□ 1.04
TRIM2Q9C040 PSMG3-202ENST00000288607 1391 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
TRIM2Q9C040 DYRK1B-201ENST00000323039 2535 ntAPPRIS P3 TSL 1 (best) BASIC21.53■■□□□ 1.04
TRIM2Q9C040 ZNF205-202ENST00000382192 2062 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
TRIM2Q9C040 ZNF263-204ENST00000573578 1636 ntTSL 5 BASIC21.53■■□□□ 1.04
TRIM2Q9C040 PHLPP1-201ENST00000262719 6390 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
TRIM2Q9C040 HMX2-201ENST00000339992 1628 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
TRIM2Q9C040 NEURL1B-203ENST00000522853 1263 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
TRIM2Q9C040 SNX5-219ENST00000606602 885 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
TRIM2Q9C040 AL022341.2-201ENST00000573609 1417 ntTSL 3 BASIC21.52■■□□□ 1.04
TRIM2Q9C040 MSX2-201ENST00000239243 2241 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
TRIM2Q9C040 FEZ2-203ENST00000379245 2097 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
TRIM2Q9C040 AC105219.1-201ENST00000531565 1963 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
TRIM2Q9C040 HNRNPUL1-221ENST00000617305 1018 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
TRIM2Q9C040 SAP25-204ENST00000622764 1031 ntAPPRIS ALT2 TSL 5 BASIC21.51■■□□□ 1.03
TRIM2Q9C040 PTPN2-202ENST00000327283 1706 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
TRIM2Q9C040 RBMXL2-201ENST00000306904 1874 ntAPPRIS P1 BASIC21.51■■□□□ 1.03
TRIM2Q9C040 TAZ-216ENST00000613002 1485 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
TRIM2Q9C040 ZMYND19-201ENST00000298585 1375 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
TRIM2Q9C040 LTB4R2-205ENST00000543919 1560 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Retrieved 100 of 98,524 protein–RNA pairs in 60.5 ms