Protein–RNA interactions for Protein: Q9BWW7

SCRT1, Transcriptional repressor scratch 1, humanhuman

Predictions only

Length 348 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCRT1Q9BWW7 SPATA33-209ENST00000579310 1490 ntAPPRIS ALT2 TSL 2 BASIC18.84■□□□□ 0.61
SCRT1Q9BWW7 CPE-201ENST00000402744 2421 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
SCRT1Q9BWW7 TDRKH-206ENST00000440583 2296 ntTSL 5 BASIC18.84■□□□□ 0.61
SCRT1Q9BWW7 NKX2-1-201ENST00000354822 2191 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
SCRT1Q9BWW7 PCYT2-201ENST00000331285 2147 ntTSL 2 BASIC18.84■□□□□ 0.61
SCRT1Q9BWW7 FKBP1A-204ENST00000400137 1622 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
SCRT1Q9BWW7 DPF1-217ENST00000614244 2356 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
SCRT1Q9BWW7 SOWAHD-201ENST00000343905 1552 ntAPPRIS P1 BASIC18.84■□□□□ 0.61
SCRT1Q9BWW7 AC141586.4-201ENST00000624558 1573 ntBASIC18.84■□□□□ 0.61
SCRT1Q9BWW7 NCK2-201ENST00000233154 2683 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
SCRT1Q9BWW7 HRH3-202ENST00000340177 2659 ntAPPRIS P2 TSL 1 (best) BASIC18.84■□□□□ 0.61
SCRT1Q9BWW7 EFCC1-201ENST00000436022 2691 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
SCRT1Q9BWW7 TBX1-201ENST00000329705 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
SCRT1Q9BWW7 KAZN-207ENST00000503743 1475 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
SCRT1Q9BWW7 IRX2-201ENST00000302057 2456 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
SCRT1Q9BWW7 EP400NL-214ENST00000641289 2402 ntBASIC18.83■□□□□ 0.61
SCRT1Q9BWW7 IQSEC3-201ENST00000382841 2701 ntAPPRIS P3 TSL 2 BASIC18.83■□□□□ 0.61
SCRT1Q9BWW7 ABHD6-201ENST00000295962 2393 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
SCRT1Q9BWW7 SLC35B2-202ENST00000393812 2043 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
SCRT1Q9BWW7 NEIL1-206ENST00000564784 2019 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.61
SCRT1Q9BWW7 CCNYL1-202ENST00000339882 2619 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
SCRT1Q9BWW7 NECAB2-201ENST00000305202 1608 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
SCRT1Q9BWW7 CHML-204ENST00000638121 920 ntTSL 2 BASIC18.83■□□□□ 0.6
SCRT1Q9BWW7 AMER2-202ENST00000515384 3197 ntAPPRIS P1 BASIC18.83■□□□□ 0.6
SCRT1Q9BWW7 STK25-234ENST00000535007 2459 ntTSL 2 BASIC18.83■□□□□ 0.6
SCRT1Q9BWW7 GALC-202ENST00000393568 2054 ntTSL 2 BASIC18.83■□□□□ 0.6
SCRT1Q9BWW7 RUFY1-201ENST00000319449 2646 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.6
SCRT1Q9BWW7 CERS1-205ENST00000623927 2558 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
SCRT1Q9BWW7 CIDEB-201ENST00000258807 2294 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
SCRT1Q9BWW7 C6orf136-201ENST00000293604 1978 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
SCRT1Q9BWW7 DLEU2-208ENST00000621282 3068 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
SCRT1Q9BWW7 MCMBP-202ENST00000369077 2465 ntAPPRIS ALT1 TSL 1 (best) BASIC18.82■□□□□ 0.6
SCRT1Q9BWW7 SMOX-201ENST00000278795 2164 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
SCRT1Q9BWW7 PTPMT1-205ENST00000534775 1611 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
SCRT1Q9BWW7 AL451007.3-201ENST00000640271 588 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
SCRT1Q9BWW7 ADAMTSL5-202ENST00000395467 1533 ntTSL 5 BASIC18.82■□□□□ 0.6
SCRT1Q9BWW7 APBB3-204ENST00000358580 2020 ntTSL 5 BASIC18.82■□□□□ 0.6
SCRT1Q9BWW7 NFE2L3P1-201ENST00000588207 1959 ntBASIC18.82■□□□□ 0.6
SCRT1Q9BWW7 GRK4-202ENST00000398051 2068 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
SCRT1Q9BWW7 KLC1-227ENST00000634686 2229 ntTSL 5 BASIC18.81■□□□□ 0.6
SCRT1Q9BWW7 CCDC151-203ENST00000591179 1943 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
SCRT1Q9BWW7 HSPB11-201ENST00000194214 915 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
SCRT1Q9BWW7 ABHD17AP4-201ENST00000411545 909 ntBASIC18.81■□□□□ 0.6
SCRT1Q9BWW7 GNPTG-204ENST00000527137 386 ntTSL 2 BASIC18.81■□□□□ 0.6
SCRT1Q9BWW7 TDRKH-205ENST00000368827 2318 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
SCRT1Q9BWW7 MRPL4-201ENST00000253099 1455 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
SCRT1Q9BWW7 PGF-203ENST00000553716 1699 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
SCRT1Q9BWW7 NHLRC4-202ENST00000540585 2071 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
SCRT1Q9BWW7 DLL3-201ENST00000205143 2332 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
SCRT1Q9BWW7 ZBTB46-202ENST00000302995 2335 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
SCRT1Q9BWW7 CAMK1D-203ENST00000615792 1725 ntTSL 5 BASIC18.8■□□□□ 0.6
SCRT1Q9BWW7 KAT5-208ENST00000530446 1697 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
SCRT1Q9BWW7 NFIX-203ENST00000397661 3143 ntTSL 5 BASIC18.8■□□□□ 0.6
SCRT1Q9BWW7 IGFBPL1-201ENST00000377694 1093 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
SCRT1Q9BWW7 AC010907.1-201ENST00000441632 807 ntTSL 3 BASIC18.8■□□□□ 0.6
SCRT1Q9BWW7 AC004540.2-201ENST00000451368 611 ntTSL 2 BASIC18.8■□□□□ 0.6
SCRT1Q9BWW7 ZNF706-207ENST00000519882 959 ntAPPRIS P1 TSL 3 BASIC18.8■□□□□ 0.6
SCRT1Q9BWW7 ZNF706-213ENST00000521272 732 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
SCRT1Q9BWW7 HGH1-207ENST00000628266 258 ntTSL 5 BASIC18.8■□□□□ 0.6
SCRT1Q9BWW7 ABCB10P4-201ENST00000566803 2184 ntBASIC18.8■□□□□ 0.6
SCRT1Q9BWW7 PRPSAP2-201ENST00000268835 1910 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
SCRT1Q9BWW7 TMEM104-205ENST00000582773 1740 ntTSL 2 BASIC18.8■□□□□ 0.6
SCRT1Q9BWW7 CHADL-201ENST00000216241 2533 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
SCRT1Q9BWW7 SKIDA1-201ENST00000444772 2667 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
SCRT1Q9BWW7 REEP6-201ENST00000233596 1794 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
SCRT1Q9BWW7 TST-202ENST00000403892 1797 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
SCRT1Q9BWW7 TSPAN4-207ENST00000397411 1025 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
SCRT1Q9BWW7 FKBP1A-210ENST00000614856 562 ntTSL 2 BASIC18.79■□□□□ 0.6
SCRT1Q9BWW7 RHOC-202ENST00000339083 1418 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
SCRT1Q9BWW7 WRNIP1-204ENST00000380773 2670 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
SCRT1Q9BWW7 GAS1-201ENST00000298743 2827 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
SCRT1Q9BWW7 CCDC136-202ENST00000378685 1689 ntAPPRIS ALT2 TSL 2 BASIC18.79■□□□□ 0.6
SCRT1Q9BWW7 ZNF641-205ENST00000547026 1823 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
SCRT1Q9BWW7 USP48-205ENST00000421625 2818 ntTSL 2 BASIC18.78■□□□□ 0.6
SCRT1Q9BWW7 AC004980.1-201ENST00000418663 2667 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
SCRT1Q9BWW7 REPIN1-214ENST00000489432 2058 ntAPPRIS ALT2 TSL 2 BASIC18.78■□□□□ 0.6
SCRT1Q9BWW7 SCARA5-204ENST00000524352 1945 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
SCRT1Q9BWW7 FAM83D-201ENST00000619304 2475 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
SCRT1Q9BWW7 DHRS13-203ENST00000426464 1569 ntTSL 2 BASIC18.78■□□□□ 0.6
SCRT1Q9BWW7 WRNIP1-203ENST00000380771 2595 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
SCRT1Q9BWW7 KDM4C-203ENST00000401787 1406 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
SCRT1Q9BWW7 LINC01971-201ENST00000617888 1048 ntBASIC18.78■□□□□ 0.6
SCRT1Q9BWW7 AC004812.2-201ENST00000611079 2094 ntBASIC18.78■□□□□ 0.6
SCRT1Q9BWW7 PEX10-204ENST00000507596 1941 ntAPPRIS ALT1 TSL 5 BASIC18.78■□□□□ 0.6
SCRT1Q9BWW7 UBTD1-201ENST00000370664 1706 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
SCRT1Q9BWW7 RNF223-201ENST00000453464 1902 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.6
SCRT1Q9BWW7 LSM14B-204ENST00000370915 1079 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
SCRT1Q9BWW7 CIB2-202ENST00000539011 1511 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
SCRT1Q9BWW7 PTOV1-201ENST00000391842 1875 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
SCRT1Q9BWW7 BSN-AS2-201ENST00000421598 2603 ntTSL 2 BASIC18.77■□□□□ 0.6
SCRT1Q9BWW7 C12orf75-201ENST00000443585 1366 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.6
SCRT1Q9BWW7 C8orf82-202ENST00000524821 2476 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.59
SCRT1Q9BWW7 TMEM200B-201ENST00000420504 2553 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
SCRT1Q9BWW7 NRG2-201ENST00000289409 2535 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
SCRT1Q9BWW7 CABP1-202ENST00000316803 1658 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
SCRT1Q9BWW7 EFS-203ENST00000429593 2610 ntTSL 2 BASIC18.76■□□□□ 0.59
SCRT1Q9BWW7 SH3GLB2-203ENST00000372564 2982 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
SCRT1Q9BWW7 DTNB-206ENST00000404103 2384 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
SCRT1Q9BWW7 MAPK12-211ENST00000622558 1779 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
SCRT1Q9BWW7 DDN-AS1-202ENST00000547866 2114 ntTSL 3 BASIC18.76■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 54.7 ms