Protein–RNA interactions for Protein: Q9BT23

LIMD2, LIM domain-containing protein 2, humanhuman

Predictions only

Length 127 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD2Q9BT23 TYMP-203ENST00000395680 1608 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
LIMD2Q9BT23 TYMP-204ENST00000395681 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
LIMD2Q9BT23 ECEL1P2-201ENST00000461596 1295 ntBASIC13.9□□□□□ -0.18
LIMD2Q9BT23 RPL27A-206ENST00000530022 878 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
LIMD2Q9BT23 AC016595.1-201ENST00000559410 383 ntTSL 3 BASIC13.9□□□□□ -0.18
LIMD2Q9BT23 CAPNS1-211ENST00000590874 926 ntTSL 5 BASIC13.9□□□□□ -0.18
LIMD2Q9BT23 TSR3-201ENST00000007390 1243 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
LIMD2Q9BT23 SMPD5-203ENST00000639008 1464 ntBASIC13.9□□□□□ -0.18
LIMD2Q9BT23 PIP5K1C-203ENST00000539785 2289 ntAPPRIS ALT2 TSL 2 BASIC13.9□□□□□ -0.18
LIMD2Q9BT23 BMP6-201ENST00000283147 2780 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
LIMD2Q9BT23 THRA-201ENST00000264637 2538 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
LIMD2Q9BT23 BIN1-211ENST00000409400 2143 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
LIMD2Q9BT23 LAT-201ENST00000354453 1713 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.18
LIMD2Q9BT23 PDPK1-204ENST00000441549 1729 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
LIMD2Q9BT23 SOD3-201ENST00000382120 1526 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.19
LIMD2Q9BT23 CBWD5-202ENST00000377384 1347 ntTSL 1 (best) BASIC13.9□□□□□ -0.19
LIMD2Q9BT23 DGAT2-201ENST00000228027 2453 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
LIMD2Q9BT23 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC13.89□□□□□ -0.19
LIMD2Q9BT23 GYG2-205ENST00000398806 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
LIMD2Q9BT23 ZNF821-201ENST00000313565 1874 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
LIMD2Q9BT23 C2CD4D-201ENST00000454109 1757 ntAPPRIS P1 TSL 2 BASIC13.89□□□□□ -0.19
LIMD2Q9BT23 LRFN4-202ENST00000393952 1550 ntTSL 5 BASIC13.89□□□□□ -0.19
LIMD2Q9BT23 RUNX1-205ENST00000399240 1590 ntTSL 3 BASIC13.89□□□□□ -0.19
LIMD2Q9BT23 NSMCE4A-202ENST00000369023 1394 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
LIMD2Q9BT23 AGO3-204ENST00000397828 1035 ntTSL 2 BASIC13.89□□□□□ -0.19
LIMD2Q9BT23 RPS2-202ENST00000526522 924 ntTSL 2 BASIC13.89□□□□□ -0.19
LIMD2Q9BT23 MAGI2-212ENST00000626691 4599 ntTSL 5 BASIC13.89□□□□□ -0.19
LIMD2Q9BT23 KREMEN2-205ENST00000575769 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
LIMD2Q9BT23 NAGS-201ENST00000293404 2182 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
LIMD2Q9BT23 FNDC11-204ENST00000615526 2954 ntAPPRIS P1 BASIC13.89□□□□□ -0.19
LIMD2Q9BT23 C15orf59-201ENST00000379822 1342 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
LIMD2Q9BT23 KRT72-202ENST00000354310 1764 ntTSL 2 BASIC13.88□□□□□ -0.19
LIMD2Q9BT23 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
LIMD2Q9BT23 LSR-204ENST00000361790 2210 ntAPPRIS P4 TSL 1 (best) BASIC13.88□□□□□ -0.19
LIMD2Q9BT23 FBXL8-201ENST00000258200 1658 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
LIMD2Q9BT23 CAPZB-203ENST00000375142 1686 ntAPPRIS ALT1 TSL 5 BASIC13.88□□□□□ -0.19
LIMD2Q9BT23 PEX26-202ENST00000399744 1672 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
LIMD2Q9BT23 HAS2-AS1-201ENST00000514180 1656 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
LIMD2Q9BT23 RNF19B-203ENST00000373456 2560 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
LIMD2Q9BT23 RPL13-202ENST00000393099 2385 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
LIMD2Q9BT23 FRMD8-203ENST00000416776 1818 ntTSL 2 BASIC13.88□□□□□ -0.19
LIMD2Q9BT23 CENPV-201ENST00000299736 1165 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
LIMD2Q9BT23 MAP3K8-203ENST00000375322 932 ntTSL 2 BASIC13.88□□□□□ -0.19
LIMD2Q9BT23 VIPR2-204ENST00000421760 717 ntTSL 3 BASIC13.88□□□□□ -0.19
LIMD2Q9BT23 AL157400.5-201ENST00000507624 621 ntBASIC13.88□□□□□ -0.19
LIMD2Q9BT23 AP000911.3-201ENST00000526377 1130 ntTSL 3 BASIC13.88□□□□□ -0.19
LIMD2Q9BT23 MIR4449-201ENST00000578365 66 ntBASIC13.88□□□□□ -0.19
LIMD2Q9BT23 MBP-237ENST00000579129 1052 ntTSL 5 BASIC13.88□□□□□ -0.19
LIMD2Q9BT23 SRP68-213ENST00000629930 165 ntTSL 5 BASIC13.88□□□□□ -0.19
LIMD2Q9BT23 CACNA1B-203ENST00000371355 9647 ntAPPRIS ALT2 TSL 5 BASIC13.88□□□□□ -0.19
LIMD2Q9BT23 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
LIMD2Q9BT23 BSCL2-205ENST00000403550 1693 ntAPPRIS P3 TSL 5 BASIC13.88□□□□□ -0.19
LIMD2Q9BT23 CCZ1B-201ENST00000316731 2885 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
LIMD2Q9BT23 ZDHHC3-203ENST00000342790 1336 ntTSL 5 BASIC13.88□□□□□ -0.19
LIMD2Q9BT23 BTBD6-203ENST00000392554 2176 ntAPPRIS P2 TSL 1 (best) BASIC13.88□□□□□ -0.19
LIMD2Q9BT23 TCF3-203ENST00000395423 2779 ntTSL 5 BASIC13.87□□□□□ -0.19
LIMD2Q9BT23 ZNF747-203ENST00000568028 1511 ntAPPRIS P1 TSL 2 BASIC13.87□□□□□ -0.19
LIMD2Q9BT23 AC025884.2-201ENST00000553429 711 ntBASIC13.87□□□□□ -0.19
LIMD2Q9BT23 BLOC1S3-202ENST00000587722 732 ntAPPRIS P1 BASIC13.87□□□□□ -0.19
LIMD2Q9BT23 AC092296.2-201ENST00000589470 999 ntBASIC13.87□□□□□ -0.19
LIMD2Q9BT23 MOB2-207ENST00000614710 705 ntTSL 5 BASIC13.87□□□□□ -0.19
LIMD2Q9BT23 SDK1-202ENST00000404826 10397 ntAPPRIS P2 TSL 1 (best) BASIC13.87□□□□□ -0.19
LIMD2Q9BT23 PIM3-201ENST00000360612 2369 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
LIMD2Q9BT23 AC133561.1-201ENST00000568600 2415 ntBASIC13.86□□□□□ -0.19
LIMD2Q9BT23 PQLC3-204ENST00000441908 1784 ntTSL 2 BASIC13.86□□□□□ -0.19
LIMD2Q9BT23 RPUSD1-201ENST00000007264 2050 ntAPPRIS P1 TSL 2 BASIC13.86□□□□□ -0.19
LIMD2Q9BT23 CCDC154-201ENST00000389176 2212 ntAPPRIS P5 TSL 5 BASIC13.86□□□□□ -0.19
LIMD2Q9BT23 CRACR2B-201ENST00000450448 1663 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
LIMD2Q9BT23 LINC01578-209ENST00000557682 2683 ntTSL 2 BASIC13.86□□□□□ -0.19
LIMD2Q9BT23 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
LIMD2Q9BT23 PKIG-205ENST00000372891 1443 ntAPPRIS P1 TSL 2 BASIC13.86□□□□□ -0.19
LIMD2Q9BT23 TMEM203-201ENST00000343666 1557 ntAPPRIS P1 BASIC13.86□□□□□ -0.19
LIMD2Q9BT23 POTEF-201ENST00000361163 1586 ntTSL 5 BASIC13.86□□□□□ -0.19
LIMD2Q9BT23 VEGFA-209ENST00000425836 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
LIMD2Q9BT23 TWF2-201ENST00000305533 1718 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
LIMD2Q9BT23 VAX1-202ENST00000369206 1723 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
LIMD2Q9BT23 SCN1B-201ENST00000262631 1670 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
LIMD2Q9BT23 SH2B1-205ENST00000538342 1532 ntTSL 2 BASIC13.85□□□□□ -0.19
LIMD2Q9BT23 FAM83H-201ENST00000388913 5654 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
LIMD2Q9BT23 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
LIMD2Q9BT23 SNHG7-204ENST00000447221 2157 ntTSL 2 BASIC13.85□□□□□ -0.19
LIMD2Q9BT23 PAPOLA-225ENST00000557471 1421 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
LIMD2Q9BT23 FAM171A2-201ENST00000293443 3160 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
LIMD2Q9BT23 KRT18P10-201ENST00000388836 1287 ntBASIC13.85□□□□□ -0.19
LIMD2Q9BT23 MAPK3-203ENST00000395199 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
LIMD2Q9BT23 MAPK3-205ENST00000395202 1008 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
LIMD2Q9BT23 RP9P-202ENST00000450133 1212 ntBASIC13.85□□□□□ -0.19
LIMD2Q9BT23 CLDND1-226ENST00000513287 999 ntAPPRIS P1 TSL 2 BASIC13.85□□□□□ -0.19
LIMD2Q9BT23 C16orf52-207ENST00000569656 1257 ntTSL 5 BASIC13.85□□□□□ -0.19
LIMD2Q9BT23 RINL-202ENST00000591812 1910 ntAPPRIS ALT2 TSL 2 BASIC13.85□□□□□ -0.19
LIMD2Q9BT23 ANKRD16-202ENST00000380092 1646 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
LIMD2Q9BT23 CTSZ-201ENST00000217131 1495 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
LIMD2Q9BT23 SP5-201ENST00000375281 2033 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
LIMD2Q9BT23 C21orf2-202ENST00000339818 2233 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
LIMD2Q9BT23 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC13.84□□□□□ -0.19
LIMD2Q9BT23 BMP2K-204ENST00000502871 3195 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
LIMD2Q9BT23 TTBK2-205ENST00000567274 1777 ntTSL 5 BASIC13.84□□□□□ -0.19
LIMD2Q9BT23 ZBTB25-202ENST00000555220 1440 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
LIMD2Q9BT23 FCRLB-205ENST00000367948 1977 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
LIMD2Q9BT23 ST6GALNAC2-201ENST00000225276 2170 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 12.7 ms