Protein–RNA interactions for Protein: Q99986

VRK1, Serine/threonine-protein kinase VRK1, humanhuman

Predicted RBP Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1Q99986 TYMP-204ENST00000395681 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
VRK1Q99986 CDC14B-202ENST00000375241 5589 ntAPPRIS P2 TSL 1 (best) BASIC20.6■□□□□ 0.89
VRK1Q99986 ST7L-206ENST00000369666 1815 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
VRK1Q99986 VSTM2L-202ENST00000373461 1959 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
VRK1Q99986 TMEM191C-206ENST00000432134 1129 ntAPPRIS ALT2 TSL 5 BASIC20.6■□□□□ 0.89
VRK1Q99986 C1orf232-201ENST00000634842 643 ntAPPRIS P5 TSL 5 BASIC20.6■□□□□ 0.89
VRK1Q99986 ERGIC1-202ENST00000393784 2881 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
VRK1Q99986 PLD4-201ENST00000392593 6515 ntAPPRIS P3 TSL 1 (best) BASIC20.6■□□□□ 0.89
VRK1Q99986 AC092803.2-201ENST00000564287 1899 ntBASIC20.6■□□□□ 0.89
VRK1Q99986 ADAM22-209ENST00000439864 2576 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
VRK1Q99986 BMP2K-204ENST00000502871 3195 ntAPPRIS P3 TSL 1 (best) BASIC20.59■□□□□ 0.89
VRK1Q99986 FBXL8-201ENST00000258200 1658 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
VRK1Q99986 FKBP1B-202ENST00000380991 1010 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
VRK1Q99986 H2AFY-204ENST00000423969 924 ntTSL 2 BASIC20.59■□□□□ 0.89
VRK1Q99986 HERC2P9-201ENST00000507787 1023 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
VRK1Q99986 AC009511.2-201ENST00000545904 679 ntTSL 2 BASIC20.59■□□□□ 0.89
VRK1Q99986 AC138207.2-201ENST00000583377 492 ntTSL 2 BASIC20.59■□□□□ 0.89
VRK1Q99986 TSGA13-204ENST00000456951 2046 ntAPPRIS P2 TSL 2 BASIC20.59■□□□□ 0.89
VRK1Q99986 AGBL5-201ENST00000323064 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
VRK1Q99986 ANKRD9-204ENST00000559651 1444 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
VRK1Q99986 CACNA1H-210ENST00000638323 8048 ntAPPRIS ALT2 TSL 5 BASIC20.58■□□□□ 0.89
VRK1Q99986 ARRDC2-202ENST00000379656 2528 ntTSL 2 BASIC20.58■□□□□ 0.89
VRK1Q99986 STOML1-202ENST00000316911 1891 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
VRK1Q99986 NAT14-201ENST00000205194 1536 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
VRK1Q99986 MTERF3-201ENST00000287025 1409 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
VRK1Q99986 ID4-201ENST00000378700 2344 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
VRK1Q99986 ATAD3A-203ENST00000378756 2492 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
VRK1Q99986 GUCD1-207ENST00000447813 895 ntTSL 3 BASIC20.57■□□□□ 0.88
VRK1Q99986 FZD8-201ENST00000374694 4030 ntAPPRIS P1 BASIC20.56■□□□□ 0.88
VRK1Q99986 AGAP3-201ENST00000335367 2675 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
VRK1Q99986 C19orf47-202ENST00000392035 2126 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
VRK1Q99986 RINL-208ENST00000598904 1846 ntAPPRIS P3 TSL 5 BASIC20.56■□□□□ 0.88
VRK1Q99986 PKNOX2-AS1-201ENST00000532316 586 ntTSL 3 BASIC20.56■□□□□ 0.88
VRK1Q99986 HAGHL-205ENST00000561546 1041 ntTSL 2 BASIC20.56■□□□□ 0.88
VRK1Q99986 PVT1_1.1-201ENST00000615125 194 ntBASIC20.56■□□□□ 0.88
VRK1Q99986 GAL3ST2-201ENST00000192314 1370 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
VRK1Q99986 SLC25A10-202ENST00000350690 1885 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
VRK1Q99986 DYRK2-203ENST00000393555 2209 ntAPPRIS ALT1 TSL 1 (best) BASIC20.55■□□□□ 0.88
VRK1Q99986 EGFL8-220ENST00000395512 1312 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
VRK1Q99986 MYBL1-204ENST00000522677 5192 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
VRK1Q99986 SERP2-201ENST00000379179 784 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
VRK1Q99986 MDK-206ENST00000407067 1026 ntAPPRIS P2 TSL 1 (best) BASIC20.55■□□□□ 0.88
VRK1Q99986 AC016910.1-201ENST00000422799 1046 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
VRK1Q99986 LMAN2-208ENST00000515209 1149 ntAPPRIS ALT2 TSL 3 BASIC20.55■□□□□ 0.88
VRK1Q99986 PTRH1-208ENST00000543175 814 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
VRK1Q99986 AC091230.1-202ENST00000564823 5356 ntTSL 2 BASIC20.55■□□□□ 0.88
VRK1Q99986 RCCD1-206ENST00000556618 1556 ntAPPRIS P2 TSL 5 BASIC20.55■□□□□ 0.88
VRK1Q99986 CASP9-201ENST00000333868 2019 ntAPPRIS P2 TSL 1 (best) BASIC20.54■□□□□ 0.88
VRK1Q99986 SLC12A2-201ENST00000262461 6885 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
VRK1Q99986 SLC16A11-202ENST00000447225 1779 ntAPPRIS ALT2 TSL 5 BASIC20.54■□□□□ 0.88
VRK1Q99986 C21orf2-202ENST00000339818 2233 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
VRK1Q99986 PVT1-212ENST00000521951 1535 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
VRK1Q99986 NAXE-203ENST00000368235 1125 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
VRK1Q99986 MTX2-204ENST00000443241 799 ntTSL 3 BASIC20.54■□□□□ 0.88
VRK1Q99986 HSBP1L1-201ENST00000451882 771 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
VRK1Q99986 NKX2-5-204ENST00000521848 1027 ntTSL 2 BASIC20.54■□□□□ 0.88
VRK1Q99986 MAGI2-201ENST00000354212 6880 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
VRK1Q99986 KREMEN2-205ENST00000575769 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
VRK1Q99986 RFWD2-201ENST00000308769 2124 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
VRK1Q99986 CNNM2-201ENST00000369875 2059 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
VRK1Q99986 ZFAND2B-201ENST00000289528 1314 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
VRK1Q99986 MAPK9-202ENST00000347470 1509 ntTSL 5 BASIC20.53■□□□□ 0.88
VRK1Q99986 GRK4-204ENST00000503518 2136 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
VRK1Q99986 NR2F6-201ENST00000291442 2404 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
VRK1Q99986 RBFA-201ENST00000262197 1219 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
VRK1Q99986 FAM120C-203ENST00000477084 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
VRK1Q99986 AL451085.2-201ENST00000605085 799 ntBASIC20.53■□□□□ 0.88
VRK1Q99986 SLC39A2-201ENST00000298681 1379 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
VRK1Q99986 SNHG7-204ENST00000447221 2157 ntTSL 2 BASIC20.53■□□□□ 0.88
VRK1Q99986 CEBPA-AS1-201ENST00000592982 2198 ntBASIC20.53■□□□□ 0.88
VRK1Q99986 ANKS3-203ENST00000450067 2272 ntTSL 5 BASIC20.53■□□□□ 0.88
VRK1Q99986 TMEM64-203ENST00000458549 4997 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
VRK1Q99986 FJX1-201ENST00000317811 2450 ntAPPRIS P1 BASIC20.52■□□□□ 0.88
VRK1Q99986 VSTM2A-202ENST00000402613 1076 ntTSL 2 BASIC20.52■□□□□ 0.88
VRK1Q99986 RPS2P7-201ENST00000447334 885 ntBASIC20.52■□□□□ 0.88
VRK1Q99986 AC053527.1-201ENST00000502790 685 ntTSL 3 BASIC20.52■□□□□ 0.88
VRK1Q99986 ZNF606-203ENST00000547121 1196 ntTSL 2 BASIC20.52■□□□□ 0.88
VRK1Q99986 AC087393.1-201ENST00000582896 145 ntBASIC20.52■□□□□ 0.88
VRK1Q99986 CPSF4-207ENST00000451876 1644 ntTSL 5 BASIC20.52■□□□□ 0.88
VRK1Q99986 CBLN2-209ENST00000585159 2406 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
VRK1Q99986 MPST-203ENST00000401419 1345 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
VRK1Q99986 RAX2-202ENST00000555978 2145 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
VRK1Q99986 FAM124A-204ENST00000615498 2383 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
VRK1Q99986 NPTXR-201ENST00000333039 5784 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
VRK1Q99986 FUS-202ENST00000380244 1818 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
VRK1Q99986 GALR2-201ENST00000329003 1364 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
VRK1Q99986 AP2M1-202ENST00000382456 2091 ntAPPRIS ALT1 TSL 1 (best) BASIC20.51■□□□□ 0.87
VRK1Q99986 AC103834.1-201ENST00000520383 144 ntBASIC20.51■□□□□ 0.87
VRK1Q99986 AC011448.1-201ENST00000555938 1100 ntAPPRIS P1 TSL 2 BASIC20.51■□□□□ 0.87
VRK1Q99986 SIX2-201ENST00000303077 2205 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
VRK1Q99986 BIN1-207ENST00000357970 2497 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
VRK1Q99986 FBXL6-201ENST00000331890 1785 ntAPPRIS P3 TSL 1 (best) BASIC20.51■□□□□ 0.87
VRK1Q99986 PCOLCE2-201ENST00000295992 2021 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
VRK1Q99986 NRG2-203ENST00000340391 1944 ntTSL 5 BASIC20.51■□□□□ 0.87
VRK1Q99986 LRFN4-202ENST00000393952 1550 ntTSL 5 BASIC20.51■□□□□ 0.87
VRK1Q99986 PCYT2-204ENST00000570388 1474 ntTSL 2 BASIC20.5■□□□□ 0.87
VRK1Q99986 NPEPL1-201ENST00000356091 2378 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
VRK1Q99986 RBFOX2-209ENST00000438146 1356 ntAPPRIS P3 TSL 1 (best) BASIC20.5■□□□□ 0.87
VRK1Q99986 CTDSPL-206ENST00000443503 4640 ntAPPRIS ALT1 TSL 1 (best) BASIC20.5■□□□□ 0.87
VRK1Q99986 BMP6-201ENST00000283147 2780 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 16.2 ms