Protein–RNA interactions for Protein: Q96SZ6

CDK5RAP1, CDK5 regulatory subunit-associated protein 1, humanhuman

Known RBP Predictions only

Length 601 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP1Q96SZ6 TMIE-201ENST00000326431 1824 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
CDK5RAP1Q96SZ6 ARL4D-201ENST00000320033 1612 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
CDK5RAP1Q96SZ6 KLC1-225ENST00000557575 2188 ntTSL 5 BASIC24.6■■□□□ 1.53
CDK5RAP1Q96SZ6 MAD2L2-201ENST00000235310 1860 ntAPPRIS P1 TSL 2 BASIC24.6■■□□□ 1.53
CDK5RAP1Q96SZ6 CIRBP-216ENST00000588090 1459 ntAPPRIS P3 TSL 3 BASIC24.6■■□□□ 1.53
CDK5RAP1Q96SZ6 PRELID1-201ENST00000303204 1261 ntAPPRIS P1 TSL 1 (best) BASIC24.6■■□□□ 1.53
CDK5RAP1Q96SZ6 C11orf80-204ENST00000525908 2135 ntAPPRIS P3 TSL 2 BASIC24.6■■□□□ 1.53
CDK5RAP1Q96SZ6 LSM7-204ENST00000587502 575 ntTSL 1 (best) BASIC24.6■■□□□ 1.53
CDK5RAP1Q96SZ6 LAT-217ENST00000630764 610 ntAPPRIS ALT2 TSL 5 BASIC24.6■■□□□ 1.53
CDK5RAP1Q96SZ6 OXSR1-203ENST00000446845 1908 ntTSL 5 BASIC24.6■■□□□ 1.53
CDK5RAP1Q96SZ6 PORCN-203ENST00000359882 1877 ntAPPRIS ALT1 TSL 5 BASIC24.6■■□□□ 1.53
CDK5RAP1Q96SZ6 MADCAM1-202ENST00000346144 1309 ntAPPRIS ALT2 TSL 1 (best) BASIC24.6■■□□□ 1.53
CDK5RAP1Q96SZ6 ANKS3-204ENST00000585773 1946 ntTSL 2 BASIC24.59■■□□□ 1.53
CDK5RAP1Q96SZ6 TMCO6-201ENST00000252100 1834 ntTSL 1 (best) BASIC24.59■■□□□ 1.53
CDK5RAP1Q96SZ6 LURAP1L-201ENST00000319264 1753 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
CDK5RAP1Q96SZ6 PPP4C-214ENST00000627746 1301 ntTSL 5 BASIC24.59■■□□□ 1.53
CDK5RAP1Q96SZ6 SAC3D1-201ENST00000398846 1566 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
CDK5RAP1Q96SZ6 PDSS1-201ENST00000376215 1626 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.53
CDK5RAP1Q96SZ6 HES6-204ENST00000409182 863 ntTSL 2 BASIC24.58■■□□□ 1.53
CDK5RAP1Q96SZ6 GNPTAB-201ENST00000299314 5701 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.53
CDK5RAP1Q96SZ6 PLEKHO1-202ENST00000369126 1809 ntTSL 1 (best) BASIC24.58■■□□□ 1.53
CDK5RAP1Q96SZ6 SNHG7-204ENST00000447221 2157 ntTSL 2 BASIC24.57■■□□□ 1.52
CDK5RAP1Q96SZ6 FLJ37453-201ENST00000317122 2473 ntTSL 2 BASIC24.57■■□□□ 1.52
CDK5RAP1Q96SZ6 BTBD6-205ENST00000536364 1973 ntAPPRIS P2 TSL 5 BASIC24.57■■□□□ 1.52
CDK5RAP1Q96SZ6 HSPE1-201ENST00000233893 950 ntAPPRIS P1 TSL 1 (best) BASIC24.57■■□□□ 1.52
CDK5RAP1Q96SZ6 EVA1B-201ENST00000270824 1054 ntAPPRIS P1 TSL 2 BASIC24.57■■□□□ 1.52
CDK5RAP1Q96SZ6 GBX1-201ENST00000297537 1092 ntAPPRIS P1 TSL 1 (best) BASIC24.57■■□□□ 1.52
CDK5RAP1Q96SZ6 TMEM54-201ENST00000329151 871 ntTSL 1 (best) BASIC24.57■■□□□ 1.52
CDK5RAP1Q96SZ6 MDK-203ENST00000395566 828 ntAPPRIS P2 TSL 1 (best) BASIC24.57■■□□□ 1.52
CDK5RAP1Q96SZ6 BX664725.1-201ENST00000438252 379 ntBASIC24.57■■□□□ 1.52
CDK5RAP1Q96SZ6 ST3GAL6-AS1-203ENST00000488132 769 ntTSL 3 BASIC24.57■■□□□ 1.52
CDK5RAP1Q96SZ6 FHL2-203ENST00000358129 1578 ntTSL 5 BASIC24.57■■□□□ 1.52
CDK5RAP1Q96SZ6 PTPMT1-205ENST00000534775 1611 ntTSL 1 (best) BASIC24.57■■□□□ 1.52
CDK5RAP1Q96SZ6 GTPBP3-202ENST00000358792 1951 ntAPPRIS P4 TSL 2 BASIC24.56■■□□□ 1.52
CDK5RAP1Q96SZ6 LRRC14B-201ENST00000328278 1573 ntAPPRIS P1 TSL 1 (best) BASIC24.56■■□□□ 1.52
CDK5RAP1Q96SZ6 AC009531.1-201ENST00000442323 580 ntTSL 4 BASIC24.56■■□□□ 1.52
CDK5RAP1Q96SZ6 ST20-MTHFS-201ENST00000479961 859 ntAPPRIS P1 TSL 3 BASIC24.56■■□□□ 1.52
CDK5RAP1Q96SZ6 CLIC3-203ENST00000494426 1017 ntAPPRIS P1 TSL 1 (best) BASIC24.56■■□□□ 1.52
CDK5RAP1Q96SZ6 PRR7-204ENST00000510492 1285 ntAPPRIS P1 TSL 1 (best) BASIC24.56■■□□□ 1.52
CDK5RAP1Q96SZ6 SDS-201ENST00000257549 1606 ntAPPRIS P1 TSL 2 BASIC24.56■■□□□ 1.52
CDK5RAP1Q96SZ6 PKIG-206ENST00000372892 1338 ntAPPRIS P1 TSL 2 BASIC24.56■■□□□ 1.52
CDK5RAP1Q96SZ6 FKBP8-213ENST00000608443 1849 ntAPPRIS P3 TSL 1 (best) BASIC24.56■■□□□ 1.52
CDK5RAP1Q96SZ6 CCDC106-202ENST00000586790 2162 ntAPPRIS P1 TSL 1 (best) BASIC24.56■■□□□ 1.52
CDK5RAP1Q96SZ6 FBXL8-201ENST00000258200 1658 ntAPPRIS P1 TSL 1 (best) BASIC24.56■■□□□ 1.52
CDK5RAP1Q96SZ6 ACSS1-202ENST00000376726 2244 ntTSL 2 BASIC24.55■■□□□ 1.52
CDK5RAP1Q96SZ6 MROH6-210ENST00000533679 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC24.55■■□□□ 1.52
CDK5RAP1Q96SZ6 TRIM14-203ENST00000375098 1792 ntAPPRIS P1 TSL 2 BASIC24.55■■□□□ 1.52
CDK5RAP1Q96SZ6 MRPL4-207ENST00000590669 1423 ntTSL 1 (best) BASIC24.55■■□□□ 1.52
CDK5RAP1Q96SZ6 IGFBP3-202ENST00000381083 1050 ntAPPRIS ALT1 TSL 5 BASIC24.55■■□□□ 1.52
CDK5RAP1Q96SZ6 AC137630.3-201ENST00000607245 391 ntBASIC24.55■■□□□ 1.52
CDK5RAP1Q96SZ6 GAK-223ENST00000628912 497 ntTSL 5 BASIC24.55■■□□□ 1.52
CDK5RAP1Q96SZ6 PLPPR3-201ENST00000359894 2387 ntAPPRIS P3 TSL 1 (best) BASIC24.55■■□□□ 1.52
CDK5RAP1Q96SZ6 GATA4-207ENST00000532059 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC24.55■■□□□ 1.52
CDK5RAP1Q96SZ6 NPHS2-202ENST00000367616 1670 ntTSL 1 (best) BASIC24.54■■□□□ 1.52
CDK5RAP1Q96SZ6 ADAMTS13-203ENST00000371910 1074 ntTSL 1 (best) BASIC24.54■■□□□ 1.52
CDK5RAP1Q96SZ6 KRT125P-201ENST00000546827 989 ntBASIC24.54■■□□□ 1.52
CDK5RAP1Q96SZ6 MIR4281-201ENST00000580852 62 ntBASIC24.54■■□□□ 1.52
CDK5RAP1Q96SZ6 MSANTD2-201ENST00000239614 2495 ntTSL 2 BASIC24.54■■□□□ 1.52
CDK5RAP1Q96SZ6 GPR160-201ENST00000355897 2039 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
CDK5RAP1Q96SZ6 TMEM104-205ENST00000582773 1740 ntTSL 2 BASIC24.53■■□□□ 1.52
CDK5RAP1Q96SZ6 ANAPC13-201ENST00000354910 1209 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
CDK5RAP1Q96SZ6 EBPL-205ENST00000378284 967 ntTSL 1 (best) BASIC24.53■■□□□ 1.52
CDK5RAP1Q96SZ6 CENPX-202ENST00000392359 805 ntAPPRIS P1 TSL 2 BASIC24.53■■□□□ 1.52
CDK5RAP1Q96SZ6 OR2A1-AS1-204ENST00000470435 602 ntBASIC24.53■■□□□ 1.52
CDK5RAP1Q96SZ6 TMEM260-202ENST00000538838 1638 ntTSL 1 (best) BASIC24.53■■□□□ 1.52
CDK5RAP1Q96SZ6 RABEP2-203ENST00000544477 1645 ntTSL 2 BASIC24.53■■□□□ 1.52
CDK5RAP1Q96SZ6 PEA15-201ENST00000360472 2471 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
CDK5RAP1Q96SZ6 LYPLA1-215ENST00000618914 2482 ntTSL 5 BASIC24.53■■□□□ 1.52
CDK5RAP1Q96SZ6 TMEM266-201ENST00000388942 2520 ntAPPRIS P1 TSL 5 BASIC24.53■■□□□ 1.52
CDK5RAP1Q96SZ6 HOXC-AS1-201ENST00000505700 548 ntTSL 2 BASIC24.52■■□□□ 1.52
CDK5RAP1Q96SZ6 CTDSP2-203ENST00000547701 988 ntTSL 1 (best) BASIC24.52■■□□□ 1.52
CDK5RAP1Q96SZ6 LINC01925-201ENST00000579492 500 ntTSL 5 BASIC24.52■■□□□ 1.52
CDK5RAP1Q96SZ6 HMCES-204ENST00000502878 1952 ntAPPRIS P1 TSL 1 (best) BASIC24.52■■□□□ 1.52
CDK5RAP1Q96SZ6 KAT8-202ENST00000448516 1789 ntTSL 1 (best) BASIC24.52■■□□□ 1.52
CDK5RAP1Q96SZ6 PNMT-201ENST00000269582 1253 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
CDK5RAP1Q96SZ6 RAB32-201ENST00000367495 1217 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
CDK5RAP1Q96SZ6 AC239859.2-201ENST00000444165 318 ntBASIC24.51■■□□□ 1.51
CDK5RAP1Q96SZ6 TIE1-210ENST00000538015 1140 ntTSL 1 (best) BASIC24.51■■□□□ 1.51
CDK5RAP1Q96SZ6 MYL12B-203ENST00000581193 1249 ntAPPRIS P1 TSL 3 BASIC24.51■■□□□ 1.51
CDK5RAP1Q96SZ6 MIR663AHG-227ENST00000608084 765 ntTSL 5 BASIC24.51■■□□□ 1.51
CDK5RAP1Q96SZ6 POU2F2-208ENST00000529952 1716 ntAPPRIS ALT2 TSL 1 (best) BASIC24.51■■□□□ 1.51
CDK5RAP1Q96SZ6 YWHAH-201ENST00000248975 1825 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
CDK5RAP1Q96SZ6 RRAS2-201ENST00000256196 1516 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
CDK5RAP1Q96SZ6 ZNF784-202ENST00000591479 1559 ntTSL 1 (best) BASIC24.5■■□□□ 1.51
CDK5RAP1Q96SZ6 AC090877.2-201ENST00000558441 1738 ntBASIC24.5■■□□□ 1.51
CDK5RAP1Q96SZ6 ZEB1-AS1-205ENST00000605946 382 ntTSL 5 BASIC24.5■■□□□ 1.51
CDK5RAP1Q96SZ6 MMP28-203ENST00000612672 1092 ntTSL 1 (best) BASIC24.5■■□□□ 1.51
CDK5RAP1Q96SZ6 CREM-210ENST00000374721 2020 ntTSL 5 BASIC24.5■■□□□ 1.51
CDK5RAP1Q96SZ6 GNAL-201ENST00000269162 1722 ntAPPRIS P1 TSL 2 BASIC24.49■■□□□ 1.51
CDK5RAP1Q96SZ6 MYPOP-201ENST00000322217 1890 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
CDK5RAP1Q96SZ6 PPP1CC-206ENST00000550991 1882 ntTSL 2 BASIC24.49■■□□□ 1.51
CDK5RAP1Q96SZ6 AQP1-202ENST00000409611 1140 ntTSL 1 (best) BASIC24.49■■□□□ 1.51
CDK5RAP1Q96SZ6 AC055876.1-201ENST00000430589 895 ntTSL 2 BASIC24.49■■□□□ 1.51
CDK5RAP1Q96SZ6 MCRIP1-210ENST00000576431 577 ntTSL 5 BASIC24.49■■□□□ 1.51
CDK5RAP1Q96SZ6 NEUROG3-201ENST00000242462 1376 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
CDK5RAP1Q96SZ6 ARRB2-210ENST00000572457 1660 ntTSL 5 BASIC24.49■■□□□ 1.51
CDK5RAP1Q96SZ6 FCRLB-205ENST00000367948 1977 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
CDK5RAP1Q96SZ6 POU3F3-201ENST00000361360 3064 ntAPPRIS P1 BASIC24.48■■□□□ 1.51
CDK5RAP1Q96SZ6 ZFAND5-202ENST00000343431 1073 ntAPPRIS P1 TSL 5 BASIC24.48■■□□□ 1.51
CDK5RAP1Q96SZ6 HTRA2-202ENST00000352222 1450 ntTSL 1 (best) BASIC24.48■■□□□ 1.51
Retrieved 100 of 98,524 protein–RNA pairs in 37.3 ms