Protein–RNA interactions for Protein: Q96NT5

SLC46A1, Proton-coupled folate transporter, humanhuman

Predictions only

Length 459 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC46A1Q96NT5 MIR4281-201ENST00000580852 62 ntBASIC22.72■■□□□ 1.23
SLC46A1Q96NT5 GDF6-202ENST00000620978 973 ntTSL 1 (best) BASIC22.72■■□□□ 1.23
SLC46A1Q96NT5 C19orf47-202ENST00000392035 2126 ntAPPRIS ALT2 TSL 1 (best) BASIC22.72■■□□□ 1.23
SLC46A1Q96NT5 EPM2A-208ENST00000618445 1694 ntTSL 1 (best) BASIC22.71■■□□□ 1.23
SLC46A1Q96NT5 SLC35B2-204ENST00000537814 1715 ntTSL 2 BASIC22.71■■□□□ 1.23
SLC46A1Q96NT5 LCNL1-201ENST00000408973 1839 ntAPPRIS P1 TSL 2 BASIC22.71■■□□□ 1.23
SLC46A1Q96NT5 RASSF5-204ENST00000580449 1932 ntTSL 1 (best) BASIC22.71■■□□□ 1.23
SLC46A1Q96NT5 KRTAP5-1-201ENST00000382171 942 ntAPPRIS P1 BASIC22.71■■□□□ 1.23
SLC46A1Q96NT5 AL445237.1-202ENST00000604581 425 ntTSL 5 BASIC22.71■■□□□ 1.23
SLC46A1Q96NT5 AC010997.5-201ENST00000609182 354 ntBASIC22.71■■□□□ 1.23
SLC46A1Q96NT5 LRRC61-205ENST00000493307 1456 ntAPPRIS P1 TSL 5 BASIC22.71■■□□□ 1.23
SLC46A1Q96NT5 BCAP31-207ENST00000458587 1810 ntTSL 1 (best) BASIC22.71■■□□□ 1.23
SLC46A1Q96NT5 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC22.7■■□□□ 1.22
SLC46A1Q96NT5 AL117332.1-201ENST00000622628 974 ntBASIC22.7■■□□□ 1.22
SLC46A1Q96NT5 HOMER3-203ENST00000433218 1418 ntAPPRIS ALT1 TSL 5 BASIC22.7■■□□□ 1.22
SLC46A1Q96NT5 LRRC14B-201ENST00000328278 1573 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
SLC46A1Q96NT5 RABL6-204ENST00000371671 1580 ntAPPRIS ALT2 TSL 1 (best) BASIC22.7■■□□□ 1.22
SLC46A1Q96NT5 DHFR-203ENST00000505337 1719 ntAPPRIS P1 TSL 2 BASIC22.7■■□□□ 1.22
SLC46A1Q96NT5 KANSL2-215ENST00000553086 1830 ntTSL 5 BASIC22.7■■□□□ 1.22
SLC46A1Q96NT5 LRFN4-202ENST00000393952 1550 ntTSL 5 BASIC22.69■■□□□ 1.22
SLC46A1Q96NT5 IL15RA-209ENST00000397255 759 ntAPPRIS ALT2 TSL 5 BASIC22.69■■□□□ 1.22
SLC46A1Q96NT5 IL15RA-216ENST00000530685 660 ntTSL 5 BASIC22.69■■□□□ 1.22
SLC46A1Q96NT5 MIR3621-201ENST00000580529 85 ntBASIC22.69■■□□□ 1.22
SLC46A1Q96NT5 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC22.69■■□□□ 1.22
SLC46A1Q96NT5 AC093762.1-201ENST00000641981 837 ntAPPRIS P1 BASIC22.69■■□□□ 1.22
SLC46A1Q96NT5 RAB40C-204ENST00000538492 2569 ntAPPRIS P1 TSL 2 BASIC22.69■■□□□ 1.22
SLC46A1Q96NT5 CTBP1-201ENST00000290921 2297 ntTSL 1 (best) BASIC22.69■■□□□ 1.22
SLC46A1Q96NT5 SLC25A10-202ENST00000350690 1885 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
SLC46A1Q96NT5 R3HCC1-201ENST00000265806 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC22.68■■□□□ 1.22
SLC46A1Q96NT5 HMX2-201ENST00000339992 1628 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
SLC46A1Q96NT5 PPP1R3F-205ENST00000495799 1537 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
SLC46A1Q96NT5 ZNF428-201ENST00000300811 1412 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
SLC46A1Q96NT5 MRPL4-207ENST00000590669 1423 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
SLC46A1Q96NT5 SNTB1-202ENST00000517992 2273 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
SLC46A1Q96NT5 TMEM80-201ENST00000397510 1094 ntAPPRIS P2 TSL 5 BASIC22.68■■□□□ 1.22
SLC46A1Q96NT5 PPP1R14A-205ENST00000591585 949 ntTSL 2 BASIC22.68■■□□□ 1.22
SLC46A1Q96NT5 CDC16-211ENST00000628084 2058 ntTSL 5 BASIC22.68■■□□□ 1.22
SLC46A1Q96NT5 TTC3-225ENST00000540756 2025 ntTSL 2 BASIC22.68■■□□□ 1.22
SLC46A1Q96NT5 DGAT1-201ENST00000332324 1473 ntTSL 5 BASIC22.67■■□□□ 1.22
SLC46A1Q96NT5 NXPH4-201ENST00000349394 1804 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
SLC46A1Q96NT5 YPEL1-202ENST00000403503 466 ntTSL 3 BASIC22.67■■□□□ 1.22
SLC46A1Q96NT5 AC009531.1-201ENST00000442323 580 ntTSL 4 BASIC22.67■■□□□ 1.22
SLC46A1Q96NT5 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC22.67■■□□□ 1.22
SLC46A1Q96NT5 MIR6724-1-201ENST00000616420 92 ntBASIC22.67■■□□□ 1.22
SLC46A1Q96NT5 MIR6724-2-201ENST00000616483 92 ntBASIC22.67■■□□□ 1.22
SLC46A1Q96NT5 MIR6724-4-201ENST00000617390 92 ntBASIC22.67■■□□□ 1.22
SLC46A1Q96NT5 MIR6724-3-201ENST00000622482 92 ntBASIC22.67■■□□□ 1.22
SLC46A1Q96NT5 Z98883.1-202ENST00000635107 1289 ntTSL 5 BASIC22.67■■□□□ 1.22
SLC46A1Q96NT5 AC005551.1-201ENST00000641816 493 ntAPPRIS P1 BASIC22.67■■□□□ 1.22
SLC46A1Q96NT5 U2AF1-204ENST00000459639 1675 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
SLC46A1Q96NT5 U2AF1L5-204ENST00000623375 1675 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
SLC46A1Q96NT5 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC22.67■■□□□ 1.22
SLC46A1Q96NT5 TAZ-213ENST00000601016 1889 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
SLC46A1Q96NT5 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC22.66■■□□□ 1.22
SLC46A1Q96NT5 MRAP2-201ENST00000257776 2153 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
SLC46A1Q96NT5 FBXL6-201ENST00000331890 1785 ntAPPRIS P3 TSL 1 (best) BASIC22.66■■□□□ 1.22
SLC46A1Q96NT5 HOMER3-201ENST00000221222 1384 ntAPPRIS ALT1 TSL 5 BASIC22.66■■□□□ 1.22
SLC46A1Q96NT5 PYCARD-202ENST00000350605 696 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
SLC46A1Q96NT5 FAM228B-208ENST00000613899 1238 ntAPPRIS ALT2 TSL 1 (best) BASIC22.66■■□□□ 1.22
SLC46A1Q96NT5 SLC39A3-201ENST00000269740 1502 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
SLC46A1Q96NT5 NRM-201ENST00000259953 1755 ntAPPRIS P2 TSL 2 BASIC22.66■■□□□ 1.22
SLC46A1Q96NT5 KCNJ4-201ENST00000303592 2065 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
SLC46A1Q96NT5 PRSS21-201ENST00000005995 1101 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
SLC46A1Q96NT5 AC110285.6-201ENST00000617652 491 ntBASIC22.65■■□□□ 1.22
SLC46A1Q96NT5 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC22.65■■□□□ 1.22
SLC46A1Q96NT5 TAZ-216ENST00000613002 1485 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
SLC46A1Q96NT5 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC22.64■■□□□ 1.21
SLC46A1Q96NT5 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC22.64■■□□□ 1.21
SLC46A1Q96NT5 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC22.64■■□□□ 1.21
SLC46A1Q96NT5 CDKN2A-208ENST00000498124 880 ntTSL 1 (best) BASIC22.64■■□□□ 1.21
SLC46A1Q96NT5 TMC6-218ENST00000591436 1155 ntTSL 1 (best) BASIC22.64■■□□□ 1.21
SLC46A1Q96NT5 MTDHP2-201ENST00000601468 714 ntBASIC22.64■■□□□ 1.21
SLC46A1Q96NT5 AL356740.2-201ENST00000601559 647 ntBASIC22.64■■□□□ 1.21
SLC46A1Q96NT5 HDGF-201ENST00000357325 2380 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
SLC46A1Q96NT5 CIRBP-216ENST00000588090 1459 ntAPPRIS P3 TSL 3 BASIC22.63■■□□□ 1.21
SLC46A1Q96NT5 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC22.63■■□□□ 1.21
SLC46A1Q96NT5 WBP1-203ENST00000409737 1110 ntAPPRIS ALT1 TSL 5 BASIC22.63■■□□□ 1.21
SLC46A1Q96NT5 FGD5-AS1-204ENST00000430166 1184 ntTSL 2 BASIC22.63■■□□□ 1.21
SLC46A1Q96NT5 AC005837.3-201ENST00000612163 286 ntBASIC22.63■■□□□ 1.21
SLC46A1Q96NT5 H2AFB1-201ENST00000620016 587 ntAPPRIS P1 BASIC22.63■■□□□ 1.21
SLC46A1Q96NT5 CASP9-202ENST00000348549 1621 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
SLC46A1Q96NT5 EXOC3-209ENST00000512944 2825 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
SLC46A1Q96NT5 DAZAP1-202ENST00000336761 2290 ntTSL 5 BASIC22.62■■□□□ 1.21
SLC46A1Q96NT5 GATA4-209ENST00000622443 1982 ntTSL 5 BASIC22.62■■□□□ 1.21
SLC46A1Q96NT5 EMC9-201ENST00000216799 835 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
SLC46A1Q96NT5 LSM4-201ENST00000252816 986 ntTSL 2 BASIC22.62■■□□□ 1.21
SLC46A1Q96NT5 HES4-201ENST00000304952 899 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
SLC46A1Q96NT5 CCKBR-201ENST00000334619 2121 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
SLC46A1Q96NT5 AL357078.1-201ENST00000448344 310 ntTSL 4 BASIC22.62■■□□□ 1.21
SLC46A1Q96NT5 TOLLIP-208ENST00000527938 549 ntTSL 4 BASIC22.62■■□□□ 1.21
SLC46A1Q96NT5 MCRIP1-210ENST00000576431 577 ntTSL 5 BASIC22.62■■□□□ 1.21
SLC46A1Q96NT5 AL117336.3-202ENST00000605499 489 ntTSL 3 BASIC22.62■■□□□ 1.21
SLC46A1Q96NT5 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC22.62■■□□□ 1.21
SLC46A1Q96NT5 C12orf75-207ENST00000552457 689 ntTSL 5 BASIC22.61■■□□□ 1.21
SLC46A1Q96NT5 RNF225-201ENST00000601382 990 ntAPPRIS P1 BASIC22.61■■□□□ 1.21
SLC46A1Q96NT5 HTRA1-201ENST00000368984 2120 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
SLC46A1Q96NT5 TMUB1-203ENST00000462940 1549 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
SLC46A1Q96NT5 FAM107B-205ENST00000378467 2374 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
SLC46A1Q96NT5 LRRC1-201ENST00000370882 808 ntTSL 3 BASIC22.6■■□□□ 1.21
SLC46A1Q96NT5 AC011551.1-201ENST00000614101 683 ntBASIC22.6■■□□□ 1.21
Retrieved 100 of 98,524 protein–RNA pairs in 30.2 ms