Protein–RNA interactions for Protein: Q96CU9

FOXRED1, FAD-dependent oxidoreductase domain-containing protein 1, humanhuman

Predicted RBP Predictions only

Length 486 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXRED1Q96CU9 PCMT1-202ENST00000367380 1628 ntTSL 2 BASIC20.4■□□□□ 0.86
FOXRED1Q96CU9 INPP5J-206ENST00000404453 1613 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
FOXRED1Q96CU9 NREP-216ENST00000508870 540 ntAPPRIS P1 TSL 4 BASIC20.4■□□□□ 0.86
FOXRED1Q96CU9 GRPEL2-204ENST00000513661 546 ntTSL 2 BASIC20.4■□□□□ 0.86
FOXRED1Q96CU9 PCMT1-211ENST00000544496 1628 ntTSL 2 BASIC20.4■□□□□ 0.86
FOXRED1Q96CU9 TAZ-216ENST00000613002 1485 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
FOXRED1Q96CU9 SLBP-206ENST00000489418 1977 ntAPPRIS P2 TSL 1 (best) BASIC20.39■□□□□ 0.86
FOXRED1Q96CU9 DNAJB11-201ENST00000265028 1688 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
FOXRED1Q96CU9 SAC3D1-201ENST00000398846 1566 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
FOXRED1Q96CU9 ADAM22-209ENST00000439864 2576 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
FOXRED1Q96CU9 LSM7-201ENST00000252622 529 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
FOXRED1Q96CU9 RPARP-AS1-205ENST00000596045 431 ntTSL 3 BASIC20.39■□□□□ 0.85
FOXRED1Q96CU9 R3HDM4-208ENST00000626716 138 ntTSL 5 BASIC20.39■□□□□ 0.85
FOXRED1Q96CU9 FJX1-201ENST00000317811 2450 ntAPPRIS P1 BASIC20.39■□□□□ 0.85
FOXRED1Q96CU9 CUEDC1-202ENST00000407144 2190 ntAPPRIS P1 TSL 5 BASIC20.39■□□□□ 0.85
FOXRED1Q96CU9 GRK4-204ENST00000503518 2136 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
FOXRED1Q96CU9 ALDH16A1-203ENST00000540132 2174 ntTSL 2 BASIC20.38■□□□□ 0.85
FOXRED1Q96CU9 BAX-202ENST00000345358 793 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
FOXRED1Q96CU9 TPT1-202ENST00000379055 948 ntTSL 2 BASIC20.38■□□□□ 0.85
FOXRED1Q96CU9 BOK-AS1-201ENST00000434306 643 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
FOXRED1Q96CU9 KLC3-202ENST00000470402 1820 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
FOXRED1Q96CU9 ATOH7-201ENST00000373673 1480 ntAPPRIS P1 BASIC20.37■□□□□ 0.85
FOXRED1Q96CU9 HSD11B2-201ENST00000326152 1900 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
FOXRED1Q96CU9 TTC9-201ENST00000256367 5217 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
FOXRED1Q96CU9 BMP2K-204ENST00000502871 3195 ntAPPRIS P3 TSL 1 (best) BASIC20.37■□□□□ 0.85
FOXRED1Q96CU9 PQLC3-204ENST00000441908 1784 ntTSL 2 BASIC20.37■□□□□ 0.85
FOXRED1Q96CU9 SDS-201ENST00000257549 1606 ntAPPRIS P1 TSL 2 BASIC20.37■□□□□ 0.85
FOXRED1Q96CU9 ZDHHC1-201ENST00000348579 2047 ntAPPRIS P2 TSL 1 (best) BASIC20.37■□□□□ 0.85
FOXRED1Q96CU9 ARHGAP29-202ENST00000370217 2043 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
FOXRED1Q96CU9 BTBD6-205ENST00000536364 1973 ntAPPRIS P2 TSL 5 BASIC20.37■□□□□ 0.85
FOXRED1Q96CU9 PVT1-212ENST00000521951 1535 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
FOXRED1Q96CU9 PPP2R2C-203ENST00000382599 1807 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
FOXRED1Q96CU9 FAM21EP-202ENST00000456967 2177 ntTSL 2 BASIC20.36■□□□□ 0.85
FOXRED1Q96CU9 AGAP3-201ENST00000335367 2675 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
FOXRED1Q96CU9 CACNA1H-210ENST00000638323 8048 ntAPPRIS ALT2 TSL 5 BASIC20.36■□□□□ 0.85
FOXRED1Q96CU9 U2AF1-201ENST00000291552 962 ntAPPRIS P3 TSL 1 (best) BASIC20.36■□□□□ 0.85
FOXRED1Q96CU9 TAF10-201ENST00000299424 1215 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
FOXRED1Q96CU9 IZUMO4-202ENST00000395301 1021 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
FOXRED1Q96CU9 MDFIC-206ENST00000448022 484 ntTSL 2 BASIC20.36■□□□□ 0.85
FOXRED1Q96CU9 U2AF1L5-202ENST00000619610 813 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
FOXRED1Q96CU9 DGCR6-208ENST00000608842 1837 ntTSL 2 BASIC20.36■□□□□ 0.85
FOXRED1Q96CU9 HSPBP1-201ENST00000255631 1768 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
FOXRED1Q96CU9 KAT8-202ENST00000448516 1789 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
FOXRED1Q96CU9 LRRC24-201ENST00000529415 1758 ntAPPRIS P2 TSL 1 (best) BASIC20.36■□□□□ 0.85
FOXRED1Q96CU9 AC012676.1-201ENST00000574705 1949 ntBASIC20.35■□□□□ 0.85
FOXRED1Q96CU9 CDYL-203ENST00000397588 2184 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
FOXRED1Q96CU9 GNB2-203ENST00000393926 1641 ntAPPRIS P1 TSL 5 BASIC20.35■□□□□ 0.85
FOXRED1Q96CU9 TXNRD2-201ENST00000334363 1893 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
FOXRED1Q96CU9 P3H3-201ENST00000290510 2632 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
FOXRED1Q96CU9 C7orf25-206ENST00000447342 1823 ntTSL 2 BASIC20.35■□□□□ 0.85
FOXRED1Q96CU9 HSD17B12-202ENST00000395700 994 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
FOXRED1Q96CU9 PFN2-211ENST00000489155 636 ntTSL 4 BASIC20.35■□□□□ 0.85
FOXRED1Q96CU9 AC016595.1-201ENST00000559410 383 ntTSL 3 BASIC20.35■□□□□ 0.85
FOXRED1Q96CU9 SLC35B2-204ENST00000537814 1715 ntTSL 2 BASIC20.35■□□□□ 0.85
FOXRED1Q96CU9 ZBTB45-205ENST00000600990 2159 ntAPPRIS P1 TSL 5 BASIC20.35■□□□□ 0.85
FOXRED1Q96CU9 C5orf58-204ENST00000521850 2113 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
FOXRED1Q96CU9 EXOSC6-201ENST00000435634 5153 ntAPPRIS P1 BASIC20.35■□□□□ 0.85
FOXRED1Q96CU9 AP000911.3-201ENST00000526377 1130 ntTSL 3 BASIC20.34■□□□□ 0.85
FOXRED1Q96CU9 SMOX-203ENST00000339123 2074 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
FOXRED1Q96CU9 ST3GAL5-269ENST00000640992 2292 ntAPPRIS ALT2 TSL 5 BASIC20.34■□□□□ 0.85
FOXRED1Q96CU9 GOLGA7-201ENST00000357743 2027 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
FOXRED1Q96CU9 ADSS-201ENST00000366535 2780 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
FOXRED1Q96CU9 TMED2-201ENST00000262225 2560 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
FOXRED1Q96CU9 NPEPL1-201ENST00000356091 2378 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
FOXRED1Q96CU9 LTBP3-212ENST00000529189 1997 ntTSL 2 BASIC20.34■□□□□ 0.85
FOXRED1Q96CU9 TRIM14-203ENST00000375098 1792 ntAPPRIS P1 TSL 2 BASIC20.34■□□□□ 0.85
FOXRED1Q96CU9 POTEF-201ENST00000361163 1586 ntTSL 5 BASIC20.34■□□□□ 0.85
FOXRED1Q96CU9 TANGO2-204ENST00000401833 1920 ntTSL 5 BASIC20.33■□□□□ 0.85
FOXRED1Q96CU9 CCDC96-201ENST00000310085 2091 ntAPPRIS P1 BASIC20.33■□□□□ 0.85
FOXRED1Q96CU9 LSR-201ENST00000347609 1880 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.85
FOXRED1Q96CU9 LSR-213ENST00000605618 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.85
FOXRED1Q96CU9 SRP68-213ENST00000629930 165 ntTSL 5 BASIC20.33■□□□□ 0.85
FOXRED1Q96CU9 GIT1-210ENST00000579937 2798 ntTSL 2 BASIC20.33■□□□□ 0.84
FOXRED1Q96CU9 GET4-201ENST00000265857 2090 ntAPPRIS P2 TSL 1 (best) BASIC20.33■□□□□ 0.84
FOXRED1Q96CU9 ROR1-202ENST00000371080 2305 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
FOXRED1Q96CU9 HMCES-204ENST00000502878 1952 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
FOXRED1Q96CU9 CDK2AP1-201ENST00000261692 1625 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
FOXRED1Q96CU9 BCL11B-203ENST00000443726 2599 ntAPPRIS ALT2 TSL 5 BASIC20.32■□□□□ 0.84
FOXRED1Q96CU9 CNTFR-201ENST00000351266 1910 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
FOXRED1Q96CU9 PTH1R-206ENST00000430002 1947 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
FOXRED1Q96CU9 TRAP1-202ENST00000538171 2052 ntTSL 2 BASIC20.32■□□□□ 0.84
FOXRED1Q96CU9 EIF5A-208ENST00000573542 1089 ntAPPRIS P1 TSL 2 BASIC20.32■□□□□ 0.84
FOXRED1Q96CU9 VEGFA-209ENST00000425836 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
FOXRED1Q96CU9 TTLL11-202ENST00000373776 2012 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
FOXRED1Q96CU9 AC091230.1-202ENST00000564823 5356 ntTSL 2 BASIC20.32■□□□□ 0.84
FOXRED1Q96CU9 ESR2-202ENST00000341099 2060 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
FOXRED1Q96CU9 RUNX2-211ENST00000625924 1458 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
FOXRED1Q96CU9 RPL27A-206ENST00000530022 878 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
FOXRED1Q96CU9 MIR3960-201ENST00000583311 91 ntBASIC20.31■□□□□ 0.84
FOXRED1Q96CU9 MIR6089-201ENST00000616698 64 ntBASIC20.31■□□□□ 0.84
FOXRED1Q96CU9 SOS2-201ENST00000216373 5498 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
FOXRED1Q96CU9 BRD3-202ENST00000371834 2529 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
FOXRED1Q96CU9 VPS53-211ENST00000571805 2356 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
FOXRED1Q96CU9 GPR137-202ENST00000377702 1478 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
FOXRED1Q96CU9 BCL7B-202ENST00000411832 1458 ntTSL 2 BASIC20.3■□□□□ 0.84
FOXRED1Q96CU9 BMP6-201ENST00000283147 2780 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
FOXRED1Q96CU9 TARSL2-207ENST00000615656 2356 ntAPPRIS ALT2 TSL 5 BASIC20.3■□□□□ 0.84
FOXRED1Q96CU9 TTC36-201ENST00000302783 874 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
FOXRED1Q96CU9 LINC01918-201ENST00000436841 797 ntTSL 2 BASIC20.3■□□□□ 0.84
FOXRED1Q96CU9 HOXD9-201ENST00000249499 1870 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 25.8 ms