Protein–RNA interactions for Protein: Q969M7

UBE2F, NEDD8-conjugating enzyme UBE2F, humanhuman

Predictions only

Length 185 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2FQ969M7 PDIA6-207ENST00000540494 2509 ntAPPRIS ALT1 TSL 2 BASIC21.49■■□□□ 1.03
UBE2FQ969M7 COPRS-202ENST00000378634 1041 ntTSL 2 BASIC21.49■■□□□ 1.03
UBE2FQ969M7 LRRC73-201ENST00000372441 2121 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
UBE2FQ969M7 INPP5J-206ENST00000404453 1613 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
UBE2FQ969M7 SLC35D2-202ENST00000375257 889 ntTSL 2 BASIC21.48■■□□□ 1.03
UBE2FQ969M7 HTATSF1-201ENST00000218364 2775 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
UBE2FQ969M7 LHX2-201ENST00000373615 2554 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
UBE2FQ969M7 PHACTR2-208ENST00000440869 2569 ntAPPRIS ALT2 TSL 2 BASIC21.48■■□□□ 1.03
UBE2FQ969M7 KCNMA1-283ENST00000640523 5425 ntAPPRIS ALT2 TSL 5 BASIC21.48■■□□□ 1.03
UBE2FQ969M7 ANO1-202ENST00000355303 4790 ntAPPRIS P2 TSL 1 (best) BASIC21.48■■□□□ 1.03
UBE2FQ969M7 PGR-AS1-202ENST00000632820 1545 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
UBE2FQ969M7 SAC3D1-201ENST00000398846 1566 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
UBE2FQ969M7 DNAJB11-201ENST00000265028 1688 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
UBE2FQ969M7 GNAL-201ENST00000269162 1722 ntAPPRIS P1 TSL 2 BASIC21.47■■□□□ 1.03
UBE2FQ969M7 DOHH-201ENST00000427575 2031 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
UBE2FQ969M7 CMPK2-203ENST00000458098 1224 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
UBE2FQ969M7 AC008813.1-201ENST00000536597 885 ntBASIC21.47■■□□□ 1.03
UBE2FQ969M7 CCDC71L-201ENST00000315965 1575 ntAPPRIS ALT2 TSL 5 BASIC21.47■■□□□ 1.03
UBE2FQ969M7 KIF2A-202ENST00000401507 2539 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
UBE2FQ969M7 CASP9-201ENST00000333868 2019 ntAPPRIS P2 TSL 1 (best) BASIC21.46■■□□□ 1.03
UBE2FQ969M7 PBX1-202ENST00000367897 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC21.46■■□□□ 1.03
UBE2FQ969M7 RRAS2-201ENST00000256196 1516 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
UBE2FQ969M7 HOXD9-201ENST00000249499 1870 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
UBE2FQ969M7 CHST11-203ENST00000547956 936 ntTSL 2 BASIC21.46■■□□□ 1.03
UBE2FQ969M7 MED25-210ENST00000612854 801 ntTSL 5 BASIC21.46■■□□□ 1.03
UBE2FQ969M7 MED25-213ENST00000620467 1293 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
UBE2FQ969M7 MED25-214ENST00000622402 642 ntTSL 5 BASIC21.46■■□□□ 1.03
UBE2FQ969M7 BSCL2-205ENST00000403550 1693 ntAPPRIS P3 TSL 5 BASIC21.46■■□□□ 1.03
UBE2FQ969M7 FBXL6-202ENST00000455319 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC21.46■■□□□ 1.03
UBE2FQ969M7 C1QL3-201ENST00000298943 2493 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
UBE2FQ969M7 USF3-203ENST00000491165 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC21.46■■□□□ 1.03
UBE2FQ969M7 POLE2-201ENST00000216367 1776 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
UBE2FQ969M7 TAZ-216ENST00000613002 1485 ntTSL 1 (best) BASIC21.45■■□□□ 1.03
UBE2FQ969M7 QKI-207ENST00000453779 5685 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
UBE2FQ969M7 AK8-201ENST00000298545 2072 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
UBE2FQ969M7 PEBP1-201ENST00000261313 1697 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
UBE2FQ969M7 PLEKHF2-202ENST00000519516 1144 ntAPPRIS P1 TSL 3 BASIC21.45■■□□□ 1.02
UBE2FQ969M7 MBP-237ENST00000579129 1052 ntTSL 5 BASIC21.45■■□□□ 1.02
UBE2FQ969M7 CDH23-206ENST00000398842 1759 ntTSL 5 BASIC21.45■■□□□ 1.02
UBE2FQ969M7 C1QTNF5-202ENST00000528368 1356 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
UBE2FQ969M7 EPB41L4A-AS2-201ENST00000623705 1396 ntBASIC21.45■■□□□ 1.02
UBE2FQ969M7 CAPN12-212ENST00000601953 2381 ntTSL 5 BASIC21.45■■□□□ 1.02
UBE2FQ969M7 HMCES-204ENST00000502878 1952 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
UBE2FQ969M7 SDS-201ENST00000257549 1606 ntAPPRIS P1 TSL 2 BASIC21.44■■□□□ 1.02
UBE2FQ969M7 UBE2S-201ENST00000264552 2548 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
UBE2FQ969M7 PDCD2-209ENST00000542896 1082 ntTSL 2 BASIC21.44■■□□□ 1.02
UBE2FQ969M7 DUX4L13-201ENST00000554103 1267 ntBASIC21.44■■□□□ 1.02
UBE2FQ969M7 DUX4L15-201ENST00000611059 1267 ntBASIC21.44■■□□□ 1.02
UBE2FQ969M7 DUX4L23-201ENST00000615195 1269 ntBASIC21.44■■□□□ 1.02
UBE2FQ969M7 DUX4L24-201ENST00000617576 1269 ntBASIC21.44■■□□□ 1.02
UBE2FQ969M7 DUX4L22-201ENST00000618238 1269 ntBASIC21.44■■□□□ 1.02
UBE2FQ969M7 DUX4L20-201ENST00000619712 1269 ntBASIC21.44■■□□□ 1.02
UBE2FQ969M7 DUX4L21-201ENST00000622058 1269 ntBASIC21.44■■□□□ 1.02
UBE2FQ969M7 DUX4L10-201ENST00000622460 1267 ntBASIC21.44■■□□□ 1.02
UBE2FQ969M7 DUX4L25-201ENST00000624915 1269 ntBASIC21.44■■□□□ 1.02
UBE2FQ969M7 PDE10A-205ENST00000616273 2118 ntTSL 2 BASIC21.44■■□□□ 1.02
UBE2FQ969M7 ATP8B2-201ENST00000368487 1523 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
UBE2FQ969M7 DLL3-201ENST00000205143 2332 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
UBE2FQ969M7 HAUS3-202ENST00000443786 2430 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
UBE2FQ969M7 TRIM14-203ENST00000375098 1792 ntAPPRIS P1 TSL 2 BASIC21.43■■□□□ 1.02
UBE2FQ969M7 C7orf25-206ENST00000447342 1823 ntTSL 2 BASIC21.43■■□□□ 1.02
UBE2FQ969M7 TMEM102-201ENST00000323206 1973 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
UBE2FQ969M7 ZBTB22-208ENST00000431845 2651 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
UBE2FQ969M7 WDR86-204ENST00000477459 1428 ntTSL 2 BASIC21.43■■□□□ 1.02
UBE2FQ969M7 ELOC-206ENST00000520242 1573 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
UBE2FQ969M7 PITX2-209ENST00000557119 1889 ntTSL 2 BASIC21.43■■□□□ 1.02
UBE2FQ969M7 DONSON-210ENST00000453626 2332 ntTSL 5 BASIC21.43■■□□□ 1.02
UBE2FQ969M7 KCNAB3-201ENST00000303790 2458 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
UBE2FQ969M7 EBPL-201ENST00000242827 914 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
UBE2FQ969M7 PROCA1-201ENST00000301039 1566 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
UBE2FQ969M7 SLC39A4-202ENST00000301305 2174 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
UBE2FQ969M7 AFDN-AS1-201ENST00000359760 2238 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
UBE2FQ969M7 TMUB1-202ENST00000392818 1563 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
UBE2FQ969M7 H2AFY-217ENST00000511689 2789 ntAPPRIS P4 TSL 1 (best) BASIC21.42■■□□□ 1.02
UBE2FQ969M7 NAPRT-204ENST00000449291 1965 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
UBE2FQ969M7 RRAD-202ENST00000420652 1476 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
UBE2FQ969M7 LINC01971-201ENST00000617888 1048 ntBASIC21.41■■□□□ 1.02
UBE2FQ969M7 HOMER2-201ENST00000304231 1990 ntAPPRIS P4 TSL 5 BASIC21.41■■□□□ 1.02
UBE2FQ969M7 PTH1R-206ENST00000430002 1947 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
UBE2FQ969M7 EPHB2-207ENST00000544305 1709 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
UBE2FQ969M7 RABEP2-203ENST00000544477 1645 ntTSL 2 BASIC21.4■■□□□ 1.02
UBE2FQ969M7 B3GALT6-201ENST00000379198 2777 ntAPPRIS P1 BASIC21.4■■□□□ 1.02
UBE2FQ969M7 ZSWIM6-201ENST00000252744 5501 ntAPPRIS P1 TSL 5 BASIC21.4■■□□□ 1.02
UBE2FQ969M7 PKM-201ENST00000319622 2717 ntAPPRIS P5 TSL 2 BASIC21.4■■□□□ 1.02
UBE2FQ969M7 TANGO2-204ENST00000401833 1920 ntTSL 5 BASIC21.4■■□□□ 1.02
UBE2FQ969M7 HGH1-207ENST00000628266 258 ntTSL 5 BASIC21.4■■□□□ 1.02
UBE2FQ969M7 PLEKHO1-202ENST00000369126 1809 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
UBE2FQ969M7 KAT5-208ENST00000530446 1697 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
UBE2FQ969M7 ZNF707-222ENST00000532158 2218 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
UBE2FQ969M7 NCK2-201ENST00000233154 2683 ntAPPRIS P1 TSL 5 BASIC21.4■■□□□ 1.02
UBE2FQ969M7 GAL3ST3-203ENST00000527878 1599 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
UBE2FQ969M7 HMGA2-201ENST00000354636 1529 ntTSL 1 (best) BASIC21.39■■□□□ 1.02
UBE2FQ969M7 FNDC11-204ENST00000615526 2954 ntAPPRIS P1 BASIC21.39■■□□□ 1.02
UBE2FQ969M7 PTGES2-202ENST00000338961 2331 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
UBE2FQ969M7 DTNB-210ENST00000407186 2275 ntTSL 5 BASIC21.39■■□□□ 1.02
UBE2FQ969M7 STOML1-201ENST00000316900 2169 ntTSL 2 BASIC21.39■■□□□ 1.01
UBE2FQ969M7 MEIS3-204ENST00000558555 1715 ntAPPRIS ALT2 TSL 5 BASIC21.39■■□□□ 1.01
UBE2FQ969M7 SURF1-201ENST00000371974 1093 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
UBE2FQ969M7 SURF1-205ENST00000615505 991 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
UBE2FQ969M7 LINGO3-201ENST00000585527 2241 ntAPPRIS P1 BASIC21.39■■□□□ 1.01
Retrieved 100 of 98,524 protein–RNA pairs in 55.2 ms