Protein–RNA interactions for Protein: Q93050

ATP6V0A1, V-type proton ATPase 116 kDa subunit a isoform 1, humanhuman

Predictions only

Length 837 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP6V0A1Q93050 HMX3-201ENST00000357878 1173 ntAPPRIS P1 TSL 2 BASIC26.57■■□□□ 1.84
ATP6V0A1Q93050 CCER2-201ENST00000571838 1057 ntAPPRIS P2 TSL 5 BASIC26.57■■□□□ 1.84
ATP6V0A1Q93050 MMP25-AS1-209ENST00000576250 779 ntTSL 5 BASIC26.57■■□□□ 1.84
ATP6V0A1Q93050 AC018413.1-201ENST00000581996 1200 ntTSL 2 BASIC26.57■■□□□ 1.84
ATP6V0A1Q93050 TCEA1-214ENST00000640382 1234 ntTSL 5 BASIC26.57■■□□□ 1.84
ATP6V0A1Q93050 CTF1-201ENST00000279804 1664 ntAPPRIS P3 TSL 1 (best) BASIC26.57■■□□□ 1.84
ATP6V0A1Q93050 LYL1-201ENST00000264824 1490 ntAPPRIS P1 TSL 1 (best) BASIC26.56■■□□□ 1.84
ATP6V0A1Q93050 ZDHHC16-206ENST00000370854 1798 ntAPPRIS P4 TSL 1 (best) BASIC26.56■■□□□ 1.84
ATP6V0A1Q93050 FBXO7-206ENST00000452138 1535 ntTSL 2 BASIC26.56■■□□□ 1.84
ATP6V0A1Q93050 BTBD6-203ENST00000392554 2176 ntAPPRIS P2 TSL 1 (best) BASIC26.56■■□□□ 1.84
ATP6V0A1Q93050 AC097639.1-201ENST00000565519 1891 ntBASIC26.56■■□□□ 1.84
ATP6V0A1Q93050 CHST13-201ENST00000319340 1789 ntAPPRIS P1 TSL 1 (best) BASIC26.56■■□□□ 1.84
ATP6V0A1Q93050 RUNDC3A-201ENST00000225441 1821 ntTSL 1 (best) BASIC26.55■■□□□ 1.84
ATP6V0A1Q93050 BRI3-201ENST00000297290 780 ntAPPRIS P1 TSL 1 (best) BASIC26.55■■□□□ 1.84
ATP6V0A1Q93050 GRAMD4P7-201ENST00000578182 1232 ntBASIC26.55■■□□□ 1.84
ATP6V0A1Q93050 CCDC194-202ENST00000636079 705 ntAPPRIS P1 TSL 5 BASIC26.55■■□□□ 1.84
ATP6V0A1Q93050 FAM107A-203ENST00000447756 1432 ntTSL 1 (best) BASIC26.55■■□□□ 1.84
ATP6V0A1Q93050 GYG2-205ENST00000398806 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC26.55■■□□□ 1.84
ATP6V0A1Q93050 PLPPR3-201ENST00000359894 2387 ntAPPRIS P3 TSL 1 (best) BASIC26.54■■□□□ 1.84
ATP6V0A1Q93050 MRPS34-202ENST00000397375 1024 ntAPPRIS P1 TSL 1 (best) BASIC26.54■■□□□ 1.84
ATP6V0A1Q93050 RPL31-208ENST00000409733 825 ntAPPRIS P3 TSL 1 (best) BASIC26.54■■□□□ 1.84
ATP6V0A1Q93050 TRAPPC5-202ENST00000426877 765 ntAPPRIS P1 TSL 2 BASIC26.54■■□□□ 1.84
ATP6V0A1Q93050 AC120024.1-201ENST00000562672 995 ntBASIC26.54■■□□□ 1.84
ATP6V0A1Q93050 FAM173A-207ENST00000569529 1052 ntAPPRIS P3 TSL 1 (best) BASIC26.54■■□□□ 1.84
ATP6V0A1Q93050 ERO1A-211ENST00000629528 998 ntTSL 5 BASIC26.54■■□□□ 1.84
ATP6V0A1Q93050 SLC25A1-202ENST00000451283 1514 ntTSL 2 BASIC26.54■■□□□ 1.84
ATP6V0A1Q93050 TNFSF12-TNFSF13-201ENST00000293826 1816 ntAPPRIS P1 TSL 1 (best) BASIC26.53■■□□□ 1.84
ATP6V0A1Q93050 RCCD1-203ENST00000555155 1871 ntAPPRIS ALT1 TSL 5 BASIC26.53■■□□□ 1.84
ATP6V0A1Q93050 C11orf80-204ENST00000525908 2135 ntAPPRIS P3 TSL 2 BASIC26.53■■□□□ 1.84
ATP6V0A1Q93050 KLC1-225ENST00000557575 2188 ntTSL 5 BASIC26.53■■□□□ 1.84
ATP6V0A1Q93050 MAGI2-AS3-201ENST00000414797 1072 ntTSL 2 BASIC26.53■■□□□ 1.84
ATP6V0A1Q93050 PYCR1-203ENST00000402252 1346 ntTSL 2 BASIC26.53■■□□□ 1.84
ATP6V0A1Q93050 HOMER3-201ENST00000221222 1384 ntAPPRIS ALT1 TSL 5 BASIC26.53■■□□□ 1.84
ATP6V0A1Q93050 CLEC2L-201ENST00000422142 1359 ntAPPRIS P2 TSL 3 BASIC26.53■■□□□ 1.84
ATP6V0A1Q93050 C16orf87-201ENST00000285697 1585 ntAPPRIS P1 TSL 1 (best) BASIC26.53■■□□□ 1.84
ATP6V0A1Q93050 DUSP8P4-201ENST00000399538 1761 ntBASIC26.53■■□□□ 1.84
ATP6V0A1Q93050 LYPLA1-215ENST00000618914 2482 ntTSL 5 BASIC26.53■■□□□ 1.84
ATP6V0A1Q93050 TST-201ENST00000249042 1211 ntAPPRIS P1 TSL 1 (best) BASIC26.52■■□□□ 1.84
ATP6V0A1Q93050 EPCAM-201ENST00000263735 1724 ntAPPRIS P1 TSL 1 (best) BASIC26.52■■□□□ 1.84
ATP6V0A1Q93050 RAB20-201ENST00000267328 1518 ntAPPRIS P1 TSL 1 (best) BASIC26.52■■□□□ 1.84
ATP6V0A1Q93050 FAM162B-201ENST00000368557 1036 ntAPPRIS P1 TSL 1 (best) BASIC26.52■■□□□ 1.84
ATP6V0A1Q93050 NFU1-203ENST00000410022 1467 ntAPPRIS P3 TSL 1 (best) BASIC26.52■■□□□ 1.84
ATP6V0A1Q93050 MOSPD3-204ENST00000424091 1115 ntTSL 1 (best) BASIC26.52■■□□□ 1.84
ATP6V0A1Q93050 AC026785.2-201ENST00000511821 867 ntTSL 2 BASIC26.52■■□□□ 1.84
ATP6V0A1Q93050 RNF166-201ENST00000312838 1883 ntAPPRIS P1 TSL 1 (best) BASIC26.51■■□□□ 1.83
ATP6V0A1Q93050 AC091060.1-201ENST00000623524 1766 ntBASIC26.51■■□□□ 1.83
ATP6V0A1Q93050 TMUB1-201ENST00000297533 1353 ntAPPRIS P1 TSL 1 (best) BASIC26.51■■□□□ 1.83
ATP6V0A1Q93050 CFAP77-202ENST00000393215 901 ntAPPRIS ALT2 TSL 5 BASIC26.51■■□□□ 1.83
ATP6V0A1Q93050 DTWD2-204ENST00000515439 1275 ntTSL 5 BASIC26.51■■□□□ 1.83
ATP6V0A1Q93050 ARTN-203ENST00000414809 1943 ntAPPRIS P4 TSL 3 BASIC26.51■■□□□ 1.83
ATP6V0A1Q93050 MSANTD2-201ENST00000239614 2495 ntTSL 2 BASIC26.5■■□□□ 1.83
ATP6V0A1Q93050 PEA15-201ENST00000360472 2471 ntAPPRIS P1 TSL 1 (best) BASIC26.5■■□□□ 1.83
ATP6V0A1Q93050 GNB2-203ENST00000393926 1641 ntAPPRIS P1 TSL 5 BASIC26.5■■□□□ 1.83
ATP6V0A1Q93050 BCKDHB-202ENST00000356489 1514 ntAPPRIS P1 TSL 1 (best) BASIC26.5■■□□□ 1.83
ATP6V0A1Q93050 PRELID1-201ENST00000303204 1261 ntAPPRIS P1 TSL 1 (best) BASIC26.5■■□□□ 1.83
ATP6V0A1Q93050 CFD-202ENST00000592860 809 ntAPPRIS ALT2 TSL 1 (best) BASIC26.5■■□□□ 1.83
ATP6V0A1Q93050 SNHG7-204ENST00000447221 2157 ntTSL 2 BASIC26.5■■□□□ 1.83
ATP6V0A1Q93050 HTRA2-202ENST00000352222 1450 ntTSL 1 (best) BASIC26.49■■□□□ 1.83
ATP6V0A1Q93050 PDPK1-204ENST00000441549 1729 ntTSL 1 (best) BASIC26.49■■□□□ 1.83
ATP6V0A1Q93050 FBXL6-202ENST00000455319 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC26.49■■□□□ 1.83
ATP6V0A1Q93050 VSTM2L-201ENST00000373459 831 ntTSL 3 BASIC26.49■■□□□ 1.83
ATP6V0A1Q93050 CDKN2B-202ENST00000380142 859 ntTSL 1 (best) BASIC26.49■■□□□ 1.83
ATP6V0A1Q93050 FAM72B-203ENST00000452190 748 ntTSL 3 BASIC26.49■■□□□ 1.83
ATP6V0A1Q93050 AC137630.3-201ENST00000607245 391 ntBASIC26.49■■□□□ 1.83
ATP6V0A1Q93050 AC145676.1-201ENST00000514988 2004 ntBASIC26.49■■□□□ 1.83
ATP6V0A1Q93050 SLC35A2-209ENST00000452555 1563 ntTSL 2 BASIC26.49■■□□□ 1.83
ATP6V0A1Q93050 CEND1-201ENST00000330106 1649 ntAPPRIS P1 TSL 1 (best) BASIC26.48■■□□□ 1.83
ATP6V0A1Q93050 CACNG6-203ENST00000352529 1635 ntTSL 5 BASIC26.48■■□□□ 1.83
ATP6V0A1Q93050 CHTF8-205ENST00000519520 856 ntTSL 2 BASIC26.48■■□□□ 1.83
ATP6V0A1Q93050 AP002893.1-201ENST00000528885 684 ntTSL 2 BASIC26.48■■□□□ 1.83
ATP6V0A1Q93050 PLEKHJ1-213ENST00000591099 1092 ntTSL 2 BASIC26.48■■□□□ 1.83
ATP6V0A1Q93050 MIR663AHG-227ENST00000608084 765 ntTSL 5 BASIC26.48■■□□□ 1.83
ATP6V0A1Q93050 MAD2L2-201ENST00000235310 1860 ntAPPRIS P1 TSL 2 BASIC26.47■■□□□ 1.83
ATP6V0A1Q93050 CLIC3-203ENST00000494426 1017 ntAPPRIS P1 TSL 1 (best) BASIC26.47■■□□□ 1.83
ATP6V0A1Q93050 UNC93B8-201ENST00000511903 705 ntBASIC26.47■■□□□ 1.83
ATP6V0A1Q93050 MAGI2-211ENST00000535697 6146 ntTSL 5 BASIC26.47■■□□□ 1.83
ATP6V0A1Q93050 FOXO3B-201ENST00000395675 1928 ntBASIC26.47■■□□□ 1.83
ATP6V0A1Q93050 RBM33-201ENST00000287912 1404 ntTSL 2 BASIC26.47■■□□□ 1.83
ATP6V0A1Q93050 SHISA5-201ENST00000296444 2369 ntTSL 1 (best) BASIC26.46■■□□□ 1.83
ATP6V0A1Q93050 PPM1B-202ENST00000345249 1713 ntTSL 1 (best) BASIC26.46■■□□□ 1.83
ATP6V0A1Q93050 RINL-202ENST00000591812 1910 ntAPPRIS ALT2 TSL 2 BASIC26.46■■□□□ 1.83
ATP6V0A1Q93050 GBX1-201ENST00000297537 1092 ntAPPRIS P1 TSL 1 (best) BASIC26.46■■□□□ 1.83
ATP6V0A1Q93050 SYCE1-204ENST00000432597 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC26.46■■□□□ 1.83
ATP6V0A1Q93050 AC073934.1-201ENST00000490314 495 ntTSL 4 BASIC26.46■■□□□ 1.83
ATP6V0A1Q93050 TSPAN4-203ENST00000397397 1423 ntAPPRIS P1 TSL 1 (best) BASIC26.46■■□□□ 1.83
ATP6V0A1Q93050 ACSS1-202ENST00000376726 2244 ntTSL 2 BASIC26.46■■□□□ 1.83
ATP6V0A1Q93050 CCR10-201ENST00000332438 1773 ntAPPRIS P1 TSL 1 (best) BASIC26.46■■□□□ 1.83
ATP6V0A1Q93050 ANKS3-204ENST00000585773 1946 ntTSL 2 BASIC26.45■■□□□ 1.83
ATP6V0A1Q93050 DLG3-203ENST00000374360 5905 ntAPPRIS P2 TSL 1 (best) BASIC26.45■■□□□ 1.83
ATP6V0A1Q93050 CUL4A-209ENST00000488558 1111 ntTSL 3 BASIC26.45■■□□□ 1.82
ATP6V0A1Q93050 TMEM165-204ENST00000506198 828 ntTSL 2 BASIC26.45■■□□□ 1.82
ATP6V0A1Q93050 KRT72-202ENST00000354310 1764 ntTSL 2 BASIC26.45■■□□□ 1.82
ATP6V0A1Q93050 PLEKHO1-202ENST00000369126 1809 ntTSL 1 (best) BASIC26.44■■□□□ 1.82
ATP6V0A1Q93050 SLC16A11-202ENST00000447225 1779 ntAPPRIS ALT2 TSL 5 BASIC26.44■■□□□ 1.82
ATP6V0A1Q93050 OXSR1-203ENST00000446845 1908 ntTSL 5 BASIC26.44■■□□□ 1.82
ATP6V0A1Q93050 AC103702.2-201ENST00000433510 1270 ntTSL 2 BASIC26.44■■□□□ 1.82
ATP6V0A1Q93050 CACNG7-203ENST00000391767 2688 ntAPPRIS P1 TSL 5 BASIC26.44■■□□□ 1.82
ATP6V0A1Q93050 NEUROG3-201ENST00000242462 1376 ntAPPRIS P1 TSL 1 (best) BASIC26.44■■□□□ 1.82
ATP6V0A1Q93050 AC021242.3-201ENST00000607598 1377 ntBASIC26.44■■□□□ 1.82
ATP6V0A1Q93050 TMIE-201ENST00000326431 1824 ntAPPRIS P1 TSL 1 (best) BASIC26.44■■□□□ 1.82
Retrieved 100 of 98,524 protein–RNA pairs in 19.9 ms