Protein–RNA interactions for Protein: Q92738

USP6NL, USP6 N-terminal-like protein, humanhuman

Predictions only

Length 828 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP6NLQ92738 AP004609.3-201ENST00000610705 1884 ntBASIC27.06■■□□□ 1.92
USP6NLQ92738 AF131216.4-201ENST00000638924 1588 ntBASIC27.06■■□□□ 1.92
USP6NLQ92738 CTU1-201ENST00000421832 2087 ntAPPRIS P1 TSL 2 BASIC27.06■■□□□ 1.92
USP6NLQ92738 PDPK1-203ENST00000389224 2416 ntTSL 2 BASIC27.06■■□□□ 1.92
USP6NLQ92738 TMEM203-201ENST00000343666 1557 ntAPPRIS P1 BASIC27.05■■□□□ 1.92
USP6NLQ92738 CLTA-204ENST00000433436 1235 ntAPPRIS ALT1 TSL 1 (best) BASIC27.05■■□□□ 1.92
USP6NLQ92738 CLTA-209ENST00000538225 1181 ntTSL 2 BASIC27.05■■□□□ 1.92
USP6NLQ92738 CLTA-210ENST00000540080 989 ntTSL 2 BASIC27.05■■□□□ 1.92
USP6NLQ92738 ZNF584-205ENST00000596281 575 ntTSL 2 BASIC27.05■■□□□ 1.92
USP6NLQ92738 EEF1D-203ENST00000419152 1452 ntAPPRIS ALT2 TSL 5 BASIC27.05■■□□□ 1.92
USP6NLQ92738 HDHD5-202ENST00000336737 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC27.04■■□□□ 1.92
USP6NLQ92738 TRIM7-202ENST00000334421 1228 ntTSL 1 (best) BASIC27.04■■□□□ 1.92
USP6NLQ92738 MCRIP1-202ENST00000457257 942 ntTSL 3 BASIC27.04■■□□□ 1.92
USP6NLQ92738 ST6GALNAC6-203ENST00000373142 2448 ntTSL 1 (best) BASIC27.04■■□□□ 1.92
USP6NLQ92738 ZNF74-204ENST00000405993 1839 ntAPPRIS ALT2 TSL 5 BASIC27.03■■□□□ 1.92
USP6NLQ92738 ANKRD65-205ENST00000537107 2190 ntAPPRIS P1 TSL 5 BASIC27.02■■□□□ 1.92
USP6NLQ92738 SHOX2-201ENST00000389589 2072 ntAPPRIS P3 TSL 1 (best) BASIC27.02■■□□□ 1.92
USP6NLQ92738 SNAI3-AS1-204ENST00000567997 2048 ntBASIC27.02■■□□□ 1.92
USP6NLQ92738 MOB4-204ENST00000409360 1447 ntTSL 5 BASIC27.01■■□□□ 1.91
USP6NLQ92738 MXRA7-202ENST00000375036 1950 ntAPPRIS ALT2 TSL 2 BASIC27.01■■□□□ 1.91
USP6NLQ92738 WSB2-201ENST00000315436 2646 ntAPPRIS P1 TSL 1 (best) BASIC27.01■■□□□ 1.91
USP6NLQ92738 CBR3-201ENST00000290354 1169 ntAPPRIS P1 TSL 1 (best) BASIC27.01■■□□□ 1.91
USP6NLQ92738 DCTPP1-201ENST00000319285 1222 ntAPPRIS P1 TSL 1 (best) BASIC27.01■■□□□ 1.91
USP6NLQ92738 YTHDF1-201ENST00000370334 747 ntTSL 3 BASIC27■■□□□ 1.91
USP6NLQ92738 AK3-203ENST00000447596 705 ntTSL 2 BASIC27■■□□□ 1.91
USP6NLQ92738 SSSCA1-AS1-201ENST00000567594 614 ntBASIC27■■□□□ 1.91
USP6NLQ92738 TMEM80-207ENST00000608174 800 ntTSL 5 BASIC27■■□□□ 1.91
USP6NLQ92738 HIST1H2AL-201ENST00000613174 393 ntAPPRIS P1 BASIC27■■□□□ 1.91
USP6NLQ92738 DHRS11-215ENST00000618403 1598 ntAPPRIS P1 TSL 1 (best) BASIC27■■□□□ 1.91
USP6NLQ92738 LINC01970-201ENST00000581489 1810 ntTSL 1 (best) BASIC27■■□□□ 1.91
USP6NLQ92738 NKX2-8-201ENST00000258829 1261 ntAPPRIS P1 TSL 1 (best) BASIC26.99■■□□□ 1.91
USP6NLQ92738 CD72-202ENST00000378430 585 ntTSL 3 BASIC26.99■■□□□ 1.91
USP6NLQ92738 BSCL2-205ENST00000403550 1693 ntAPPRIS P3 TSL 5 BASIC26.98■■□□□ 1.91
USP6NLQ92738 SHF-206ENST00000560471 2499 ntTSL 5 BASIC26.98■■□□□ 1.91
USP6NLQ92738 EVA1C-203ENST00000401402 1558 ntTSL 5 BASIC26.98■■□□□ 1.91
USP6NLQ92738 AMH-201ENST00000221496 1821 ntAPPRIS P1 TSL 1 (best) BASIC26.98■■□□□ 1.91
USP6NLQ92738 LIN7B-202ENST00000391864 582 ntTSL 3 BASIC26.98■■□□□ 1.91
USP6NLQ92738 LINC01632-201ENST00000615763 496 ntTSL 3 BASIC26.98■■□□□ 1.91
USP6NLQ92738 PPP1R3F-205ENST00000495799 1537 ntTSL 1 (best) BASIC26.98■■□□□ 1.91
USP6NLQ92738 LACTB-201ENST00000261893 1972 ntAPPRIS P1 TSL 1 (best) BASIC26.97■■□□□ 1.91
USP6NLQ92738 SSR2-210ENST00000480567 895 ntAPPRIS P1 TSL 2 BASIC26.97■■□□□ 1.91
USP6NLQ92738 PDSS1-201ENST00000376215 1626 ntAPPRIS P1 TSL 1 (best) BASIC26.97■■□□□ 1.91
USP6NLQ92738 U2AF1-204ENST00000459639 1675 ntTSL 1 (best) BASIC26.96■■□□□ 1.91
USP6NLQ92738 U2AF1L5-204ENST00000623375 1675 ntTSL 1 (best) BASIC26.96■■□□□ 1.91
USP6NLQ92738 EBPL-204ENST00000378272 766 ntTSL 3 BASIC26.96■■□□□ 1.91
USP6NLQ92738 MIR17HG-201ENST00000400282 931 ntTSL 1 (best) BASIC26.96■■□□□ 1.91
USP6NLQ92738 TSPAN4-203ENST00000397397 1423 ntAPPRIS P1 TSL 1 (best) BASIC26.96■■□□□ 1.91
USP6NLQ92738 NRM-201ENST00000259953 1755 ntAPPRIS P2 TSL 2 BASIC26.96■■□□□ 1.91
USP6NLQ92738 HNRNPD-203ENST00000353341 1585 ntAPPRIS ALT1 TSL 1 (best) BASIC26.96■■□□□ 1.91
USP6NLQ92738 TMEM121-202ENST00000431372 1519 ntAPPRIS P1 TSL 5 BASIC26.95■■□□□ 1.91
USP6NLQ92738 AC119427.1-201ENST00000633182 556 ntTSL 4 BASIC26.95■■□□□ 1.9
USP6NLQ92738 SLC16A3-214ENST00000582743 2002 ntAPPRIS P1 TSL 1 (best) BASIC26.95■■□□□ 1.9
USP6NLQ92738 SLC52A2-208ENST00000527078 1790 ntAPPRIS P1 TSL 5 BASIC26.94■■□□□ 1.9
USP6NLQ92738 FGF22-201ENST00000215530 1311 ntAPPRIS P1 TSL 1 (best) BASIC26.94■■□□□ 1.9
USP6NLQ92738 TTC3-225ENST00000540756 2025 ntTSL 2 BASIC26.94■■□□□ 1.9
USP6NLQ92738 AC092343.1-201ENST00000500224 729 ntTSL 3 BASIC26.94■■□□□ 1.9
USP6NLQ92738 MYL5-208ENST00000511290 781 ntTSL 1 (best) BASIC26.94■■□□□ 1.9
USP6NLQ92738 EPHA10-211ENST00000540011 720 ntTSL 5 BASIC26.94■■□□□ 1.9
USP6NLQ92738 ZNRF1-205ENST00000566250 1069 ntTSL 1 (best) BASIC26.94■■□□□ 1.9
USP6NLQ92738 ZNRF1-206ENST00000567962 1234 ntAPPRIS P1 TSL 1 (best) BASIC26.94■■□□□ 1.9
USP6NLQ92738 AC106739.1-201ENST00000617035 715 ntBASIC26.94■■□□□ 1.9
USP6NLQ92738 CA9-204ENST00000617161 1374 ntTSL 1 (best) BASIC26.94■■□□□ 1.9
USP6NLQ92738 SLC35A2-209ENST00000452555 1563 ntTSL 2 BASIC26.93■■□□□ 1.9
USP6NLQ92738 ZNRF2P3-201ENST00000424200 374 ntBASIC26.93■■□□□ 1.9
USP6NLQ92738 R3HCC1-201ENST00000265806 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC26.93■■□□□ 1.9
USP6NLQ92738 SUMF1-202ENST00000383843 1447 ntTSL 2 BASIC26.92■■□□□ 1.9
USP6NLQ92738 SPAG16-201ENST00000272898 1059 ntTSL 5 BASIC26.92■■□□□ 1.9
USP6NLQ92738 FOXB2-201ENST00000376708 1299 ntAPPRIS P1 BASIC26.92■■□□□ 1.9
USP6NLQ92738 TFPT-201ENST00000391757 774 ntTSL 5 BASIC26.92■■□□□ 1.9
USP6NLQ92738 TFPT-202ENST00000391758 804 ntAPPRIS ALT2 TSL 1 (best) BASIC26.92■■□□□ 1.9
USP6NLQ92738 CLTA-206ENST00000466396 695 ntTSL 2 BASIC26.92■■□□□ 1.9
USP6NLQ92738 APLP1-201ENST00000221891 2495 ntAPPRIS P1 TSL 1 (best) BASIC26.91■■□□□ 1.9
USP6NLQ92738 PHF11-202ENST00000378319 1359 ntAPPRIS P3 TSL 1 (best) BASIC26.91■■□□□ 1.9
USP6NLQ92738 PTOV1-220ENST00000601675 1587 ntAPPRIS P1 TSL 1 (best) BASIC26.91■■□□□ 1.9
USP6NLQ92738 PAOX-203ENST00000357296 1633 ntTSL 1 (best) BASIC26.9■■□□□ 1.9
USP6NLQ92738 FZD2-201ENST00000315323 2112 ntAPPRIS P1 BASIC26.9■■□□□ 1.9
USP6NLQ92738 TMUB1-202ENST00000392818 1563 ntAPPRIS P1 TSL 1 (best) BASIC26.9■■□□□ 1.9
USP6NLQ92738 DNPH1-201ENST00000230431 657 ntAPPRIS P1 TSL 1 (best) BASIC26.9■■□□□ 1.9
USP6NLQ92738 GUK1-205ENST00000366722 850 ntTSL 3 BASIC26.9■■□□□ 1.9
USP6NLQ92738 HOXA11-AS1_1.1-201ENST00000613939 98 ntBASIC26.9■■□□□ 1.9
USP6NLQ92738 SERPING1-205ENST00000403558 2231 ntTSL 5 BASIC26.9■■□□□ 1.9
USP6NLQ92738 PLEKHO1-202ENST00000369126 1809 ntTSL 1 (best) BASIC26.89■■□□□ 1.9
USP6NLQ92738 CASP9-202ENST00000348549 1621 ntTSL 1 (best) BASIC26.89■■□□□ 1.9
USP6NLQ92738 ZNF784-202ENST00000591479 1559 ntTSL 1 (best) BASIC26.88■■□□□ 1.89
USP6NLQ92738 LYL1-201ENST00000264824 1490 ntAPPRIS P1 TSL 1 (best) BASIC26.88■■□□□ 1.89
USP6NLQ92738 AL031432.3-201ENST00000607698 485 ntBASIC26.88■■□□□ 1.89
USP6NLQ92738 GPX4-213ENST00000622390 1002 ntTSL 5 BASIC26.88■■□□□ 1.89
USP6NLQ92738 FHL2-203ENST00000358129 1578 ntTSL 5 BASIC26.88■■□□□ 1.89
USP6NLQ92738 HES5-201ENST00000378453 1306 ntAPPRIS P1 TSL 1 (best) BASIC26.88■■□□□ 1.89
USP6NLQ92738 GPR160-201ENST00000355897 2039 ntAPPRIS P1 TSL 1 (best) BASIC26.87■■□□□ 1.89
USP6NLQ92738 PLSCR3-209ENST00000574401 2032 ntAPPRIS P1 TSL 1 (best) BASIC26.87■■□□□ 1.89
USP6NLQ92738 PBX2P1-201ENST00000493219 1291 ntBASIC26.87■■□□□ 1.89
USP6NLQ92738 AP006621.1-201ENST00000532946 536 ntTSL 5 BASIC26.87■■□□□ 1.89
USP6NLQ92738 AC009097.2-201ENST00000562763 465 ntTSL 2 BASIC26.87■■□□□ 1.89
USP6NLQ92738 SNX5-217ENST00000606557 1087 ntBASIC26.87■■□□□ 1.89
USP6NLQ92738 ACTR3B-201ENST00000256001 2216 ntAPPRIS P1 TSL 1 (best) BASIC26.87■■□□□ 1.89
USP6NLQ92738 ITGA9-203ENST00000422441 2282 ntTSL 1 (best) BASIC26.87■■□□□ 1.89
USP6NLQ92738 TMEM9-201ENST00000367330 1959 ntAPPRIS P3 TSL 1 (best) BASIC26.86■■□□□ 1.89
USP6NLQ92738 MRPL41-201ENST00000371443 1262 ntAPPRIS P1 TSL 1 (best) BASIC26.86■■□□□ 1.89
USP6NLQ92738 PABPN1-207ENST00000556821 1220 ntTSL 2 BASIC26.86■■□□□ 1.89
Retrieved 100 of 98,524 protein–RNA pairs in 15.7 ms