Protein–RNA interactions for Protein: Q8WWA1

TMEM40, Transmembrane protein 40, humanhuman

Predictions only

Length 233 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM40Q8WWA1 AC009531.1-201ENST00000442323 580 ntTSL 4 BASIC25.98■■□□□ 1.75
TMEM40Q8WWA1 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC25.98■■□□□ 1.75
TMEM40Q8WWA1 GAK-223ENST00000628912 497 ntTSL 5 BASIC25.98■■□□□ 1.75
TMEM40Q8WWA1 MTMR1-202ENST00000370390 2755 ntAPPRIS P1 TSL 1 (best) BASIC25.98■■□□□ 1.75
TMEM40Q8WWA1 HNRNPD-203ENST00000353341 1585 ntAPPRIS ALT1 TSL 1 (best) BASIC25.98■■□□□ 1.75
TMEM40Q8WWA1 PHF23-212ENST00000576955 1944 ntTSL 2 BASIC25.98■■□□□ 1.75
TMEM40Q8WWA1 GSK3A-201ENST00000222330 2188 ntAPPRIS P2 TSL 1 (best) BASIC25.97■■□□□ 1.75
TMEM40Q8WWA1 TSPAN4-203ENST00000397397 1423 ntAPPRIS P1 TSL 1 (best) BASIC25.97■■□□□ 1.75
TMEM40Q8WWA1 HTRA1-201ENST00000368984 2120 ntAPPRIS P1 TSL 1 (best) BASIC25.97■■□□□ 1.75
TMEM40Q8WWA1 SHISA5-201ENST00000296444 2369 ntTSL 1 (best) BASIC25.97■■□□□ 1.75
TMEM40Q8WWA1 AC092028.1-203ENST00000608262 953 ntBASIC25.97■■□□□ 1.75
TMEM40Q8WWA1 AC011551.1-201ENST00000614101 683 ntBASIC25.97■■□□□ 1.75
TMEM40Q8WWA1 RMI2-201ENST00000312499 1457 ntAPPRIS P1 TSL 1 (best) BASIC25.97■■□□□ 1.75
TMEM40Q8WWA1 TWF2-201ENST00000305533 1718 ntAPPRIS P1 TSL 1 (best) BASIC25.97■■□□□ 1.75
TMEM40Q8WWA1 C16orf95-201ENST00000253461 953 ntAPPRIS P3 TSL 1 (best) BASIC25.96■■□□□ 1.75
TMEM40Q8WWA1 FEZ1-202ENST00000366139 1053 ntTSL 2 BASIC25.96■■□□□ 1.75
TMEM40Q8WWA1 GUCD1-202ENST00000402766 865 ntTSL 2 BASIC25.96■■□□□ 1.75
TMEM40Q8WWA1 AC073111.5-204ENST00000498682 1167 ntAPPRIS P1 TSL 2 BASIC25.96■■□□□ 1.75
TMEM40Q8WWA1 ZNF428-201ENST00000300811 1412 ntAPPRIS P1 TSL 1 (best) BASIC25.96■■□□□ 1.75
TMEM40Q8WWA1 LINC01970-201ENST00000581489 1810 ntTSL 1 (best) BASIC25.95■■□□□ 1.75
TMEM40Q8WWA1 FOXO3B-201ENST00000395675 1928 ntBASIC25.95■■□□□ 1.74
TMEM40Q8WWA1 PEMT-201ENST00000255389 1013 ntTSL 1 (best) BASIC25.95■■□□□ 1.74
TMEM40Q8WWA1 ZNF419-210ENST00000520540 568 ntTSL 4 BASIC25.95■■□□□ 1.74
TMEM40Q8WWA1 KLHL26-202ENST00000595182 522 ntTSL 4 BASIC25.95■■□□□ 1.74
TMEM40Q8WWA1 C16orf87-201ENST00000285697 1585 ntAPPRIS P1 TSL 1 (best) BASIC25.95■■□□□ 1.74
TMEM40Q8WWA1 DNAJC4-202ENST00000321685 1288 ntAPPRIS P3 TSL 1 (best) BASIC25.93■■□□□ 1.74
TMEM40Q8WWA1 MDK-202ENST00000395565 951 ntAPPRIS P2 TSL 2 BASIC25.93■■□□□ 1.74
TMEM40Q8WWA1 SENP5-202ENST00000419026 973 ntTSL 3 BASIC25.93■■□□□ 1.74
TMEM40Q8WWA1 DNAJC4-212ENST00000628077 938 ntTSL 5 BASIC25.93■■□□□ 1.74
TMEM40Q8WWA1 AL121749.1-202ENST00000609313 2153 ntBASIC25.93■■□□□ 1.74
TMEM40Q8WWA1 FADD-201ENST00000301838 1841 ntAPPRIS P1 TSL 1 (best) BASIC25.93■■□□□ 1.74
TMEM40Q8WWA1 ZNF768-201ENST00000380412 2315 ntAPPRIS P2 TSL 1 (best) BASIC25.92■■□□□ 1.74
TMEM40Q8WWA1 GGA1-204ENST00000381756 2107 ntTSL 1 (best) BASIC25.92■■□□□ 1.74
TMEM40Q8WWA1 H2AFB1-201ENST00000620016 587 ntAPPRIS P1 BASIC25.92■■□□□ 1.74
TMEM40Q8WWA1 BIN1-211ENST00000409400 2143 ntTSL 1 (best) BASIC25.91■■□□□ 1.74
TMEM40Q8WWA1 WIPI2-204ENST00000404704 1663 ntTSL 5 BASIC25.91■■□□□ 1.74
TMEM40Q8WWA1 ARTN-203ENST00000414809 1943 ntAPPRIS P4 TSL 3 BASIC25.91■■□□□ 1.74
TMEM40Q8WWA1 DRAP1-201ENST00000312515 989 ntAPPRIS P1 TSL 1 (best) BASIC25.91■■□□□ 1.74
TMEM40Q8WWA1 CCR10-201ENST00000332438 1773 ntAPPRIS P1 TSL 1 (best) BASIC25.91■■□□□ 1.74
TMEM40Q8WWA1 MROH6-211ENST00000534459 1789 ntAPPRIS ALT2 TSL 2 BASIC25.91■■□□□ 1.74
TMEM40Q8WWA1 PLSCR3-214ENST00000619711 2066 ntTSL 5 BASIC25.91■■□□□ 1.74
TMEM40Q8WWA1 DHRS13-202ENST00000394901 2037 ntTSL 1 (best) BASIC25.9■■□□□ 1.74
TMEM40Q8WWA1 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC25.9■■□□□ 1.74
TMEM40Q8WWA1 SRP68-202ENST00000539137 2386 ntTSL 2 BASIC25.9■■□□□ 1.74
TMEM40Q8WWA1 RNF166-201ENST00000312838 1883 ntAPPRIS P1 TSL 1 (best) BASIC25.9■■□□□ 1.74
TMEM40Q8WWA1 GATA4-209ENST00000622443 1982 ntTSL 5 BASIC25.9■■□□□ 1.74
TMEM40Q8WWA1 NKIRAS2-209ENST00000479407 992 ntTSL 3 BASIC25.9■■□□□ 1.74
TMEM40Q8WWA1 TSEN34-204ENST00000429671 1912 ntTSL 2 BASIC25.9■■□□□ 1.74
TMEM40Q8WWA1 HDGF-201ENST00000357325 2380 ntAPPRIS P1 TSL 1 (best) BASIC25.9■■□□□ 1.74
TMEM40Q8WWA1 RRAD-201ENST00000299759 1569 ntAPPRIS P1 TSL 1 (best) BASIC25.9■■□□□ 1.74
TMEM40Q8WWA1 FHL2-203ENST00000358129 1578 ntTSL 5 BASIC25.9■■□□□ 1.74
TMEM40Q8WWA1 SNRNP70-206ENST00000598441 1574 ntAPPRIS P1 TSL 1 (best) BASIC25.9■■□□□ 1.74
TMEM40Q8WWA1 KAT8-202ENST00000448516 1789 ntTSL 1 (best) BASIC25.9■■□□□ 1.74
TMEM40Q8WWA1 ZNF747-203ENST00000568028 1511 ntAPPRIS P1 TSL 2 BASIC25.89■■□□□ 1.74
TMEM40Q8WWA1 PFN2-210ENST00000481767 1620 ntTSL 2 BASIC25.89■■□□□ 1.74
TMEM40Q8WWA1 RUNDC3A-201ENST00000225441 1821 ntTSL 1 (best) BASIC25.89■■□□□ 1.74
TMEM40Q8WWA1 KANSL2-215ENST00000553086 1830 ntTSL 5 BASIC25.89■■□□□ 1.74
TMEM40Q8WWA1 AQP1-202ENST00000409611 1140 ntTSL 1 (best) BASIC25.89■■□□□ 1.74
TMEM40Q8WWA1 SUMF1-205ENST00000458465 1102 ntTSL 2 BASIC25.89■■□□□ 1.74
TMEM40Q8WWA1 NAA30-203ENST00000555166 1294 ntAPPRIS ALT2 TSL 2 BASIC25.89■■□□□ 1.74
TMEM40Q8WWA1 ZNF784-202ENST00000591479 1559 ntTSL 1 (best) BASIC25.89■■□□□ 1.73
TMEM40Q8WWA1 CEND1-201ENST00000330106 1649 ntAPPRIS P1 TSL 1 (best) BASIC25.88■■□□□ 1.73
TMEM40Q8WWA1 NXPH4-201ENST00000349394 1804 ntAPPRIS P1 TSL 1 (best) BASIC25.88■■□□□ 1.73
TMEM40Q8WWA1 RCCD1-203ENST00000555155 1871 ntAPPRIS ALT1 TSL 5 BASIC25.88■■□□□ 1.73
TMEM40Q8WWA1 MCRIP1-210ENST00000576431 577 ntTSL 5 BASIC25.88■■□□□ 1.73
TMEM40Q8WWA1 FEZ2-204ENST00000405912 1931 ntTSL 1 (best) BASIC25.88■■□□□ 1.73
TMEM40Q8WWA1 TMEM260-202ENST00000538838 1638 ntTSL 1 (best) BASIC25.88■■□□□ 1.73
TMEM40Q8WWA1 MOB4-204ENST00000409360 1447 ntTSL 5 BASIC25.88■■□□□ 1.73
TMEM40Q8WWA1 AF131216.4-201ENST00000638924 1588 ntBASIC25.87■■□□□ 1.73
TMEM40Q8WWA1 BCAP31-207ENST00000458587 1810 ntTSL 1 (best) BASIC25.87■■□□□ 1.73
TMEM40Q8WWA1 SSSCA1-AS1-201ENST00000567594 614 ntBASIC25.87■■□□□ 1.73
TMEM40Q8WWA1 GNB2-203ENST00000393926 1641 ntAPPRIS P1 TSL 5 BASIC25.87■■□□□ 1.73
TMEM40Q8WWA1 RAB40C-204ENST00000538492 2569 ntAPPRIS P1 TSL 2 BASIC25.87■■□□□ 1.73
TMEM40Q8WWA1 VRK2-202ENST00000412104 1916 ntTSL 1 (best) BASIC25.86■■□□□ 1.73
TMEM40Q8WWA1 AC008406.3-201ENST00000620001 1374 ntBASIC25.86■■□□□ 1.73
TMEM40Q8WWA1 MAPKAP1-207ENST00000394060 1586 ntTSL 1 (best) BASIC25.86■■□□□ 1.73
TMEM40Q8WWA1 AC010501.1-201ENST00000606270 1962 ntBASIC25.86■■□□□ 1.73
TMEM40Q8WWA1 CYB5R3-201ENST00000352397 2124 ntAPPRIS P1 TSL 1 (best) BASIC25.85■■□□□ 1.73
TMEM40Q8WWA1 AC097639.1-201ENST00000565519 1891 ntBASIC25.85■■□□□ 1.73
TMEM40Q8WWA1 ARL4D-201ENST00000320033 1612 ntAPPRIS P1 TSL 1 (best) BASIC25.85■■□□□ 1.73
TMEM40Q8WWA1 CLDN15-201ENST00000308344 1370 ntAPPRIS P1 TSL 1 (best) BASIC25.85■■□□□ 1.73
TMEM40Q8WWA1 WBP1-203ENST00000409737 1110 ntAPPRIS ALT1 TSL 5 BASIC25.85■■□□□ 1.73
TMEM40Q8WWA1 LSM7-203ENST00000585409 512 ntTSL 2 BASIC25.85■■□□□ 1.73
TMEM40Q8WWA1 GDF6-202ENST00000620978 973 ntTSL 1 (best) BASIC25.85■■□□□ 1.73
TMEM40Q8WWA1 LRRC1-201ENST00000370882 808 ntTSL 3 BASIC25.84■■□□□ 1.73
TMEM40Q8WWA1 C9orf40-201ENST00000376854 2327 ntAPPRIS P1 TSL 1 (best) BASIC25.84■■□□□ 1.73
TMEM40Q8WWA1 ZIC2-201ENST00000376335 2983 ntAPPRIS P1 TSL 1 (best) BASIC25.84■■□□□ 1.73
TMEM40Q8WWA1 LRRC61-205ENST00000493307 1456 ntAPPRIS P1 TSL 5 BASIC25.84■■□□□ 1.73
TMEM40Q8WWA1 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC25.84■■□□□ 1.73
TMEM40Q8WWA1 BTBD6-205ENST00000536364 1973 ntAPPRIS P2 TSL 5 BASIC25.84■■□□□ 1.73
TMEM40Q8WWA1 NR6A1-201ENST00000344523 1846 ntAPPRIS ALT2 TSL 5 BASIC25.84■■□□□ 1.73
TMEM40Q8WWA1 YRDC-201ENST00000373044 1826 ntAPPRIS P1 TSL 1 (best) BASIC25.84■■□□□ 1.73
TMEM40Q8WWA1 PPP1CC-206ENST00000550991 1882 ntTSL 2 BASIC25.83■■□□□ 1.73
TMEM40Q8WWA1 DHRS11-215ENST00000618403 1598 ntAPPRIS P1 TSL 1 (best) BASIC25.83■■□□□ 1.73
TMEM40Q8WWA1 FKBP8-213ENST00000608443 1849 ntAPPRIS P3 TSL 1 (best) BASIC25.83■■□□□ 1.73
TMEM40Q8WWA1 NPDC1-201ENST00000371600 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC25.83■■□□□ 1.73
TMEM40Q8WWA1 BICDL2-203ENST00000572449 1984 ntAPPRIS P1 TSL 5 BASIC25.82■■□□□ 1.72
TMEM40Q8WWA1 TK2-202ENST00000417693 1046 ntTSL 2 BASIC25.82■■□□□ 1.72
TMEM40Q8WWA1 AC092807.3-205ENST00000467666 531 ntTSL 3 BASIC25.82■■□□□ 1.72
TMEM40Q8WWA1 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC25.82■■□□□ 1.72
Retrieved 100 of 98,524 protein–RNA pairs in 21.1 ms