Protein–RNA interactions for Protein: Q8TDX6

CSGALNACT1, Chondroitin sulfate N-acetylgalactosaminyltransferase 1, humanhuman

Predictions only

Length 532 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSGALNACT1Q8TDX6 PLEK2-201ENST00000216446 1549 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
CSGALNACT1Q8TDX6 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC24.42■■□□□ 1.5
CSGALNACT1Q8TDX6 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC24.42■■□□□ 1.5
CSGALNACT1Q8TDX6 AL117332.1-201ENST00000622628 974 ntBASIC24.42■■□□□ 1.5
CSGALNACT1Q8TDX6 IL15RA-214ENST00000525219 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC24.42■■□□□ 1.5
CSGALNACT1Q8TDX6 SYT7-202ENST00000535826 1621 ntTSL 5 BASIC24.42■■□□□ 1.5
CSGALNACT1Q8TDX6 THRA-204ENST00000546243 1909 ntAPPRIS P1 TSL 2 BASIC24.41■■□□□ 1.5
CSGALNACT1Q8TDX6 BCKDHB-202ENST00000356489 1514 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
CSGALNACT1Q8TDX6 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC24.41■■□□□ 1.5
CSGALNACT1Q8TDX6 LRRC1-201ENST00000370882 808 ntTSL 3 BASIC24.41■■□□□ 1.5
CSGALNACT1Q8TDX6 WBP1-203ENST00000409737 1110 ntAPPRIS ALT1 TSL 5 BASIC24.41■■□□□ 1.5
CSGALNACT1Q8TDX6 UBALD1-201ENST00000283474 1413 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
CSGALNACT1Q8TDX6 APLP1-201ENST00000221891 2495 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
CSGALNACT1Q8TDX6 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC24.41■■□□□ 1.5
CSGALNACT1Q8TDX6 MADCAM1-202ENST00000346144 1309 ntAPPRIS ALT2 TSL 1 (best) BASIC24.4■■□□□ 1.5
CSGALNACT1Q8TDX6 AL356740.2-201ENST00000601559 647 ntBASIC24.4■■□□□ 1.5
CSGALNACT1Q8TDX6 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC24.4■■□□□ 1.5
CSGALNACT1Q8TDX6 Z98883.1-202ENST00000635107 1289 ntTSL 5 BASIC24.4■■□□□ 1.5
CSGALNACT1Q8TDX6 AC005551.1-201ENST00000641816 493 ntAPPRIS P1 BASIC24.4■■□□□ 1.5
CSGALNACT1Q8TDX6 RAB20-201ENST00000267328 1518 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
CSGALNACT1Q8TDX6 U2AF1-204ENST00000459639 1675 ntTSL 1 (best) BASIC24.4■■□□□ 1.5
CSGALNACT1Q8TDX6 U2AF1L5-204ENST00000623375 1675 ntTSL 1 (best) BASIC24.4■■□□□ 1.5
CSGALNACT1Q8TDX6 NPB-202ENST00000573081 2154 ntAPPRIS ALT2 BASIC24.39■■□□□ 1.5
CSGALNACT1Q8TDX6 EIF4EBP1-201ENST00000338825 1020 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.49
CSGALNACT1Q8TDX6 TK2-202ENST00000417693 1046 ntTSL 2 BASIC24.39■■□□□ 1.49
CSGALNACT1Q8TDX6 PRSS21-201ENST00000005995 1101 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.49
CSGALNACT1Q8TDX6 CTU1-201ENST00000421832 2087 ntAPPRIS P1 TSL 2 BASIC24.39■■□□□ 1.49
CSGALNACT1Q8TDX6 ROM1-201ENST00000278833 1878 ntAPPRIS P2 TSL 1 (best) BASIC24.38■■□□□ 1.49
CSGALNACT1Q8TDX6 TOMM40-203ENST00000426677 1725 ntAPPRIS P2 TSL 1 (best) BASIC24.38■■□□□ 1.49
CSGALNACT1Q8TDX6 TMEM134-202ENST00000393877 823 ntTSL 1 (best) BASIC24.38■■□□□ 1.49
CSGALNACT1Q8TDX6 EIF3J-203ENST00000535391 925 ntTSL 2 BASIC24.38■■□□□ 1.49
CSGALNACT1Q8TDX6 MIR3621-201ENST00000580529 85 ntBASIC24.38■■□□□ 1.49
CSGALNACT1Q8TDX6 AL445237.1-202ENST00000604581 425 ntTSL 5 BASIC24.38■■□□□ 1.49
CSGALNACT1Q8TDX6 MOB4-204ENST00000409360 1447 ntTSL 5 BASIC24.37■■□□□ 1.49
CSGALNACT1Q8TDX6 PCGF3-202ENST00000400151 1175 ntTSL 2 BASIC24.37■■□□□ 1.49
CSGALNACT1Q8TDX6 FAM228B-208ENST00000613899 1238 ntAPPRIS ALT2 TSL 1 (best) BASIC24.37■■□□□ 1.49
CSGALNACT1Q8TDX6 IHH-201ENST00000295731 2023 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
CSGALNACT1Q8TDX6 NRM-201ENST00000259953 1755 ntAPPRIS P2 TSL 2 BASIC24.37■■□□□ 1.49
CSGALNACT1Q8TDX6 CTSA-203ENST00000372459 1972 ntTSL 1 (best) BASIC24.36■■□□□ 1.49
CSGALNACT1Q8TDX6 KRTAP5-1-201ENST00000382171 942 ntAPPRIS P1 BASIC24.36■■□□□ 1.49
CSGALNACT1Q8TDX6 SENP5-202ENST00000419026 973 ntTSL 3 BASIC24.36■■□□□ 1.49
CSGALNACT1Q8TDX6 AC079305.3-201ENST00000455416 218 ntTSL 5 BASIC24.36■■□□□ 1.49
CSGALNACT1Q8TDX6 EPHA10-211ENST00000540011 720 ntTSL 5 BASIC24.36■■□□□ 1.49
CSGALNACT1Q8TDX6 CALM1-203ENST00000544280 1064 ntTSL 1 (best) BASIC24.36■■□□□ 1.49
CSGALNACT1Q8TDX6 C12orf75-207ENST00000552457 689 ntTSL 5 BASIC24.36■■□□□ 1.49
CSGALNACT1Q8TDX6 SSSCA1-AS1-201ENST00000567594 614 ntBASIC24.36■■□□□ 1.49
CSGALNACT1Q8TDX6 EXOG-217ENST00000630638 197 ntTSL 5 BASIC24.36■■□□□ 1.49
CSGALNACT1Q8TDX6 AL121749.1-202ENST00000609313 2153 ntBASIC24.36■■□□□ 1.49
CSGALNACT1Q8TDX6 HAND2-201ENST00000359562 2780 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
CSGALNACT1Q8TDX6 SHF-208ENST00000560734 1731 ntTSL 3 BASIC24.35■■□□□ 1.49
CSGALNACT1Q8TDX6 EVA1C-203ENST00000401402 1558 ntTSL 5 BASIC24.35■■□□□ 1.49
CSGALNACT1Q8TDX6 LSM4-201ENST00000252816 986 ntTSL 2 BASIC24.35■■□□□ 1.49
CSGALNACT1Q8TDX6 AQP1-202ENST00000409611 1140 ntTSL 1 (best) BASIC24.35■■□□□ 1.49
CSGALNACT1Q8TDX6 AC004540.2-202ENST00000451264 508 ntTSL 2 BASIC24.35■■□□□ 1.49
CSGALNACT1Q8TDX6 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC24.35■■□□□ 1.49
CSGALNACT1Q8TDX6 TMC6-218ENST00000591436 1155 ntTSL 1 (best) BASIC24.35■■□□□ 1.49
CSGALNACT1Q8TDX6 AC093762.1-201ENST00000641981 837 ntAPPRIS P1 BASIC24.35■■□□□ 1.49
CSGALNACT1Q8TDX6 SENP3-201ENST00000321337 2611 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
CSGALNACT1Q8TDX6 PFN2-210ENST00000481767 1620 ntTSL 2 BASIC24.35■■□□□ 1.49
CSGALNACT1Q8TDX6 HOMER3-203ENST00000433218 1418 ntAPPRIS ALT1 TSL 5 BASIC24.35■■□□□ 1.49
CSGALNACT1Q8TDX6 R3HCC1-201ENST00000265806 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC24.34■■□□□ 1.49
CSGALNACT1Q8TDX6 TTC3-225ENST00000540756 2025 ntTSL 2 BASIC24.34■■□□□ 1.49
CSGALNACT1Q8TDX6 VIPR2-203ENST00000402066 1926 ntAPPRIS ALT2 TSL 5 BASIC24.33■■□□□ 1.49
CSGALNACT1Q8TDX6 ACAA1-220ENST00000627515 1862 ntTSL 5 BASIC24.33■■□□□ 1.49
CSGALNACT1Q8TDX6 NPW-201ENST00000329610 498 ntAPPRIS P2 TSL 1 (best) BASIC24.33■■□□□ 1.49
CSGALNACT1Q8TDX6 AK3-203ENST00000447596 705 ntTSL 2 BASIC24.33■■□□□ 1.49
CSGALNACT1Q8TDX6 AL117336.3-202ENST00000605499 489 ntTSL 3 BASIC24.33■■□□□ 1.49
CSGALNACT1Q8TDX6 NAPA-201ENST00000263354 1839 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.48
CSGALNACT1Q8TDX6 FKBP8-213ENST00000608443 1849 ntAPPRIS P3 TSL 1 (best) BASIC24.33■■□□□ 1.48
CSGALNACT1Q8TDX6 LYL1-201ENST00000264824 1490 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
CSGALNACT1Q8TDX6 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC24.32■■□□□ 1.48
CSGALNACT1Q8TDX6 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC24.32■■□□□ 1.48
CSGALNACT1Q8TDX6 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC24.32■■□□□ 1.48
CSGALNACT1Q8TDX6 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC24.32■■□□□ 1.48
CSGALNACT1Q8TDX6 SENCR-201ENST00000526269 1298 ntTSL 1 (best) BASIC24.32■■□□□ 1.48
CSGALNACT1Q8TDX6 TSPAN4-203ENST00000397397 1423 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
CSGALNACT1Q8TDX6 C11orf80-204ENST00000525908 2135 ntAPPRIS P3 TSL 2 BASIC24.32■■□□□ 1.48
CSGALNACT1Q8TDX6 CADPS-215ENST00000490353 2669 ntTSL 5 BASIC24.32■■□□□ 1.48
CSGALNACT1Q8TDX6 POLE2-201ENST00000216367 1776 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
CSGALNACT1Q8TDX6 PSMG1-201ENST00000331573 2154 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
CSGALNACT1Q8TDX6 UCK1-204ENST00000372215 2167 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
CSGALNACT1Q8TDX6 TMEM80-201ENST00000397510 1094 ntAPPRIS P2 TSL 5 BASIC24.31■■□□□ 1.48
CSGALNACT1Q8TDX6 AL357078.1-201ENST00000448344 310 ntTSL 4 BASIC24.31■■□□□ 1.48
CSGALNACT1Q8TDX6 SLC35A2-209ENST00000452555 1563 ntTSL 2 BASIC24.31■■□□□ 1.48
CSGALNACT1Q8TDX6 RPP38-201ENST00000378197 1457 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
CSGALNACT1Q8TDX6 ZNF74-204ENST00000405993 1839 ntAPPRIS ALT2 TSL 5 BASIC24.31■■□□□ 1.48
CSGALNACT1Q8TDX6 ADRM1-205ENST00000620230 1361 ntTSL 5 BASIC24.3■■□□□ 1.48
CSGALNACT1Q8TDX6 ZNF653-201ENST00000293771 2240 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
CSGALNACT1Q8TDX6 HNRNPD-203ENST00000353341 1585 ntAPPRIS ALT1 TSL 1 (best) BASIC24.3■■□□□ 1.48
CSGALNACT1Q8TDX6 SPAG16-201ENST00000272898 1059 ntTSL 5 BASIC24.3■■□□□ 1.48
CSGALNACT1Q8TDX6 CLTA-204ENST00000433436 1235 ntAPPRIS ALT1 TSL 1 (best) BASIC24.3■■□□□ 1.48
CSGALNACT1Q8TDX6 FEZ1-205ENST00000524435 750 ntTSL 2 BASIC24.3■■□□□ 1.48
CSGALNACT1Q8TDX6 SLC25A39-203ENST00000537904 1274 ntTSL 2 BASIC24.3■■□□□ 1.48
CSGALNACT1Q8TDX6 CLTA-209ENST00000538225 1181 ntTSL 2 BASIC24.3■■□□□ 1.48
CSGALNACT1Q8TDX6 CLTA-210ENST00000540080 989 ntTSL 2 BASIC24.3■■□□□ 1.48
CSGALNACT1Q8TDX6 CASP9-202ENST00000348549 1621 ntTSL 1 (best) BASIC24.3■■□□□ 1.48
CSGALNACT1Q8TDX6 FSD1-204ENST00000597590 1634 ntTSL 5 BASIC24.3■■□□□ 1.48
CSGALNACT1Q8TDX6 DPY19L1-209ENST00000638088 5075 ntAPPRIS ALT2 TSL 5 BASIC24.3■■□□□ 1.48
CSGALNACT1Q8TDX6 JMJD1C-AS1-201ENST00000609436 1335 ntBASIC24.3■■□□□ 1.48
CSGALNACT1Q8TDX6 RTN2-202ENST00000344680 2063 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
Retrieved 100 of 98,524 protein–RNA pairs in 18.5 ms