Protein–RNA interactions for Protein: Q8TBB1

LNX1, E3 ubiquitin-protein ligase LNX, humanhuman

Predicted RBP Predictions only

Length 728 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LNX1Q8TBB1 UBE2E3-202ENST00000410062 1570 ntAPPRIS P1 TSL 1 (best) BASIC25.77■■□□□ 1.72
LNX1Q8TBB1 PNMT-201ENST00000269582 1253 ntAPPRIS P1 TSL 1 (best) BASIC25.76■■□□□ 1.71
LNX1Q8TBB1 AL031848.2-201ENST00000607670 837 ntBASIC25.76■■□□□ 1.71
LNX1Q8TBB1 GAL3ST2-201ENST00000192314 1370 ntAPPRIS P1 TSL 1 (best) BASIC25.76■■□□□ 1.71
LNX1Q8TBB1 FANCE-201ENST00000229769 2554 ntAPPRIS P1 TSL 1 (best) BASIC25.75■■□□□ 1.71
LNX1Q8TBB1 LHX3-201ENST00000371746 2403 ntAPPRIS P1 TSL 1 (best) BASIC25.75■■□□□ 1.71
LNX1Q8TBB1 DACT1-206ENST00000556859 2239 ntAPPRIS ALT2 TSL 2 BASIC25.75■■□□□ 1.71
LNX1Q8TBB1 GTPBP3-203ENST00000361619 1894 ntTSL 2 BASIC25.75■■□□□ 1.71
LNX1Q8TBB1 RDH14-201ENST00000381249 1587 ntAPPRIS P1 TSL 1 (best) BASIC25.75■■□□□ 1.71
LNX1Q8TBB1 HSBP1L1-201ENST00000451882 771 ntAPPRIS P1 TSL 1 (best) BASIC25.75■■□□□ 1.71
LNX1Q8TBB1 PRTG-204ENST00000561292 833 ntTSL 3 BASIC25.75■■□□□ 1.71
LNX1Q8TBB1 EME2-205ENST00000568449 1234 ntAPPRIS P1 TSL 1 (best) BASIC25.75■■□□□ 1.71
LNX1Q8TBB1 PORCN-203ENST00000359882 1877 ntAPPRIS ALT1 TSL 5 BASIC25.74■■□□□ 1.71
LNX1Q8TBB1 CT47A7-201ENST00000434883 1288 ntAPPRIS P1 TSL 2 BASIC25.74■■□□□ 1.71
LNX1Q8TBB1 TMPO-AS1-201ENST00000546421 738 ntTSL 5 BASIC25.74■■□□□ 1.71
LNX1Q8TBB1 AGAP1-202ENST00000336665 5427 ntAPPRIS P3 TSL 1 (best) BASIC25.74■■□□□ 1.71
LNX1Q8TBB1 MAP3K3-210ENST00000584573 2480 ntTSL 1 (best) BASIC25.73■■□□□ 1.71
LNX1Q8TBB1 FKBP8-213ENST00000608443 1849 ntAPPRIS P3 TSL 1 (best) BASIC25.73■■□□□ 1.71
LNX1Q8TBB1 C5orf38-202ENST00000397835 681 ntAPPRIS ALT2 TSL 5 BASIC25.73■■□□□ 1.71
LNX1Q8TBB1 HES6-204ENST00000409182 863 ntTSL 2 BASIC25.73■■□□□ 1.71
LNX1Q8TBB1 NDEL1-219ENST00000585098 454 ntTSL 3 BASIC25.73■■□□□ 1.71
LNX1Q8TBB1 ANKS3-204ENST00000585773 1946 ntTSL 2 BASIC25.73■■□□□ 1.71
LNX1Q8TBB1 PKIG-206ENST00000372892 1338 ntAPPRIS P1 TSL 2 BASIC25.72■■□□□ 1.71
LNX1Q8TBB1 RBFA-201ENST00000262197 1219 ntTSL 1 (best) BASIC25.72■■□□□ 1.71
LNX1Q8TBB1 AC055876.1-201ENST00000430589 895 ntTSL 2 BASIC25.72■■□□□ 1.71
LNX1Q8TBB1 MTERF3-204ENST00000523821 1529 ntTSL 1 (best) BASIC25.72■■□□□ 1.71
LNX1Q8TBB1 NPAS3-203ENST00000357798 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC25.72■■□□□ 1.71
LNX1Q8TBB1 ESRRA-203ENST00000406310 2218 ntAPPRIS ALT1 TSL 1 (best) BASIC25.71■■□□□ 1.71
LNX1Q8TBB1 MAPKAP1-207ENST00000394060 1586 ntTSL 1 (best) BASIC25.71■■□□□ 1.71
LNX1Q8TBB1 FOXP1-201ENST00000318779 843 ntTSL 1 (best) BASIC25.71■■□□□ 1.71
LNX1Q8TBB1 CENPX-202ENST00000392359 805 ntAPPRIS P1 TSL 2 BASIC25.71■■□□□ 1.71
LNX1Q8TBB1 SH2B1-205ENST00000538342 1532 ntTSL 2 BASIC25.71■■□□□ 1.71
LNX1Q8TBB1 KRT72-202ENST00000354310 1764 ntTSL 2 BASIC25.71■■□□□ 1.71
LNX1Q8TBB1 SHD-201ENST00000543264 2577 ntAPPRIS P1 TSL 1 (best) BASIC25.7■■□□□ 1.71
LNX1Q8TBB1 SNX21-204ENST00000372542 1824 ntAPPRIS P1 TSL 2 BASIC25.7■■□□□ 1.71
LNX1Q8TBB1 BIN1-210ENST00000393041 2272 ntTSL 1 (best) BASIC25.7■■□□□ 1.7
LNX1Q8TBB1 C8orf58-201ENST00000289989 2016 ntAPPRIS P3 TSL 5 BASIC25.7■■□□□ 1.7
LNX1Q8TBB1 EVA1B-201ENST00000270824 1054 ntAPPRIS P1 TSL 2 BASIC25.7■■□□□ 1.7
LNX1Q8TBB1 KRT18P10-201ENST00000388836 1287 ntBASIC25.7■■□□□ 1.7
LNX1Q8TBB1 MDK-203ENST00000395566 828 ntAPPRIS P2 TSL 1 (best) BASIC25.7■■□□□ 1.7
LNX1Q8TBB1 OR2A1-AS1-204ENST00000470435 602 ntBASIC25.7■■□□□ 1.7
LNX1Q8TBB1 TMEM170A-202ENST00000561878 1072 ntAPPRIS P1 TSL 1 (best) BASIC25.7■■□□□ 1.7
LNX1Q8TBB1 AC009163.4-201ENST00000567194 530 ntAPPRIS P1 TSL 2 BASIC25.7■■□□□ 1.7
LNX1Q8TBB1 AC010913.1-201ENST00000608612 420 ntTSL 2 BASIC25.7■■□□□ 1.7
LNX1Q8TBB1 USP2-204ENST00000525735 1704 ntAPPRIS ALT1 TSL 1 (best) BASIC25.7■■□□□ 1.7
LNX1Q8TBB1 HAS2-AS1-201ENST00000514180 1656 ntTSL 1 (best) BASIC25.7■■□□□ 1.7
LNX1Q8TBB1 CASP9-201ENST00000333868 2019 ntAPPRIS P2 TSL 1 (best) BASIC25.7■■□□□ 1.7
LNX1Q8TBB1 NR2F1-AS1-214ENST00000607831 1963 ntTSL 2 BASIC25.69■■□□□ 1.7
LNX1Q8TBB1 SRPK3-205ENST00000393786 1900 ntAPPRIS ALT2 TSL 1 (best) BASIC25.69■■□□□ 1.7
LNX1Q8TBB1 LRP11-202ENST00000367368 1042 ntTSL 2 BASIC25.69■■□□□ 1.7
LNX1Q8TBB1 CARMIL1-202ENST00000461945 1290 ntTSL 1 (best) BASIC25.69■■□□□ 1.7
LNX1Q8TBB1 OXLD1-203ENST00000571503 803 ntTSL 2 BASIC25.69■■□□□ 1.7
LNX1Q8TBB1 SNAI3-AS1-204ENST00000567997 2048 ntBASIC25.69■■□□□ 1.7
LNX1Q8TBB1 KHSRP-201ENST00000398148 2993 ntAPPRIS P2 TSL 1 (best) BASIC25.69■■□□□ 1.7
LNX1Q8TBB1 NFKBIE-201ENST00000275015 2581 ntTSL 1 (best) BASIC25.69■■□□□ 1.7
LNX1Q8TBB1 REEP6-201ENST00000233596 1794 ntAPPRIS P2 TSL 1 (best) BASIC25.69■■□□□ 1.7
LNX1Q8TBB1 PLEKHA8-201ENST00000258679 2293 ntTSL 1 (best) BASIC25.68■■□□□ 1.7
LNX1Q8TBB1 AL160276.1-201ENST00000636672 1312 ntAPPRIS P1 TSL 5 BASIC25.68■■□□□ 1.7
LNX1Q8TBB1 ARRB2-210ENST00000572457 1660 ntTSL 5 BASIC25.68■■□□□ 1.7
LNX1Q8TBB1 OSCAR-206ENST00000391760 629 ntTSL 2 BASIC25.68■■□□□ 1.7
LNX1Q8TBB1 CDCA5-202ENST00000404147 1012 ntTSL 2 BASIC25.68■■□□□ 1.7
LNX1Q8TBB1 RING1-201ENST00000374656 1752 ntAPPRIS P1 TSL 1 (best) BASIC25.68■■□□□ 1.7
LNX1Q8TBB1 PIP5K1C-203ENST00000539785 2289 ntAPPRIS ALT2 TSL 2 BASIC25.68■■□□□ 1.7
LNX1Q8TBB1 MLST8-219ENST00000565250 1588 ntAPPRIS P3 TSL 3 BASIC25.68■■□□□ 1.7
LNX1Q8TBB1 NRG1-210ENST00000520407 1955 ntTSL 1 (best) BASIC25.67■■□□□ 1.7
LNX1Q8TBB1 PPP4C-214ENST00000627746 1301 ntTSL 5 BASIC25.67■■□□□ 1.7
LNX1Q8TBB1 GUSBP5-201ENST00000418136 578 ntBASIC25.67■■□□□ 1.7
LNX1Q8TBB1 E2F5-203ENST00000418930 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC25.67■■□□□ 1.7
LNX1Q8TBB1 LAT-217ENST00000630764 610 ntAPPRIS ALT2 TSL 5 BASIC25.67■■□□□ 1.7
LNX1Q8TBB1 MED17-227ENST00000640521 2047 ntTSL 5 BASIC25.67■■□□□ 1.7
LNX1Q8TBB1 ZNF365-206ENST00000395255 1674 ntTSL 1 (best) BASIC25.67■■□□□ 1.7
LNX1Q8TBB1 ZNF263-204ENST00000573578 1636 ntTSL 5 BASIC25.66■■□□□ 1.7
LNX1Q8TBB1 CYS1-201ENST00000381813 2738 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
LNX1Q8TBB1 C15orf59-201ENST00000379822 1342 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
LNX1Q8TBB1 FCRLB-205ENST00000367948 1977 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
LNX1Q8TBB1 SLC52A2-208ENST00000527078 1790 ntAPPRIS P1 TSL 5 BASIC25.66■■□□□ 1.7
LNX1Q8TBB1 RHOF-203ENST00000537171 1485 ntTSL 1 (best) BASIC25.66■■□□□ 1.7
LNX1Q8TBB1 BIN1-206ENST00000352848 2209 ntTSL 1 (best) BASIC25.65■■□□□ 1.7
LNX1Q8TBB1 BOD1-202ENST00000311086 1562 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
LNX1Q8TBB1 MROH6-210ENST00000533679 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC25.65■■□□□ 1.7
LNX1Q8TBB1 CHST13-201ENST00000319340 1789 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
LNX1Q8TBB1 FKBP1A-211ENST00000618612 1518 ntTSL 1 (best) BASIC25.65■■□□□ 1.7
LNX1Q8TBB1 AC018413.1-201ENST00000581996 1200 ntTSL 2 BASIC25.65■■□□□ 1.7
LNX1Q8TBB1 IFNL4-201ENST00000606380 1637 ntAPPRIS P5 TSL 1 (best) BASIC25.65■■□□□ 1.7
LNX1Q8TBB1 PACS2-201ENST00000325438 3708 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
LNX1Q8TBB1 AC022211.4-201ENST00000625094 2161 ntBASIC25.65■■□□□ 1.7
LNX1Q8TBB1 PKM-204ENST00000449901 2526 ntTSL 2 BASIC25.65■■□□□ 1.7
LNX1Q8TBB1 KRT72-201ENST00000293745 2015 ntAPPRIS P1 TSL 1 (best) BASIC25.64■■□□□ 1.7
LNX1Q8TBB1 EGR4-201ENST00000436467 2377 ntAPPRIS ALT2 TSL 1 (best) BASIC25.64■■□□□ 1.7
LNX1Q8TBB1 AC142381.3-201ENST00000568208 1670 ntBASIC25.64■■□□□ 1.69
LNX1Q8TBB1 SCTR-201ENST00000019103 1865 ntAPPRIS P1 TSL 1 (best) BASIC25.64■■□□□ 1.69
LNX1Q8TBB1 TSKU-201ENST00000333090 2712 ntAPPRIS P1 TSL 1 (best) BASIC25.64■■□□□ 1.69
LNX1Q8TBB1 FPGS-221ENST00000630236 2160 ntTSL 5 BASIC25.63■■□□□ 1.69
LNX1Q8TBB1 TMEM104-205ENST00000582773 1740 ntTSL 2 BASIC25.63■■□□□ 1.69
LNX1Q8TBB1 TMEM54-201ENST00000329151 871 ntTSL 1 (best) BASIC25.63■■□□□ 1.69
LNX1Q8TBB1 PRR7-204ENST00000510492 1285 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
LNX1Q8TBB1 TK2-216ENST00000564917 1156 ntTSL 3 BASIC25.63■■□□□ 1.69
LNX1Q8TBB1 AC090241.2-201ENST00000602329 432 ntTSL 4 BASIC25.63■■□□□ 1.69
LNX1Q8TBB1 TST-202ENST00000403892 1797 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
LNX1Q8TBB1 MAZ-203ENST00000545521 2333 ntTSL 1 (best) BASIC25.63■■□□□ 1.69
Retrieved 100 of 98,524 protein–RNA pairs in 20.8 ms