Protein–RNA interactions for Protein: Q8TB33

LINC01560, Putative uncharacterized protein encoded by LINC01560, humanhuman

Predictions only

Length 94 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01560Q8TB33 PFN2-210ENST00000481767 1620 ntTSL 2 BASIC20.59■□□□□ 0.89
LINC01560Q8TB33 USP2-204ENST00000525735 1704 ntAPPRIS ALT1 TSL 1 (best) BASIC20.58■□□□□ 0.89
LINC01560Q8TB33 ZNF74-204ENST00000405993 1839 ntAPPRIS ALT2 TSL 5 BASIC20.58■□□□□ 0.89
LINC01560Q8TB33 TMEM55B-201ENST00000250489 1961 ntAPPRIS P3 TSL 1 (best) BASIC20.58■□□□□ 0.89
LINC01560Q8TB33 TK2-202ENST00000417693 1046 ntTSL 2 BASIC20.58■□□□□ 0.89
LINC01560Q8TB33 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC20.58■□□□□ 0.89
LINC01560Q8TB33 AL117332.1-201ENST00000622628 974 ntBASIC20.58■□□□□ 0.89
LINC01560Q8TB33 HNRNPD-203ENST00000353341 1585 ntAPPRIS ALT1 TSL 1 (best) BASIC20.58■□□□□ 0.88
LINC01560Q8TB33 HDGFL1-201ENST00000510882 2174 ntAPPRIS P1 BASIC20.58■□□□□ 0.88
LINC01560Q8TB33 PIK3R2-207ENST00000617130 2187 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
LINC01560Q8TB33 PSMG1-201ENST00000331573 2154 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
LINC01560Q8TB33 LRRC1-201ENST00000370882 808 ntTSL 3 BASIC20.57■□□□□ 0.88
LINC01560Q8TB33 TMUB1-202ENST00000392818 1563 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
LINC01560Q8TB33 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC20.57■□□□□ 0.88
LINC01560Q8TB33 AL136116.3-201ENST00000402907 1138 ntBASIC20.57■□□□□ 0.88
LINC01560Q8TB33 MAST4-205ENST00000406039 717 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
LINC01560Q8TB33 AQP1-202ENST00000409611 1140 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
LINC01560Q8TB33 NALT1-201ENST00000429224 738 ntTSL 5 BASIC20.57■□□□□ 0.88
LINC01560Q8TB33 HOMER3-203ENST00000433218 1418 ntAPPRIS ALT1 TSL 5 BASIC20.57■□□□□ 0.88
LINC01560Q8TB33 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC20.57■□□□□ 0.88
LINC01560Q8TB33 TOP1MT-208ENST00000519148 1868 ntTSL 2 BASIC20.57■□□□□ 0.88
LINC01560Q8TB33 MEIS3-204ENST00000558555 1715 ntAPPRIS ALT2 TSL 5 BASIC20.57■□□□□ 0.88
LINC01560Q8TB33 MIR6724-1-201ENST00000616420 92 ntBASIC20.57■□□□□ 0.88
LINC01560Q8TB33 MIR6724-2-201ENST00000616483 92 ntBASIC20.57■□□□□ 0.88
LINC01560Q8TB33 MIR6724-4-201ENST00000617390 92 ntBASIC20.57■□□□□ 0.88
LINC01560Q8TB33 MIR6724-3-201ENST00000622482 92 ntBASIC20.57■□□□□ 0.88
LINC01560Q8TB33 TSPAN10-203ENST00000574882 1837 ntAPPRIS P2 TSL 1 (best) BASIC20.57■□□□□ 0.88
LINC01560Q8TB33 POLE2-201ENST00000216367 1776 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
LINC01560Q8TB33 MOB4-204ENST00000409360 1447 ntTSL 5 BASIC20.56■□□□□ 0.88
LINC01560Q8TB33 FKBP8-213ENST00000608443 1849 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
LINC01560Q8TB33 LSM4-201ENST00000252816 986 ntTSL 2 BASIC20.56■□□□□ 0.88
LINC01560Q8TB33 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC20.56■□□□□ 0.88
LINC01560Q8TB33 CLK2-203ENST00000368361 2166 ntAPPRIS ALT1 TSL 1 (best) BASIC20.56■□□□□ 0.88
LINC01560Q8TB33 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC20.55■□□□□ 0.88
LINC01560Q8TB33 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC20.55■□□□□ 0.88
LINC01560Q8TB33 MIR638-201ENST00000385237 100 ntBASIC20.55■□□□□ 0.88
LINC01560Q8TB33 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC20.55■□□□□ 0.88
LINC01560Q8TB33 RALB-208ENST00000631312 311 ntTSL 5 BASIC20.55■□□□□ 0.88
LINC01560Q8TB33 Z98883.1-202ENST00000635107 1289 ntTSL 5 BASIC20.55■□□□□ 0.88
LINC01560Q8TB33 NR6A1-203ENST00000416460 1898 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
LINC01560Q8TB33 AC011511.4-201ENST00000586529 1850 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
LINC01560Q8TB33 TNFSF12-TNFSF13-201ENST00000293826 1816 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
LINC01560Q8TB33 ANKS3-203ENST00000450067 2272 ntTSL 5 BASIC20.55■□□□□ 0.88
LINC01560Q8TB33 FZD2-201ENST00000315323 2112 ntAPPRIS P1 BASIC20.54■□□□□ 0.88
LINC01560Q8TB33 PAOX-203ENST00000357296 1633 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
LINC01560Q8TB33 PDSS1-201ENST00000376215 1626 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
LINC01560Q8TB33 NPW-201ENST00000329610 498 ntAPPRIS P2 TSL 1 (best) BASIC20.54■□□□□ 0.88
LINC01560Q8TB33 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
LINC01560Q8TB33 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
LINC01560Q8TB33 CLTA-204ENST00000433436 1235 ntAPPRIS ALT1 TSL 1 (best) BASIC20.54■□□□□ 0.88
LINC01560Q8TB33 CLTA-209ENST00000538225 1181 ntTSL 2 BASIC20.54■□□□□ 0.88
LINC01560Q8TB33 EPHA10-211ENST00000540011 720 ntTSL 5 BASIC20.54■□□□□ 0.88
LINC01560Q8TB33 CLTA-210ENST00000540080 989 ntTSL 2 BASIC20.54■□□□□ 0.88
LINC01560Q8TB33 C12orf75-207ENST00000552457 689 ntTSL 5 BASIC20.54■□□□□ 0.88
LINC01560Q8TB33 PRSS21-201ENST00000005995 1101 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
LINC01560Q8TB33 AL356740.2-201ENST00000601559 647 ntBASIC20.54■□□□□ 0.88
LINC01560Q8TB33 AL117336.3-202ENST00000605499 489 ntTSL 3 BASIC20.54■□□□□ 0.88
LINC01560Q8TB33 AL139246.5-201ENST00000606645 996 ntBASIC20.54■□□□□ 0.88
LINC01560Q8TB33 AC005551.1-201ENST00000641816 493 ntAPPRIS P1 BASIC20.54■□□□□ 0.88
LINC01560Q8TB33 LINC01970-201ENST00000581489 1810 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
LINC01560Q8TB33 FOXO3B-201ENST00000395675 1928 ntBASIC20.54■□□□□ 0.88
LINC01560Q8TB33 ZNF821-201ENST00000313565 1874 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
LINC01560Q8TB33 PAIP1-208ENST00000514514 1603 ntTSL 5 BASIC20.53■□□□□ 0.88
LINC01560Q8TB33 TMEM134-202ENST00000393877 823 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
LINC01560Q8TB33 IL15RA-209ENST00000397255 759 ntAPPRIS ALT2 TSL 5 BASIC20.53■□□□□ 0.88
LINC01560Q8TB33 IL15RA-216ENST00000530685 660 ntTSL 5 BASIC20.53■□□□□ 0.88
LINC01560Q8TB33 SLC25A39-203ENST00000537904 1274 ntTSL 2 BASIC20.53■□□□□ 0.88
LINC01560Q8TB33 CALM1-203ENST00000544280 1064 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
LINC01560Q8TB33 SSSCA1-AS1-201ENST00000567594 614 ntBASIC20.53■□□□□ 0.88
LINC01560Q8TB33 MIR3621-201ENST00000580529 85 ntBASIC20.53■□□□□ 0.88
LINC01560Q8TB33 RDH14-201ENST00000381249 1587 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
LINC01560Q8TB33 DHRS11-215ENST00000618403 1598 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
LINC01560Q8TB33 TANGO2-214ENST00000447208 2086 ntTSL 3 BASIC20.53■□□□□ 0.88
LINC01560Q8TB33 ZDHHC16-207ENST00000393760 2014 ntAPPRIS P4 TSL 1 (best) BASIC20.53■□□□□ 0.88
LINC01560Q8TB33 JMJD1C-AS1-201ENST00000609436 1335 ntBASIC20.53■□□□□ 0.88
LINC01560Q8TB33 NDEL1-202ENST00000380025 2181 ntTSL 5 BASIC20.52■□□□□ 0.88
LINC01560Q8TB33 CDC16-211ENST00000628084 2058 ntTSL 5 BASIC20.52■□□□□ 0.88
LINC01560Q8TB33 AQP10-201ENST00000324978 1791 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
LINC01560Q8TB33 RPP38-201ENST00000378197 1457 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
LINC01560Q8TB33 ADRM1-205ENST00000620230 1361 ntTSL 5 BASIC20.52■□□□□ 0.88
LINC01560Q8TB33 EIF3J-203ENST00000535391 925 ntTSL 2 BASIC20.52■□□□□ 0.88
LINC01560Q8TB33 FLT1-202ENST00000539099 1911 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
LINC01560Q8TB33 UBALD1-201ENST00000283474 1413 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
LINC01560Q8TB33 C16orf87-201ENST00000285697 1585 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
LINC01560Q8TB33 RAB3IL1-202ENST00000394836 2284 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
LINC01560Q8TB33 EIF4EBP1-201ENST00000338825 1020 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
LINC01560Q8TB33 KRTAP5-1-201ENST00000382171 942 ntAPPRIS P1 BASIC20.51■□□□□ 0.87
LINC01560Q8TB33 AK3-203ENST00000447596 705 ntTSL 2 BASIC20.51■□□□□ 0.87
LINC01560Q8TB33 AL357078.1-201ENST00000448344 310 ntTSL 4 BASIC20.51■□□□□ 0.87
LINC01560Q8TB33 TMC6-218ENST00000591436 1155 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
LINC01560Q8TB33 EXOG-217ENST00000630638 197 ntTSL 5 BASIC20.51■□□□□ 0.87
LINC01560Q8TB33 AC093762.1-201ENST00000641981 837 ntAPPRIS P1 BASIC20.51■□□□□ 0.87
LINC01560Q8TB33 TP53I3-201ENST00000238721 1998 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
LINC01560Q8TB33 AF131216.4-201ENST00000638924 1588 ntBASIC20.51■□□□□ 0.87
LINC01560Q8TB33 SLC25A6-201ENST00000381401 2062 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
LINC01560Q8TB33 ATP6V0A2-209ENST00000613625 1620 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
LINC01560Q8TB33 C2CD4D-201ENST00000454109 1757 ntAPPRIS P1 TSL 2 BASIC20.5■□□□□ 0.87
LINC01560Q8TB33 MAGI2-215ENST00000628980 6212 ntTSL 5 BASIC20.5■□□□□ 0.87
LINC01560Q8TB33 SERTAD4-AS1-202ENST00000475406 591 ntTSL 2 BASIC20.5■□□□□ 0.87
LINC01560Q8TB33 KRAS-204ENST00000557334 1052 ntTSL 5 BASIC20.5■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 15.3 ms