Protein–RNA interactions for Protein: Q8N8F7

LSMEM1, Leucine-rich single-pass membrane protein 1, humanhuman

Predictions only

Length 131 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSMEM1Q8N8F7 AC133552.2-201ENST00000619106 1032 ntBASIC21.6■■□□□ 1.05
LSMEM1Q8N8F7 RIMKLB-205ENST00000535829 2236 ntAPPRIS P1 TSL 2 BASIC21.6■■□□□ 1.05
LSMEM1Q8N8F7 EED-207ENST00000528180 1745 ntTSL 5 BASIC21.6■■□□□ 1.05
LSMEM1Q8N8F7 NPHS2-202ENST00000367616 1670 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
LSMEM1Q8N8F7 ZC3H14-202ENST00000302216 2560 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
LSMEM1Q8N8F7 RASGEF1B-211ENST00000514050 537 ntTSL 2 BASIC21.59■■□□□ 1.05
LSMEM1Q8N8F7 PTH1R-206ENST00000430002 1947 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
LSMEM1Q8N8F7 CCR10-201ENST00000332438 1773 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
LSMEM1Q8N8F7 SLC30A3-201ENST00000233535 2260 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
LSMEM1Q8N8F7 MANF-204ENST00000528157 1153 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
LSMEM1Q8N8F7 CAPNS1-216ENST00000628306 1389 ntTSL 5 BASIC21.58■■□□□ 1.04
LSMEM1Q8N8F7 BTBD7-205ENST00000554565 2697 ntTSL 1 (best) BASIC21.58■■□□□ 1.04
LSMEM1Q8N8F7 SUGCT-209ENST00000628514 1591 ntAPPRIS P4 TSL 1 (best) BASIC21.57■■□□□ 1.04
LSMEM1Q8N8F7 BBC3-203ENST00000439096 1838 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
LSMEM1Q8N8F7 PICALM-202ENST00000393346 2340 ntAPPRIS P3 TSL 1 (best) BASIC21.57■■□□□ 1.04
LSMEM1Q8N8F7 TANGO2-204ENST00000401833 1920 ntTSL 5 BASIC21.57■■□□□ 1.04
LSMEM1Q8N8F7 NFKBIB-204ENST00000572515 1929 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
LSMEM1Q8N8F7 FAM83D-202ENST00000619850 2361 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
LSMEM1Q8N8F7 PITX3-202ENST00000539804 1187 ntAPPRIS P1 TSL 5 BASIC21.57■■□□□ 1.04
LSMEM1Q8N8F7 HDGFL2-210ENST00000621835 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC21.57■■□□□ 1.04
LSMEM1Q8N8F7 CYS1-201ENST00000381813 2738 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
LSMEM1Q8N8F7 ABHD17C-201ENST00000258884 2368 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
LSMEM1Q8N8F7 R3HDM4-203ENST00000587975 1765 ntTSL 3 BASIC21.56■■□□□ 1.04
LSMEM1Q8N8F7 MRPS7-203ENST00000579002 1638 ntTSL 2 BASIC21.56■■□□□ 1.04
LSMEM1Q8N8F7 TSPY4-202ENST00000426950 1179 ntAPPRIS P5 TSL 5 BASIC21.56■■□□□ 1.04
LSMEM1Q8N8F7 NUDT18-202ENST00000613958 1754 ntTSL 2 BASIC21.56■■□□□ 1.04
LSMEM1Q8N8F7 PREB-202ENST00000406567 1910 ntTSL 5 BASIC21.55■■□□□ 1.04
LSMEM1Q8N8F7 AC138647.1-201ENST00000427937 648 ntAPPRIS P1 TSL 5 BASIC21.55■■□□□ 1.04
LSMEM1Q8N8F7 AC107214.1-201ENST00000457303 559 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
LSMEM1Q8N8F7 LYL1-201ENST00000264824 1490 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
LSMEM1Q8N8F7 ADAD2-202ENST00000315906 1995 ntAPPRIS ALT2 TSL 1 (best) BASIC21.55■■□□□ 1.04
LSMEM1Q8N8F7 AGBL5-201ENST00000323064 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC21.55■■□□□ 1.04
LSMEM1Q8N8F7 KCTD5-201ENST00000301738 2482 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
LSMEM1Q8N8F7 ECEL1-202ENST00000409941 2322 ntAPPRIS ALT1 TSL 1 (best) BASIC21.55■■□□□ 1.04
LSMEM1Q8N8F7 RITA1-203ENST00000552495 1898 ntTSL 2 BASIC21.54■■□□□ 1.04
LSMEM1Q8N8F7 ZMYND19-201ENST00000298585 1375 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
LSMEM1Q8N8F7 BTBD19-201ENST00000409335 1214 ntTSL 5 BASIC21.54■■□□□ 1.04
LSMEM1Q8N8F7 LYPD6B-204ENST00000409876 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC21.54■■□□□ 1.04
LSMEM1Q8N8F7 MIR6089-201ENST00000616698 64 ntBASIC21.54■■□□□ 1.04
LSMEM1Q8N8F7 PTPRF-216ENST00000617451 1129 ntTSL 5 BASIC21.54■■□□□ 1.04
LSMEM1Q8N8F7 PLEKHO1-202ENST00000369126 1809 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
LSMEM1Q8N8F7 FAM124A-204ENST00000615498 2383 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
LSMEM1Q8N8F7 ARMC6-201ENST00000269932 2412 ntAPPRIS P1 TSL 5 BASIC21.54■■□□□ 1.04
LSMEM1Q8N8F7 ZNRF1-201ENST00000320619 2479 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
LSMEM1Q8N8F7 SRSF11-203ENST00000370951 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC21.53■■□□□ 1.04
LSMEM1Q8N8F7 RHOF-203ENST00000537171 1485 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
LSMEM1Q8N8F7 RAD51-210ENST00000557850 1397 ntTSL 2 BASIC21.53■■□□□ 1.04
LSMEM1Q8N8F7 DVL1-201ENST00000378888 3239 ntAPPRIS ALT1 TSL 5 BASIC21.53■■□□□ 1.04
LSMEM1Q8N8F7 SLC22A18-201ENST00000312221 1628 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
LSMEM1Q8N8F7 HMX2-201ENST00000339992 1628 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
LSMEM1Q8N8F7 PCMT1-202ENST00000367380 1628 ntTSL 2 BASIC21.53■■□□□ 1.04
LSMEM1Q8N8F7 PCMT1-211ENST00000544496 1628 ntTSL 2 BASIC21.53■■□□□ 1.04
LSMEM1Q8N8F7 DPF1-206ENST00000420980 2227 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
LSMEM1Q8N8F7 NDEL1-201ENST00000334527 2372 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
LSMEM1Q8N8F7 TSPAN4-202ENST00000397396 1332 ntTSL 5 BASIC21.53■■□□□ 1.04
LSMEM1Q8N8F7 LTB4R2-205ENST00000543919 1560 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
LSMEM1Q8N8F7 C7orf25-206ENST00000447342 1823 ntTSL 2 BASIC21.52■■□□□ 1.04
LSMEM1Q8N8F7 PSMG3-202ENST00000288607 1391 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
LSMEM1Q8N8F7 ZNF263-204ENST00000573578 1636 ntTSL 5 BASIC21.52■■□□□ 1.04
LSMEM1Q8N8F7 RARRES2P2-201ENST00000394842 485 ntBASIC21.52■■□□□ 1.04
LSMEM1Q8N8F7 SOCS2-202ENST00000536696 1065 ntAPPRIS P1 TSL 2 BASIC21.52■■□□□ 1.04
LSMEM1Q8N8F7 SSTR4-201ENST00000255008 1427 ntAPPRIS P1 BASIC21.52■■□□□ 1.04
LSMEM1Q8N8F7 ANKRD9-204ENST00000559651 1444 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
LSMEM1Q8N8F7 FEZ2-203ENST00000379245 2097 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
LSMEM1Q8N8F7 ZNF205-202ENST00000382192 2062 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
LSMEM1Q8N8F7 YWHAH-201ENST00000248975 1825 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
LSMEM1Q8N8F7 ARHGEF9-210ENST00000623517 2143 ntTSL 2 BASIC21.52■■□□□ 1.03
LSMEM1Q8N8F7 DYRK1B-201ENST00000323039 2535 ntAPPRIS P3 TSL 1 (best) BASIC21.51■■□□□ 1.03
LSMEM1Q8N8F7 AC105219.1-201ENST00000531565 1963 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
LSMEM1Q8N8F7 FAM98C-202ENST00000343358 1006 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
LSMEM1Q8N8F7 NKX2-5-204ENST00000521848 1027 ntTSL 2 BASIC21.51■■□□□ 1.03
LSMEM1Q8N8F7 HSD17B1P1-201ENST00000590052 955 ntBASIC21.51■■□□□ 1.03
LSMEM1Q8N8F7 UBE2E3-213ENST00000602959 909 ntAPPRIS P1 TSL 5 BASIC21.51■■□□□ 1.03
LSMEM1Q8N8F7 SLC22A31-206ENST00000614943 1860 ntTSL 5 BASIC21.51■■□□□ 1.03
LSMEM1Q8N8F7 HYI-213ENST00000583037 1322 ntTSL 5 BASIC21.51■■□□□ 1.03
LSMEM1Q8N8F7 ARSB-206ENST00000565165 1772 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
LSMEM1Q8N8F7 ZNF641-205ENST00000547026 1823 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
LSMEM1Q8N8F7 DGCR6-208ENST00000608842 1837 ntTSL 2 BASIC21.5■■□□□ 1.03
LSMEM1Q8N8F7 NAT14-201ENST00000205194 1536 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
LSMEM1Q8N8F7 RBMXL2-201ENST00000306904 1874 ntAPPRIS P1 BASIC21.5■■□□□ 1.03
LSMEM1Q8N8F7 PPP4C-201ENST00000279387 1407 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
LSMEM1Q8N8F7 FGD5-AS1-204ENST00000430166 1184 ntTSL 2 BASIC21.5■■□□□ 1.03
LSMEM1Q8N8F7 CASTOR2-201ENST00000616305 1257 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
LSMEM1Q8N8F7 SAP25-204ENST00000622764 1031 ntAPPRIS ALT2 TSL 5 BASIC21.5■■□□□ 1.03
LSMEM1Q8N8F7 SOX10-202ENST00000396884 2879 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
LSMEM1Q8N8F7 OSCAR-202ENST00000351806 1375 ntAPPRIS ALT2 TSL 1 (best) BASIC21.49■■□□□ 1.03
LSMEM1Q8N8F7 TSEN34-201ENST00000302937 2294 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
LSMEM1Q8N8F7 RABL6-204ENST00000371671 1580 ntAPPRIS ALT2 TSL 1 (best) BASIC21.49■■□□□ 1.03
LSMEM1Q8N8F7 FOXO3B-201ENST00000395675 1928 ntBASIC21.49■■□□□ 1.03
LSMEM1Q8N8F7 MPC1-201ENST00000341756 976 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
LSMEM1Q8N8F7 AL592293.1-201ENST00000502889 1188 ntBASIC21.49■■□□□ 1.03
LSMEM1Q8N8F7 MPC1-206ENST00000621630 977 ntAPPRIS ALT1 TSL 5 BASIC21.49■■□□□ 1.03
LSMEM1Q8N8F7 MPC1-207ENST00000621685 1192 ntTSL 5 BASIC21.49■■□□□ 1.03
LSMEM1Q8N8F7 ST3GAL5-214ENST00000638178 2034 ntTSL 5 BASIC21.49■■□□□ 1.03
LSMEM1Q8N8F7 MSX2-201ENST00000239243 2241 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
LSMEM1Q8N8F7 CEBPB-AS1-201ENST00000613921 2648 ntTSL 3 BASIC21.49■■□□□ 1.03
LSMEM1Q8N8F7 SLC9A3-AS1-207ENST00000607286 1357 ntTSL 5 BASIC21.48■■□□□ 1.03
LSMEM1Q8N8F7 SH2D3A-202ENST00000437152 2013 ntTSL 2 BASIC21.48■■□□□ 1.03
LSMEM1Q8N8F7 GJC1-209ENST00000592524 1837 ntAPPRIS P1 TSL 2 BASIC21.48■■□□□ 1.03
LSMEM1Q8N8F7 CENPVL1-201ENST00000602548 1620 ntAPPRIS P1 BASIC21.48■■□□□ 1.03
Retrieved 100 of 98,524 protein–RNA pairs in 83.1 ms