Protein–RNA interactions for Protein: Q8IW00

VSTM4, V-set and transmembrane domain-containing protein 4, humanhuman

Predictions only

Length 320 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VSTM4Q8IW00 RANBP10-206ENST00000602677 2374 ntTSL 5 BASIC25.85■■□□□ 1.73
VSTM4Q8IW00 POTEF-201ENST00000361163 1586 ntTSL 5 BASIC25.85■■□□□ 1.73
VSTM4Q8IW00 TADA2B-201ENST00000310074 4350 ntAPPRIS P1 TSL 1 (best) BASIC25.85■■□□□ 1.73
VSTM4Q8IW00 DACT1-201ENST00000335867 2571 ntAPPRIS P3 TSL 1 (best) BASIC25.85■■□□□ 1.73
VSTM4Q8IW00 HOXA10-206ENST00000613671 2175 ntTSL 5 BASIC25.85■■□□□ 1.73
VSTM4Q8IW00 ZFP91-CNTF-201ENST00000389919 2319 ntAPPRIS P5 TSL 2 BASIC25.85■■□□□ 1.73
VSTM4Q8IW00 FBXW4-201ENST00000331272 2483 ntAPPRIS P1 TSL 1 (best) BASIC25.85■■□□□ 1.73
VSTM4Q8IW00 CDH23-206ENST00000398842 1759 ntTSL 5 BASIC25.84■■□□□ 1.73
VSTM4Q8IW00 RAX-201ENST00000256852 2935 ntTSL 1 (best) BASIC25.84■■□□□ 1.73
VSTM4Q8IW00 IRX5-201ENST00000320990 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC25.84■■□□□ 1.73
VSTM4Q8IW00 PLEKHO1-202ENST00000369126 1809 ntTSL 1 (best) BASIC25.84■■□□□ 1.73
VSTM4Q8IW00 HYAL2-207ENST00000442581 2318 ntAPPRIS P1 TSL 2 BASIC25.84■■□□□ 1.73
VSTM4Q8IW00 MIR6089-201ENST00000616698 64 ntBASIC25.84■■□□□ 1.73
VSTM4Q8IW00 MPST-206ENST00000429360 1331 ntTSL 1 (best) BASIC25.84■■□□□ 1.73
VSTM4Q8IW00 LSM7-201ENST00000252622 529 ntAPPRIS P1 TSL 1 (best) BASIC25.83■■□□□ 1.73
VSTM4Q8IW00 GNB2-203ENST00000393926 1641 ntAPPRIS P1 TSL 5 BASIC25.83■■□□□ 1.73
VSTM4Q8IW00 PCYT2-203ENST00000538936 5147 ntTSL 1 (best) BASIC25.83■■□□□ 1.72
VSTM4Q8IW00 DACT3-201ENST00000300875 2526 ntTSL 1 (best) BASIC25.82■■□□□ 1.72
VSTM4Q8IW00 SLC9A3-203ENST00000514375 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC25.82■■□□□ 1.72
VSTM4Q8IW00 ZFPM1-201ENST00000319555 5380 ntAPPRIS P1 TSL 1 (best) BASIC25.82■■□□□ 1.72
VSTM4Q8IW00 CEBPD-201ENST00000408965 2178 ntAPPRIS P1 BASIC25.82■■□□□ 1.72
VSTM4Q8IW00 PCMT1-202ENST00000367380 1628 ntTSL 2 BASIC25.82■■□□□ 1.72
VSTM4Q8IW00 PCMT1-211ENST00000544496 1628 ntTSL 2 BASIC25.82■■□□□ 1.72
VSTM4Q8IW00 BIN1-207ENST00000357970 2497 ntTSL 1 (best) BASIC25.82■■□□□ 1.72
VSTM4Q8IW00 DUSP8P5-201ENST00000422884 1815 ntBASIC25.81■■□□□ 1.72
VSTM4Q8IW00 ZFAND4-205ENST00000374371 2283 ntTSL 5 BASIC25.81■■□□□ 1.72
VSTM4Q8IW00 NPHS2-202ENST00000367616 1670 ntTSL 1 (best) BASIC25.81■■□□□ 1.72
VSTM4Q8IW00 KCNS1-202ENST00000537075 2136 ntAPPRIS P1 TSL 1 (best) BASIC25.81■■□□□ 1.72
VSTM4Q8IW00 RNF223-201ENST00000453464 1902 ntAPPRIS P1 TSL 2 BASIC25.81■■□□□ 1.72
VSTM4Q8IW00 AGPS-202ENST00000409888 815 ntTSL 4 BASIC25.81■■□□□ 1.72
VSTM4Q8IW00 RPL27A-206ENST00000530022 878 ntTSL 1 (best) BASIC25.81■■□□□ 1.72
VSTM4Q8IW00 ZNF76-203ENST00000373953 2716 ntAPPRIS P1 TSL 1 (best) BASIC25.81■■□□□ 1.72
VSTM4Q8IW00 LSR-205ENST00000427250 1606 ntTSL 2 BASIC25.81■■□□□ 1.72
VSTM4Q8IW00 AMZ2-202ENST00000359904 2402 ntAPPRIS P1 TSL 2 BASIC25.8■■□□□ 1.72
VSTM4Q8IW00 ADSS-201ENST00000366535 2780 ntAPPRIS P1 TSL 1 (best) BASIC25.8■■□□□ 1.72
VSTM4Q8IW00 ST3GAL5-214ENST00000638178 2034 ntTSL 5 BASIC25.8■■□□□ 1.72
VSTM4Q8IW00 CCNJL-201ENST00000257536 1848 ntAPPRIS P1 TSL 2 BASIC25.8■■□□□ 1.72
VSTM4Q8IW00 IZUMO4-202ENST00000395301 1021 ntAPPRIS ALT2 TSL 1 (best) BASIC25.8■■□□□ 1.72
VSTM4Q8IW00 RNF166-209ENST00000567844 633 ntTSL 5 BASIC25.8■■□□□ 1.72
VSTM4Q8IW00 CR559946.2-201ENST00000623684 991 ntBASIC25.8■■□□□ 1.72
VSTM4Q8IW00 UBALD2-201ENST00000327490 1593 ntAPPRIS P1 TSL 1 (best) BASIC25.8■■□□□ 1.72
VSTM4Q8IW00 VEGFA-209ENST00000425836 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC25.8■■□□□ 1.72
VSTM4Q8IW00 SYT7-202ENST00000535826 1621 ntTSL 5 BASIC25.8■■□□□ 1.72
VSTM4Q8IW00 HSF1-201ENST00000400780 2105 ntTSL 5 BASIC25.79■■□□□ 1.72
VSTM4Q8IW00 DGAT1-201ENST00000332324 1473 ntTSL 5 BASIC25.79■■□□□ 1.72
VSTM4Q8IW00 IL15RA-214ENST00000525219 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC25.79■■□□□ 1.72
VSTM4Q8IW00 AMZ2P1-201ENST00000397713 2259 ntTSL 1 (best) BASIC25.79■■□□□ 1.72
VSTM4Q8IW00 BDH1-207ENST00000441275 1605 ntTSL 5 BASIC25.79■■□□□ 1.72
VSTM4Q8IW00 CLEC3B-202ENST00000428034 752 ntTSL 2 BASIC25.79■■□□□ 1.72
VSTM4Q8IW00 MTMR1-214ENST00000542156 1227 ntTSL 1 (best) BASIC25.79■■□□□ 1.72
VSTM4Q8IW00 AC073111.5-206ENST00000642087 859 ntAPPRIS P1 BASIC25.79■■□□□ 1.72
VSTM4Q8IW00 P2RX2-203ENST00000350048 1344 ntTSL 1 (best) BASIC25.79■■□□□ 1.72
VSTM4Q8IW00 PEBP1-201ENST00000261313 1697 ntAPPRIS P1 TSL 1 (best) BASIC25.78■■□□□ 1.72
VSTM4Q8IW00 KAT5-208ENST00000530446 1697 ntTSL 1 (best) BASIC25.78■■□□□ 1.72
VSTM4Q8IW00 ZNRF2P2-203ENST00000454624 420 ntBASIC25.78■■□□□ 1.72
VSTM4Q8IW00 TRIM52-AS1-203ENST00000509252 529 ntTSL 3 BASIC25.78■■□□□ 1.72
VSTM4Q8IW00 HOMER2-201ENST00000304231 1990 ntAPPRIS P4 TSL 5 BASIC25.78■■□□□ 1.72
VSTM4Q8IW00 DAZAP1-201ENST00000233078 2160 ntAPPRIS P2 TSL 1 (best) BASIC25.78■■□□□ 1.72
VSTM4Q8IW00 PDS5A-202ENST00000503396 2685 ntTSL 1 (best) BASIC25.77■■□□□ 1.72
VSTM4Q8IW00 CCSER2-202ENST00000359979 2066 ntTSL 1 (best) BASIC25.77■■□□□ 1.72
VSTM4Q8IW00 TTC36-201ENST00000302783 874 ntAPPRIS P1 TSL 1 (best) BASIC25.77■■□□□ 1.72
VSTM4Q8IW00 TRIM28-202ENST00000341753 2709 ntTSL 1 (best) BASIC25.77■■□□□ 1.72
VSTM4Q8IW00 ABCB10P4-201ENST00000566803 2184 ntBASIC25.76■■□□□ 1.71
VSTM4Q8IW00 KLC1-201ENST00000246489 2294 ntAPPRIS P1 TSL 5 BASIC25.76■■□□□ 1.71
VSTM4Q8IW00 KLC1-224ENST00000557450 2265 ntTSL 5 BASIC25.76■■□□□ 1.71
VSTM4Q8IW00 TMEM64-201ENST00000418210 4663 ntTSL 2 BASIC25.76■■□□□ 1.71
VSTM4Q8IW00 MDFIC-206ENST00000448022 484 ntTSL 2 BASIC25.76■■□□□ 1.71
VSTM4Q8IW00 C16orf87-201ENST00000285697 1585 ntAPPRIS P1 TSL 1 (best) BASIC25.76■■□□□ 1.71
VSTM4Q8IW00 FBXO45-201ENST00000311630 5899 ntAPPRIS P1 TSL 1 (best) BASIC25.76■■□□□ 1.71
VSTM4Q8IW00 PRMT5-213ENST00000553897 1857 ntTSL 2 BASIC25.75■■□□□ 1.71
VSTM4Q8IW00 ARHGDIA-203ENST00000541078 1517 ntAPPRIS P1 TSL 3 BASIC25.75■■□□□ 1.71
VSTM4Q8IW00 PTH1R-207ENST00000449590 2123 ntAPPRIS P1 TSL 1 (best) BASIC25.75■■□□□ 1.71
VSTM4Q8IW00 LTB4R2-205ENST00000543919 1560 ntAPPRIS P1 TSL 1 (best) BASIC25.74■■□□□ 1.71
VSTM4Q8IW00 HOXD-AS2-201ENST00000426965 927 ntTSL 1 (best) BASIC25.74■■□□□ 1.71
VSTM4Q8IW00 PFN2-211ENST00000489155 636 ntTSL 4 BASIC25.74■■□□□ 1.71
VSTM4Q8IW00 AL157400.5-201ENST00000507624 621 ntBASIC25.74■■□□□ 1.71
VSTM4Q8IW00 GRAMD1A-201ENST00000317991 2695 ntAPPRIS P3 TSL 1 (best) BASIC25.74■■□□□ 1.71
VSTM4Q8IW00 POU2F2-215ENST00000560398 1788 ntTSL 5 BASIC25.74■■□□□ 1.71
VSTM4Q8IW00 DGAT2-201ENST00000228027 2453 ntAPPRIS P1 TSL 1 (best) BASIC25.74■■□□□ 1.71
VSTM4Q8IW00 DTNB-201ENST00000288642 2464 ntAPPRIS ALT2 TSL 2 BASIC25.74■■□□□ 1.71
VSTM4Q8IW00 DTNB-208ENST00000406818 2474 ntAPPRIS P4 TSL 1 (best) BASIC25.74■■□□□ 1.71
VSTM4Q8IW00 PAOX-203ENST00000357296 1633 ntTSL 1 (best) BASIC25.74■■□□□ 1.71
VSTM4Q8IW00 FAM107B-211ENST00000468747 2633 ntAPPRIS P1 TSL 1 (best) BASIC25.73■■□□□ 1.71
VSTM4Q8IW00 CEBPB-AS1-201ENST00000613921 2648 ntTSL 3 BASIC25.73■■□□□ 1.71
VSTM4Q8IW00 ZNF444-211ENST00000592949 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC25.73■■□□□ 1.71
VSTM4Q8IW00 MACROD1-201ENST00000255681 1205 ntAPPRIS P1 TSL 1 (best) BASIC25.73■■□□□ 1.71
VSTM4Q8IW00 MLEC-202ENST00000412616 841 ntTSL 3 BASIC25.73■■□□□ 1.71
VSTM4Q8IW00 AC025884.2-201ENST00000553429 711 ntBASIC25.73■■□□□ 1.71
VSTM4Q8IW00 CCR10-201ENST00000332438 1773 ntAPPRIS P1 TSL 1 (best) BASIC25.73■■□□□ 1.71
VSTM4Q8IW00 SHD-204ENST00000599689 1729 ntTSL 5 BASIC25.73■■□□□ 1.71
VSTM4Q8IW00 RFC2-201ENST00000055077 1695 ntAPPRIS P1 TSL 1 (best) BASIC25.73■■□□□ 1.71
VSTM4Q8IW00 TMEM51-205ENST00000434578 1861 ntTSL 1 (best) BASIC25.72■■□□□ 1.71
VSTM4Q8IW00 PTGER1-201ENST00000292513 1421 ntAPPRIS P1 TSL 1 (best) BASIC25.72■■□□□ 1.71
VSTM4Q8IW00 POLE2-201ENST00000216367 1776 ntAPPRIS P1 TSL 1 (best) BASIC25.72■■□□□ 1.71
VSTM4Q8IW00 UBALD1-202ENST00000587615 799 ntTSL 2 BASIC25.72■■□□□ 1.71
VSTM4Q8IW00 GNG10-201ENST00000374293 1491 ntAPPRIS P1 TSL 1 (best) BASIC25.72■■□□□ 1.71
VSTM4Q8IW00 BARX1-202ENST00000401724 1323 ntTSL 1 (best) BASIC25.71■■□□□ 1.71
VSTM4Q8IW00 PITX2-209ENST00000557119 1889 ntTSL 2 BASIC25.71■■□□□ 1.71
VSTM4Q8IW00 ARMC6-201ENST00000269932 2412 ntAPPRIS P1 TSL 5 BASIC25.71■■□□□ 1.71
VSTM4Q8IW00 CUEDC1-202ENST00000407144 2190 ntAPPRIS P1 TSL 5 BASIC25.71■■□□□ 1.71
Retrieved 100 of 98,524 protein–RNA pairs in 26.5 ms