Protein–RNA interactions for Protein: Q86WB0

ZC3HC1, Nuclear-interacting partner of ALK, humanhuman

Known RBP Predictions only

Length 502 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZC3HC1Q86WB0 CAPNS1-216ENST00000628306 1389 ntTSL 5 BASIC23.5■■□□□ 1.35
ZC3HC1Q86WB0 ARSB-206ENST00000565165 1772 ntTSL 1 (best) BASIC23.5■■□□□ 1.35
ZC3HC1Q86WB0 TMEM202-AS1-202ENST00000565181 2325 ntBASIC23.49■■□□□ 1.35
ZC3HC1Q86WB0 AP2M1-202ENST00000382456 2091 ntAPPRIS ALT1 TSL 1 (best) BASIC23.49■■□□□ 1.35
ZC3HC1Q86WB0 EIF5A-208ENST00000573542 1089 ntAPPRIS P1 TSL 2 BASIC23.49■■□□□ 1.35
ZC3HC1Q86WB0 MIR6089-201ENST00000616698 64 ntBASIC23.49■■□□□ 1.35
ZC3HC1Q86WB0 BSPRY-201ENST00000374183 2339 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
ZC3HC1Q86WB0 RASL10A-201ENST00000216101 1490 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
ZC3HC1Q86WB0 PPP1R26-201ENST00000356818 4932 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
ZC3HC1Q86WB0 RABGGTA-202ENST00000399409 2265 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
ZC3HC1Q86WB0 LINC00543-201ENST00000567234 1845 ntBASIC23.48■■□□□ 1.35
ZC3HC1Q86WB0 RAB11FIP1-203ENST00000522727 1866 ntTSL 1 (best) BASIC23.48■■□□□ 1.35
ZC3HC1Q86WB0 ENDOG-201ENST00000372642 1172 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
ZC3HC1Q86WB0 ST3GAL5-214ENST00000638178 2034 ntTSL 5 BASIC23.48■■□□□ 1.35
ZC3HC1Q86WB0 IGFBP2-201ENST00000233809 1439 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
ZC3HC1Q86WB0 PARL-202ENST00000317096 1414 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
ZC3HC1Q86WB0 LYL1-201ENST00000264824 1490 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
ZC3HC1Q86WB0 P4HA3-201ENST00000331597 2274 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
ZC3HC1Q86WB0 LTB4R2-205ENST00000543919 1560 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
ZC3HC1Q86WB0 SLC9A3-201ENST00000264938 2584 ntAPPRIS P3 TSL 1 (best) BASIC23.47■■□□□ 1.35
ZC3HC1Q86WB0 TMED2-201ENST00000262225 2560 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
ZC3HC1Q86WB0 PCMT1-202ENST00000367380 1628 ntTSL 2 BASIC23.47■■□□□ 1.35
ZC3HC1Q86WB0 PCMT1-211ENST00000544496 1628 ntTSL 2 BASIC23.47■■□□□ 1.35
ZC3HC1Q86WB0 RAX2-202ENST00000555978 2145 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
ZC3HC1Q86WB0 CBARP-202ENST00000382477 2453 ntAPPRIS ALT2 TSL 5 BASIC23.47■■□□□ 1.35
ZC3HC1Q86WB0 MAZ-201ENST00000219782 2698 ntAPPRIS P4 TSL 1 (best) BASIC23.46■■□□□ 1.35
ZC3HC1Q86WB0 ID2-201ENST00000234091 2041 ntAPPRIS P1 TSL 1 (best) BASIC23.46■■□□□ 1.35
ZC3HC1Q86WB0 LSR-205ENST00000427250 1606 ntTSL 2 BASIC23.46■■□□□ 1.35
ZC3HC1Q86WB0 ALDH16A1-203ENST00000540132 2174 ntTSL 2 BASIC23.46■■□□□ 1.35
ZC3HC1Q86WB0 ANO8-204ENST00000630631 1905 ntTSL 5 BASIC23.46■■□□□ 1.35
ZC3HC1Q86WB0 FZD9-201ENST00000344575 2338 ntAPPRIS P1 BASIC23.45■■□□□ 1.35
ZC3HC1Q86WB0 RAB40B-201ENST00000269347 2189 ntTSL 2 BASIC23.45■■□□□ 1.35
ZC3HC1Q86WB0 YWHAH-201ENST00000248975 1825 ntAPPRIS P1 TSL 1 (best) BASIC23.45■■□□□ 1.34
ZC3HC1Q86WB0 TAZ-216ENST00000613002 1485 ntTSL 1 (best) BASIC23.45■■□□□ 1.34
ZC3HC1Q86WB0 SDF2L1-201ENST00000248958 865 ntAPPRIS P1 TSL 1 (best) BASIC23.45■■□□□ 1.34
ZC3HC1Q86WB0 AP000802.1-201ENST00000500537 1934 ntTSL 1 (best) BASIC23.45■■□□□ 1.34
ZC3HC1Q86WB0 TXNRD2-201ENST00000334363 1893 ntTSL 1 (best) BASIC23.45■■□□□ 1.34
ZC3HC1Q86WB0 ZFYVE28-202ENST00000503000 1874 ntTSL 1 (best) BASIC23.45■■□□□ 1.34
ZC3HC1Q86WB0 INPP5J-206ENST00000404453 1613 ntTSL 1 (best) BASIC23.44■■□□□ 1.34
ZC3HC1Q86WB0 RNPEP-202ENST00000367286 2282 ntTSL 5 BASIC23.44■■□□□ 1.34
ZC3HC1Q86WB0 GBX2-201ENST00000306318 2123 ntAPPRIS P1 TSL 1 (best) BASIC23.44■■□□□ 1.34
ZC3HC1Q86WB0 RIPPLY2-202ENST00000369689 664 ntAPPRIS P2 TSL 1 (best) BASIC23.44■■□□□ 1.34
ZC3HC1Q86WB0 PTPA-210ENST00000414510 1153 ntTSL 1 (best) BASIC23.44■■□□□ 1.34
ZC3HC1Q86WB0 CLPTM1-201ENST00000337392 2604 ntAPPRIS P1 TSL 1 (best) BASIC23.44■■□□□ 1.34
ZC3HC1Q86WB0 RBMXL2-201ENST00000306904 1874 ntAPPRIS P1 BASIC23.43■■□□□ 1.34
ZC3HC1Q86WB0 AGTR1-203ENST00000404754 2252 ntAPPRIS P1 TSL 1 (best) BASIC23.43■■□□□ 1.34
ZC3HC1Q86WB0 TMEM256-PLSCR3-204ENST00000573331 2557 ntAPPRIS P5 TSL 2 BASIC23.43■■□□□ 1.34
ZC3HC1Q86WB0 RBFA-201ENST00000262197 1219 ntTSL 1 (best) BASIC23.43■■□□□ 1.34
ZC3HC1Q86WB0 KRT18P10-201ENST00000388836 1287 ntBASIC23.43■■□□□ 1.34
ZC3HC1Q86WB0 AC009831.1-201ENST00000580420 1582 ntBASIC23.43■■□□□ 1.34
ZC3HC1Q86WB0 HSPBP1-201ENST00000255631 1768 ntAPPRIS P1 TSL 1 (best) BASIC23.42■■□□□ 1.34
ZC3HC1Q86WB0 ATAD3B-201ENST00000308647 2448 ntAPPRIS P1 TSL 1 (best) BASIC23.42■■□□□ 1.34
ZC3HC1Q86WB0 PCSK6-218ENST00000619160 3093 ntAPPRIS ALT2 TSL 1 (best) BASIC23.42■■□□□ 1.34
ZC3HC1Q86WB0 RPRML-201ENST00000322329 1093 ntAPPRIS P1 BASIC23.42■■□□□ 1.34
ZC3HC1Q86WB0 MAPK3-203ENST00000395199 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC23.42■■□□□ 1.34
ZC3HC1Q86WB0 MAPK3-205ENST00000395202 1008 ntTSL 1 (best) BASIC23.42■■□□□ 1.34
ZC3HC1Q86WB0 PSMG4-206ENST00000438998 838 ntAPPRIS P1 TSL 2 BASIC23.42■■□□□ 1.34
ZC3HC1Q86WB0 HES4-204ENST00000484667 667 ntTSL 3 BASIC23.42■■□□□ 1.34
ZC3HC1Q86WB0 OSBP-201ENST00000263847 5083 ntAPPRIS P1 TSL 1 (best) BASIC23.42■■□□□ 1.34
ZC3HC1Q86WB0 ST3GAL5-269ENST00000640992 2292 ntAPPRIS ALT2 TSL 5 BASIC23.42■■□□□ 1.34
ZC3HC1Q86WB0 AC141586.4-201ENST00000624558 1573 ntBASIC23.41■■□□□ 1.34
ZC3HC1Q86WB0 R3HDM4-201ENST00000361574 1815 ntAPPRIS P1 TSL 1 (best) BASIC23.41■■□□□ 1.34
ZC3HC1Q86WB0 SNF8-202ENST00000502492 2319 ntAPPRIS P3 TSL 1 (best) BASIC23.41■■□□□ 1.34
ZC3HC1Q86WB0 NTHL1-201ENST00000219066 1067 ntAPPRIS P1 TSL 1 (best) BASIC23.41■■□□□ 1.34
ZC3HC1Q86WB0 UBE2D2-205ENST00000505548 1113 ntTSL 1 (best) BASIC23.41■■□□□ 1.34
ZC3HC1Q86WB0 GOLGA7-201ENST00000357743 2027 ntAPPRIS P1 TSL 1 (best) BASIC23.41■■□□□ 1.34
ZC3HC1Q86WB0 NPAS3-206ENST00000548645 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC23.41■■□□□ 1.34
ZC3HC1Q86WB0 HMX2-201ENST00000339992 1628 ntAPPRIS P1 TSL 1 (best) BASIC23.41■■□□□ 1.34
ZC3HC1Q86WB0 MCUB-201ENST00000394650 2278 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
ZC3HC1Q86WB0 PXMP2-201ENST00000317479 957 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
ZC3HC1Q86WB0 TNFRSF4-201ENST00000379236 1068 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
ZC3HC1Q86WB0 TMEM120A-214ENST00000493111 1456 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
ZC3HC1Q86WB0 GIT1-210ENST00000579937 2798 ntTSL 2 BASIC23.4■■□□□ 1.34
ZC3HC1Q86WB0 LDHB-203ENST00000396076 1538 ntAPPRIS P1 TSL 5 BASIC23.39■■□□□ 1.34
ZC3HC1Q86WB0 TSPAN4-202ENST00000397396 1332 ntTSL 5 BASIC23.39■■□□□ 1.34
ZC3HC1Q86WB0 RNF126P1-201ENST00000567452 1320 ntBASIC23.39■■□□□ 1.34
ZC3HC1Q86WB0 ESR2-202ENST00000341099 2060 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.34
ZC3HC1Q86WB0 DOK3-205ENST00000501403 1872 ntAPPRIS P1 TSL 5 BASIC23.39■■□□□ 1.34
ZC3HC1Q86WB0 NR2F6-201ENST00000291442 2404 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.34
ZC3HC1Q86WB0 TMEM44-202ENST00000347147 2245 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.34
ZC3HC1Q86WB0 AC133552.2-201ENST00000619106 1032 ntBASIC23.39■■□□□ 1.33
ZC3HC1Q86WB0 DYRK3-203ENST00000367109 2163 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.33
ZC3HC1Q86WB0 ATP5A1-220ENST00000593152 2258 ntTSL 2 BASIC23.39■■□□□ 1.33
ZC3HC1Q86WB0 PGF-203ENST00000553716 1699 ntAPPRIS ALT2 TSL 1 (best) BASIC23.38■■□□□ 1.33
ZC3HC1Q86WB0 FOXO3B-201ENST00000395675 1928 ntBASIC23.38■■□□□ 1.33
ZC3HC1Q86WB0 ABHD17AP3-201ENST00000503096 1137 ntBASIC23.38■■□□□ 1.33
ZC3HC1Q86WB0 UBALD1-203ENST00000587649 707 ntTSL 3 BASIC23.38■■□□□ 1.33
ZC3HC1Q86WB0 MDFIC-208ENST00000614186 1068 ntTSL 1 (best) BASIC23.38■■□□□ 1.33
ZC3HC1Q86WB0 RABL6-204ENST00000371671 1580 ntAPPRIS ALT2 TSL 1 (best) BASIC23.38■■□□□ 1.33
ZC3HC1Q86WB0 TMEM51-205ENST00000434578 1861 ntTSL 1 (best) BASIC23.38■■□□□ 1.33
ZC3HC1Q86WB0 CCND3-223ENST00000616010 2047 ntTSL 5 BASIC23.38■■□□□ 1.33
ZC3HC1Q86WB0 CPLX1-201ENST00000304062 2181 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
ZC3HC1Q86WB0 RFC2-201ENST00000055077 1695 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
ZC3HC1Q86WB0 KLF15-201ENST00000296233 2574 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
ZC3HC1Q86WB0 LRRC24-201ENST00000529415 1758 ntAPPRIS P2 TSL 1 (best) BASIC23.37■■□□□ 1.33
ZC3HC1Q86WB0 ZNF263-204ENST00000573578 1636 ntTSL 5 BASIC23.37■■□□□ 1.33
ZC3HC1Q86WB0 RHOF-203ENST00000537171 1485 ntTSL 1 (best) BASIC23.37■■□□□ 1.33
ZC3HC1Q86WB0 MMD-201ENST00000262065 2735 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
ZC3HC1Q86WB0 WBP1-201ENST00000233615 1294 ntAPPRIS P2 TSL 1 (best) BASIC23.37■■□□□ 1.33
ZC3HC1Q86WB0 FGD5-AS1-204ENST00000430166 1184 ntTSL 2 BASIC23.37■■□□□ 1.33
Retrieved 100 of 98,524 protein–RNA pairs in 116.4 ms