Protein–RNA interactions for Protein: Q6P9H4

CNKSR3, Connector enhancer of kinase suppressor of ras 3, humanhuman

Predictions only

Length 555 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNKSR3Q6P9H4 TSPAN4-203ENST00000397397 1423 ntAPPRIS P1 TSL 1 (best) BASIC25.82■■□□□ 1.72
CNKSR3Q6P9H4 KDELR3-202ENST00000409006 931 ntTSL 1 (best) BASIC25.82■■□□□ 1.72
CNKSR3Q6P9H4 TMEM80-207ENST00000608174 800 ntTSL 5 BASIC25.82■■□□□ 1.72
CNKSR3Q6P9H4 DHRS11-215ENST00000618403 1598 ntAPPRIS P1 TSL 1 (best) BASIC25.82■■□□□ 1.72
CNKSR3Q6P9H4 U2AF1-204ENST00000459639 1675 ntTSL 1 (best) BASIC25.81■■□□□ 1.72
CNKSR3Q6P9H4 U2AF1L5-204ENST00000623375 1675 ntTSL 1 (best) BASIC25.81■■□□□ 1.72
CNKSR3Q6P9H4 EEF1D-203ENST00000419152 1452 ntAPPRIS ALT2 TSL 5 BASIC25.81■■□□□ 1.72
CNKSR3Q6P9H4 YTHDF1-201ENST00000370334 747 ntTSL 3 BASIC25.81■■□□□ 1.72
CNKSR3Q6P9H4 LIN7B-202ENST00000391864 582 ntTSL 3 BASIC25.81■■□□□ 1.72
CNKSR3Q6P9H4 CCZ1B-215ENST00000626257 2211 ntTSL 2 BASIC25.81■■□□□ 1.72
CNKSR3Q6P9H4 HNRNPD-203ENST00000353341 1585 ntAPPRIS ALT1 TSL 1 (best) BASIC25.81■■□□□ 1.72
CNKSR3Q6P9H4 EVA1C-203ENST00000401402 1558 ntTSL 5 BASIC25.81■■□□□ 1.72
CNKSR3Q6P9H4 WSB2-201ENST00000315436 2646 ntAPPRIS P1 TSL 1 (best) BASIC25.8■■□□□ 1.72
CNKSR3Q6P9H4 DCTPP1-201ENST00000319285 1222 ntAPPRIS P1 TSL 1 (best) BASIC25.8■■□□□ 1.72
CNKSR3Q6P9H4 SLC35A2-209ENST00000452555 1563 ntTSL 2 BASIC25.79■■□□□ 1.72
CNKSR3Q6P9H4 RASSF1-AS1-201ENST00000629828 790 ntBASIC25.79■■□□□ 1.72
CNKSR3Q6P9H4 NRM-201ENST00000259953 1755 ntAPPRIS P2 TSL 2 BASIC25.79■■□□□ 1.72
CNKSR3Q6P9H4 SERPING1-205ENST00000403558 2231 ntTSL 5 BASIC25.79■■□□□ 1.72
CNKSR3Q6P9H4 LINC01970-201ENST00000581489 1810 ntTSL 1 (best) BASIC25.79■■□□□ 1.72
CNKSR3Q6P9H4 SH3BP2-221ENST00000511747 2351 ntAPPRIS P3 TSL 1 (best) BASIC25.78■■□□□ 1.72
CNKSR3Q6P9H4 TFPT-201ENST00000391757 774 ntTSL 5 BASIC25.78■■□□□ 1.72
CNKSR3Q6P9H4 TFPT-202ENST00000391758 804 ntAPPRIS ALT2 TSL 1 (best) BASIC25.78■■□□□ 1.72
CNKSR3Q6P9H4 MIR17HG-201ENST00000400282 931 ntTSL 1 (best) BASIC25.78■■□□□ 1.72
CNKSR3Q6P9H4 MYL5-208ENST00000511290 781 ntTSL 1 (best) BASIC25.78■■□□□ 1.72
CNKSR3Q6P9H4 LYL1-201ENST00000264824 1490 ntAPPRIS P1 TSL 1 (best) BASIC25.78■■□□□ 1.72
CNKSR3Q6P9H4 CBR3-201ENST00000290354 1169 ntAPPRIS P1 TSL 1 (best) BASIC25.77■■□□□ 1.72
CNKSR3Q6P9H4 DNPH1-201ENST00000230431 657 ntAPPRIS P1 TSL 1 (best) BASIC25.76■■□□□ 1.71
CNKSR3Q6P9H4 ZNRF1-205ENST00000566250 1069 ntTSL 1 (best) BASIC25.76■■□□□ 1.71
CNKSR3Q6P9H4 ZNRF1-206ENST00000567962 1234 ntAPPRIS P1 TSL 1 (best) BASIC25.76■■□□□ 1.71
CNKSR3Q6P9H4 FGF22-201ENST00000215530 1311 ntAPPRIS P1 TSL 1 (best) BASIC25.76■■□□□ 1.71
CNKSR3Q6P9H4 PDSS1-201ENST00000376215 1626 ntAPPRIS P1 TSL 1 (best) BASIC25.76■■□□□ 1.71
CNKSR3Q6P9H4 R3HCC1-201ENST00000265806 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC25.76■■□□□ 1.71
CNKSR3Q6P9H4 SSR2-210ENST00000480567 895 ntAPPRIS P1 TSL 2 BASIC25.75■■□□□ 1.71
CNKSR3Q6P9H4 GPX4-213ENST00000622390 1002 ntTSL 5 BASIC25.75■■□□□ 1.71
CNKSR3Q6P9H4 APLP1-201ENST00000221891 2495 ntAPPRIS P1 TSL 1 (best) BASIC25.74■■□□□ 1.71
CNKSR3Q6P9H4 AC119427.1-201ENST00000633182 556 ntTSL 4 BASIC25.74■■□□□ 1.71
CNKSR3Q6P9H4 TMUB1-202ENST00000392818 1563 ntAPPRIS P1 TSL 1 (best) BASIC25.73■■□□□ 1.71
CNKSR3Q6P9H4 TTC3-225ENST00000540756 2025 ntTSL 2 BASIC25.73■■□□□ 1.71
CNKSR3Q6P9H4 FEV-201ENST00000295727 1879 ntAPPRIS P1 TSL 1 (best) BASIC25.73■■□□□ 1.71
CNKSR3Q6P9H4 CAPNS1-205ENST00000588780 1035 ntAPPRIS ALT2 TSL 5 BASIC25.73■■□□□ 1.71
CNKSR3Q6P9H4 HIST1H2AL-201ENST00000613174 393 ntAPPRIS P1 BASIC25.73■■□□□ 1.71
CNKSR3Q6P9H4 AC106739.1-201ENST00000617035 715 ntBASIC25.73■■□□□ 1.71
CNKSR3Q6P9H4 ACTR3B-201ENST00000256001 2216 ntAPPRIS P1 TSL 1 (best) BASIC25.73■■□□□ 1.71
CNKSR3Q6P9H4 LRRC10B-201ENST00000378075 2219 ntAPPRIS P1 BASIC25.73■■□□□ 1.71
CNKSR3Q6P9H4 PAOX-203ENST00000357296 1633 ntTSL 1 (best) BASIC25.73■■□□□ 1.71
CNKSR3Q6P9H4 FHL2-203ENST00000358129 1578 ntTSL 5 BASIC25.73■■□□□ 1.71
CNKSR3Q6P9H4 CCNJL-201ENST00000257536 1848 ntAPPRIS P1 TSL 2 BASIC25.72■■□□□ 1.71
CNKSR3Q6P9H4 SLC52A2-208ENST00000527078 1790 ntAPPRIS P1 TSL 5 BASIC25.72■■□□□ 1.71
CNKSR3Q6P9H4 GUK1-205ENST00000366722 850 ntTSL 3 BASIC25.72■■□□□ 1.71
CNKSR3Q6P9H4 EBPL-204ENST00000378272 766 ntTSL 3 BASIC25.72■■□□□ 1.71
CNKSR3Q6P9H4 AC009097.2-201ENST00000562763 465 ntTSL 2 BASIC25.72■■□□□ 1.71
CNKSR3Q6P9H4 LINC01632-201ENST00000615763 496 ntTSL 3 BASIC25.72■■□□□ 1.71
CNKSR3Q6P9H4 CASP9-202ENST00000348549 1621 ntTSL 1 (best) BASIC25.72■■□□□ 1.71
CNKSR3Q6P9H4 TMEM121-202ENST00000431372 1519 ntAPPRIS P1 TSL 5 BASIC25.72■■□□□ 1.71
CNKSR3Q6P9H4 GPR160-201ENST00000355897 2039 ntAPPRIS P1 TSL 1 (best) BASIC25.71■■□□□ 1.71
CNKSR3Q6P9H4 FSD1-204ENST00000597590 1634 ntTSL 5 BASIC25.71■■□□□ 1.71
CNKSR3Q6P9H4 FOXB2-201ENST00000376708 1299 ntAPPRIS P1 BASIC25.71■■□□□ 1.71
CNKSR3Q6P9H4 DUSP22-214ENST00000605315 867 ntTSL 5 BASIC25.71■■□□□ 1.71
CNKSR3Q6P9H4 MEIS3-204ENST00000558555 1715 ntAPPRIS ALT2 TSL 5 BASIC25.71■■□□□ 1.71
CNKSR3Q6P9H4 PHF11-202ENST00000378319 1359 ntAPPRIS P3 TSL 1 (best) BASIC25.7■■□□□ 1.71
CNKSR3Q6P9H4 SUSD3-202ENST00000375472 1195 ntAPPRIS P3 TSL 1 (best) BASIC25.7■■□□□ 1.7
CNKSR3Q6P9H4 PBX2P1-201ENST00000493219 1291 ntBASIC25.7■■□□□ 1.7
CNKSR3Q6P9H4 RPRD1A-207ENST00000588737 1264 ntTSL 2 BASIC25.7■■□□□ 1.7
CNKSR3Q6P9H4 FOXO3B-201ENST00000395675 1928 ntBASIC25.7■■□□□ 1.7
CNKSR3Q6P9H4 ARL4D-201ENST00000320033 1612 ntAPPRIS P1 TSL 1 (best) BASIC25.7■■□□□ 1.7
CNKSR3Q6P9H4 HES5-201ENST00000378453 1306 ntAPPRIS P1 TSL 1 (best) BASIC25.69■■□□□ 1.7
CNKSR3Q6P9H4 AC092343.1-201ENST00000500224 729 ntTSL 3 BASIC25.69■■□□□ 1.7
CNKSR3Q6P9H4 PLEKHO1-202ENST00000369126 1809 ntTSL 1 (best) BASIC25.69■■□□□ 1.7
CNKSR3Q6P9H4 SUMF1-202ENST00000383843 1447 ntTSL 2 BASIC25.69■■□□□ 1.7
CNKSR3Q6P9H4 MNX1-201ENST00000252971 2174 ntAPPRIS P3 TSL 1 (best) BASIC25.69■■□□□ 1.7
CNKSR3Q6P9H4 CA9-204ENST00000617161 1374 ntTSL 1 (best) BASIC25.69■■□□□ 1.7
CNKSR3Q6P9H4 PSKH1-202ENST00000570631 1509 ntTSL 1 (best) BASIC25.68■■□□□ 1.7
CNKSR3Q6P9H4 CTSA-203ENST00000372459 1972 ntTSL 1 (best) BASIC25.68■■□□□ 1.7
CNKSR3Q6P9H4 CRYAA-201ENST00000291554 1139 ntAPPRIS P1 TSL 1 (best) BASIC25.68■■□□□ 1.7
CNKSR3Q6P9H4 KRTAP5-4-201ENST00000399682 1181 ntAPPRIS P5 BASIC25.68■■□□□ 1.7
CNKSR3Q6P9H4 SNX5-217ENST00000606557 1087 ntBASIC25.68■■□□□ 1.7
CNKSR3Q6P9H4 MIR6722-201ENST00000617286 78 ntBASIC25.68■■□□□ 1.7
CNKSR3Q6P9H4 FEZF2-202ENST00000475839 1918 ntAPPRIS P1 TSL 1 (best) BASIC25.67■■□□□ 1.7
CNKSR3Q6P9H4 RRAD-201ENST00000299759 1569 ntAPPRIS P1 TSL 1 (best) BASIC25.67■■□□□ 1.7
CNKSR3Q6P9H4 PQLC1-202ENST00000357575 2475 ntAPPRIS ALT1 TSL 5 BASIC25.67■■□□□ 1.7
CNKSR3Q6P9H4 MRPL41-201ENST00000371443 1262 ntAPPRIS P1 TSL 1 (best) BASIC25.67■■□□□ 1.7
CNKSR3Q6P9H4 ZNRF2P3-201ENST00000424200 374 ntBASIC25.67■■□□□ 1.7
CNKSR3Q6P9H4 CLTA-206ENST00000466396 695 ntTSL 2 BASIC25.67■■□□□ 1.7
CNKSR3Q6P9H4 ERRFI1-203ENST00000469499 995 ntTSL 3 BASIC25.67■■□□□ 1.7
CNKSR3Q6P9H4 SHF-208ENST00000560734 1731 ntTSL 3 BASIC25.67■■□□□ 1.7
CNKSR3Q6P9H4 PTOV1-220ENST00000601675 1587 ntAPPRIS P1 TSL 1 (best) BASIC25.67■■□□□ 1.7
CNKSR3Q6P9H4 HOXA11-AS1_1.1-201ENST00000613939 98 ntBASIC25.67■■□□□ 1.7
CNKSR3Q6P9H4 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC25.67■■□□□ 1.7
CNKSR3Q6P9H4 MATK-201ENST00000310132 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC25.67■■□□□ 1.7
CNKSR3Q6P9H4 ZNF653-201ENST00000293771 2240 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
CNKSR3Q6P9H4 RAB33A-201ENST00000257017 1258 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
CNKSR3Q6P9H4 NDUFS3-206ENST00000528192 561 ntTSL 5 BASIC25.66■■□□□ 1.7
CNKSR3Q6P9H4 NRL-205ENST00000560550 788 ntTSL 1 (best) BASIC25.66■■□□□ 1.7
CNKSR3Q6P9H4 AC142381.2-201ENST00000566120 298 ntBASIC25.66■■□□□ 1.7
CNKSR3Q6P9H4 PICSAR-201ENST00000615826 733 ntTSL 1 (best) BASIC25.66■■□□□ 1.7
CNKSR3Q6P9H4 KLC3-201ENST00000391946 1780 ntAPPRIS P2 TSL 1 (best) BASIC25.66■■□□□ 1.7
CNKSR3Q6P9H4 UCK1-204ENST00000372215 2167 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
CNKSR3Q6P9H4 CCDC107-203ENST00000378407 899 ntAPPRIS ALT2 TSL 2 BASIC25.65■■□□□ 1.7
CNKSR3Q6P9H4 ACAA1-220ENST00000627515 1862 ntTSL 5 BASIC25.65■■□□□ 1.7
CNKSR3Q6P9H4 ZNF784-202ENST00000591479 1559 ntTSL 1 (best) BASIC25.65■■□□□ 1.7
Retrieved 100 of 98,524 protein–RNA pairs in 18.1 ms