Protein–RNA interactions for Protein: Q5TH69

ARFGEF3, Brefeldin A-inhibited guanine nucleotide-exchange protein 3, humanhuman

Predictions only

Length 2,177 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ARFGEF3Q5TH69 VRK2-202ENST00000412104 1916 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
ARFGEF3Q5TH69 SENP5-202ENST00000419026 973 ntTSL 3 BASIC20.14■□□□□ 0.81
ARFGEF3Q5TH69 DRAM2-211ENST00000539140 1883 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
ARFGEF3Q5TH69 AC010501.1-201ENST00000606270 1962 ntBASIC20.13■□□□□ 0.81
ARFGEF3Q5TH69 SPOCK3-221ENST00000512648 1456 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
ARFGEF3Q5TH69 FHL2-203ENST00000358129 1578 ntTSL 5 BASIC20.13■□□□□ 0.81
ARFGEF3Q5TH69 NPDC1-201ENST00000371600 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
ARFGEF3Q5TH69 HNRNPD-203ENST00000353341 1585 ntAPPRIS ALT1 TSL 1 (best) BASIC20.13■□□□□ 0.81
ARFGEF3Q5TH69 TST-201ENST00000249042 1211 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
ARFGEF3Q5TH69 DNAJC4-202ENST00000321685 1288 ntAPPRIS P3 TSL 1 (best) BASIC20.12■□□□□ 0.81
ARFGEF3Q5TH69 AL356441.2-201ENST00000443009 864 ntBASIC20.12■□□□□ 0.81
ARFGEF3Q5TH69 FAM173A-207ENST00000569529 1052 ntAPPRIS P3 TSL 1 (best) BASIC20.12■□□□□ 0.81
ARFGEF3Q5TH69 GRAMD4P7-201ENST00000578182 1232 ntBASIC20.12■□□□□ 0.81
ARFGEF3Q5TH69 DNAJC4-212ENST00000628077 938 ntTSL 5 BASIC20.12■□□□□ 0.81
ARFGEF3Q5TH69 MRPL4-207ENST00000590669 1423 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
ARFGEF3Q5TH69 UNC93B8-201ENST00000511903 705 ntBASIC20.12■□□□□ 0.81
ARFGEF3Q5TH69 AC011551.1-201ENST00000614101 683 ntBASIC20.12■□□□□ 0.81
ARFGEF3Q5TH69 TMUB1-201ENST00000297533 1353 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
ARFGEF3Q5TH69 TMIE-201ENST00000326431 1824 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
ARFGEF3Q5TH69 ARHGEF7-205ENST00000375739 5375 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
ARFGEF3Q5TH69 WIPI2-204ENST00000404704 1663 ntTSL 5 BASIC20.12■□□□□ 0.81
ARFGEF3Q5TH69 CCKBR-201ENST00000334619 2121 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
ARFGEF3Q5TH69 CCR10-201ENST00000332438 1773 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
ARFGEF3Q5TH69 BAMBI-201ENST00000375533 1877 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
ARFGEF3Q5TH69 MT1E-201ENST00000306061 704 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
ARFGEF3Q5TH69 ZNF180-205ENST00000587047 525 ntTSL 4 BASIC20.11■□□□□ 0.81
ARFGEF3Q5TH69 SLC35A2-209ENST00000452555 1563 ntTSL 2 BASIC20.11■□□□□ 0.81
ARFGEF3Q5TH69 GATA4-209ENST00000622443 1982 ntTSL 5 BASIC20.11■□□□□ 0.81
ARFGEF3Q5TH69 FBXL6-202ENST00000455319 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
ARFGEF3Q5TH69 TRAPPC5-202ENST00000426877 765 ntAPPRIS P1 TSL 2 BASIC20.11■□□□□ 0.81
ARFGEF3Q5TH69 ERO1A-211ENST00000629528 998 ntTSL 5 BASIC20.11■□□□□ 0.81
ARFGEF3Q5TH69 NEUROG3-201ENST00000242462 1376 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
ARFGEF3Q5TH69 LINC01970-201ENST00000581489 1810 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
ARFGEF3Q5TH69 POLE2-201ENST00000216367 1776 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
ARFGEF3Q5TH69 TST-202ENST00000403892 1797 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
ARFGEF3Q5TH69 MROH6-211ENST00000534459 1789 ntAPPRIS ALT2 TSL 2 BASIC20.1■□□□□ 0.81
ARFGEF3Q5TH69 PRELID1-201ENST00000303204 1261 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
ARFGEF3Q5TH69 FEZ2-204ENST00000405912 1931 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
ARFGEF3Q5TH69 RHOQ-201ENST00000238738 2975 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
ARFGEF3Q5TH69 LINC00588-201ENST00000521663 1875 ntTSL 2 BASIC20.1■□□□□ 0.81
ARFGEF3Q5TH69 MADCAM1-202ENST00000346144 1309 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
ARFGEF3Q5TH69 LYPLA1-215ENST00000618914 2482 ntTSL 5 BASIC20.1■□□□□ 0.81
ARFGEF3Q5TH69 TWF2-201ENST00000305533 1718 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
ARFGEF3Q5TH69 P2RX2-205ENST00000352418 1200 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
ARFGEF3Q5TH69 MAGI2-AS3-201ENST00000414797 1072 ntTSL 2 BASIC20.1■□□□□ 0.81
ARFGEF3Q5TH69 TRAF7-203ENST00000565383 799 ntTSL 5 BASIC20.1■□□□□ 0.81
ARFGEF3Q5TH69 SERF1A-202ENST00000354833 1889 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
ARFGEF3Q5TH69 SERF1B-201ENST00000380750 1889 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
ARFGEF3Q5TH69 TSPAN4-203ENST00000397397 1423 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
ARFGEF3Q5TH69 AC092803.2-201ENST00000564287 1899 ntBASIC20.09■□□□□ 0.81
ARFGEF3Q5TH69 U2AF1-202ENST00000380276 940 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
ARFGEF3Q5TH69 SYCE1-204ENST00000432597 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
ARFGEF3Q5TH69 KRT16P3-201ENST00000439127 1283 ntBASIC20.09■□□□□ 0.81
ARFGEF3Q5TH69 PACS2-201ENST00000325438 3708 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
ARFGEF3Q5TH69 CACNA1H-201ENST00000348261 8208 ntAPPRIS P4 TSL 1 (best) BASIC20.09■□□□□ 0.81
ARFGEF3Q5TH69 AC021242.3-201ENST00000607598 1377 ntBASIC20.09■□□□□ 0.81
ARFGEF3Q5TH69 ARHGEF7-206ENST00000375741 5525 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
ARFGEF3Q5TH69 GUCD1-202ENST00000402766 865 ntTSL 2 BASIC20.08■□□□□ 0.81
ARFGEF3Q5TH69 DVL1-201ENST00000378888 3239 ntAPPRIS ALT1 TSL 5 BASIC20.08■□□□□ 0.8
ARFGEF3Q5TH69 ROM1-201ENST00000278833 1878 ntAPPRIS P2 TSL 1 (best) BASIC20.08■□□□□ 0.8
ARFGEF3Q5TH69 RCCD1-203ENST00000555155 1871 ntAPPRIS ALT1 TSL 5 BASIC20.08■□□□□ 0.8
ARFGEF3Q5TH69 HMGA2-202ENST00000393577 611 ntTSL 3 BASIC20.08■□□□□ 0.8
ARFGEF3Q5TH69 CUL4A-209ENST00000488558 1111 ntTSL 3 BASIC20.08■□□□□ 0.8
ARFGEF3Q5TH69 ANKS3-204ENST00000585773 1946 ntTSL 2 BASIC20.08■□□□□ 0.8
ARFGEF3Q5TH69 KAT5-208ENST00000530446 1697 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
ARFGEF3Q5TH69 KAZALD1-201ENST00000370200 1913 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
ARFGEF3Q5TH69 AC009531.1-201ENST00000442323 580 ntTSL 4 BASIC20.07■□□□□ 0.8
ARFGEF3Q5TH69 C16orf87-201ENST00000285697 1585 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
ARFGEF3Q5TH69 FKBP8-213ENST00000608443 1849 ntAPPRIS P3 TSL 1 (best) BASIC20.07■□□□□ 0.8
ARFGEF3Q5TH69 HMX3-201ENST00000357878 1173 ntAPPRIS P1 TSL 2 BASIC20.07■□□□□ 0.8
ARFGEF3Q5TH69 CHKB-AS1-201ENST00000380711 578 ntTSL 2 BASIC20.07■□□□□ 0.8
ARFGEF3Q5TH69 PRKAR1B-203ENST00000403562 1917 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
ARFGEF3Q5TH69 ARTN-203ENST00000414809 1943 ntAPPRIS P4 TSL 3 BASIC20.07■□□□□ 0.8
ARFGEF3Q5TH69 PYCR1-203ENST00000402252 1346 ntTSL 2 BASIC20.06■□□□□ 0.8
ARFGEF3Q5TH69 KAT8-202ENST00000448516 1789 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
ARFGEF3Q5TH69 FEZ1-202ENST00000366139 1053 ntTSL 2 BASIC20.06■□□□□ 0.8
ARFGEF3Q5TH69 AC073111.5-204ENST00000498682 1167 ntAPPRIS P1 TSL 2 BASIC20.06■□□□□ 0.8
ARFGEF3Q5TH69 MIR663AHG-227ENST00000608084 765 ntTSL 5 BASIC20.06■□□□□ 0.8
ARFGEF3Q5TH69 CCDC194-202ENST00000636079 705 ntAPPRIS P1 TSL 5 BASIC20.06■□□□□ 0.8
ARFGEF3Q5TH69 MAPKAP1-207ENST00000394060 1586 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
ARFGEF3Q5TH69 TAZ-213ENST00000601016 1889 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
ARFGEF3Q5TH69 PFN2-210ENST00000481767 1620 ntTSL 2 BASIC20.06■□□□□ 0.8
ARFGEF3Q5TH69 LMTK3-202ENST00000600059 5113 ntAPPRIS ALT2 TSL 2 BASIC20.06■□□□□ 0.8
ARFGEF3Q5TH69 TMEM125-202ENST00000439858 1786 ntAPPRIS P1 TSL 2 BASIC20.06■□□□□ 0.8
ARFGEF3Q5TH69 PCMTD2-202ENST00000299468 1049 ntTSL 5 BASIC20.05■□□□□ 0.8
ARFGEF3Q5TH69 NBPF26-209ENST00000624419 1133 ntTSL 5 BASIC20.05■□□□□ 0.8
ARFGEF3Q5TH69 TMEM260-202ENST00000538838 1638 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
ARFGEF3Q5TH69 SRP68-202ENST00000539137 2386 ntTSL 2 BASIC20.05■□□□□ 0.8
ARFGEF3Q5TH69 MBD2-201ENST00000256429 5188 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
ARFGEF3Q5TH69 SDS-201ENST00000257549 1606 ntAPPRIS P1 TSL 2 BASIC20.05■□□□□ 0.8
ARFGEF3Q5TH69 AC092028.1-203ENST00000608262 953 ntBASIC20.05■□□□□ 0.8
ARFGEF3Q5TH69 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC20.05■□□□□ 0.8
ARFGEF3Q5TH69 LRRC14B-201ENST00000328278 1573 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
ARFGEF3Q5TH69 DDX42-201ENST00000359353 2783 ntTSL 5 BASIC20.04■□□□□ 0.8
ARFGEF3Q5TH69 C11orf80-204ENST00000525908 2135 ntAPPRIS P3 TSL 2 BASIC20.04■□□□□ 0.8
ARFGEF3Q5TH69 AF131216.4-201ENST00000638924 1588 ntBASIC20.04■□□□□ 0.8
ARFGEF3Q5TH69 CEND1-201ENST00000330106 1649 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
ARFGEF3Q5TH69 RNF166-201ENST00000312838 1883 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
ARFGEF3Q5TH69 MCRIP1-202ENST00000457257 942 ntTSL 3 BASIC20.04■□□□□ 0.8
ARFGEF3Q5TH69 NPB-202ENST00000573081 2154 ntAPPRIS ALT2 BASIC20.03■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 17.7 ms